FFCP PHASE1:Hg19::chr22:30968839..30968859,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9514 | |EntrezGene=9514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24240 | |HGNC=24240 | ||
|TSSclassifier=strong | |||
|UniProt=C9JN55,C9J2X7,C9JTV3,C9K037,C9JIS3 | |UniProt=C9JN55,C9J2X7,C9JTV3,C9K037,C9JIS3 | ||
|association_with_transcript=0bp_to_ENST00000411821,ENST00000416358,ENST00000423371,ENST00000445645,ENST00000448604_5end | |association_with_transcript=0bp_to_ENST00000411821,ENST00000416358,ENST00000423371,ENST00000445645,ENST00000448604_5end | ||
|cluster_id=chr22:30968839..30968859,- | |||
|coexpression_cluster_id=C182 | |||
|description=CAGE_peak_6_at_GAL3ST1_5end | |description=CAGE_peak_6_at_GAL3ST1_5end | ||
|id=chr22:30968839..30968859,- | |id=chr22:30968839..30968859,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.82e-21;1!UBERON:0003918;1.49e-18;10!UBERON:0007687;1.49e-18;10!UBERON:0003104;3.67e-16;31!UBERON:0004161;3.14e-08;11!UBERON:0009497;4.26e-07;13 | |||
|ontology_enrichment_disease=DOID:4468!3.13e-12!2 | |ontology_enrichment_disease=DOID:4468!3.13e-12!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!3.94e-13!4;UBERON:0002435!3.94e-13!4;UBERON:0000204!3.94e-13!4;UBERON:0010082!3.94e-13!4;UBERON:0005172!1.73e-10!55;UBERON:0005173!1.73e-10!55;UBERON:0002308!4.95e-10!9;UBERON:0000125!4.95e-10!9;UBERON:0002417!2.98e-09!61;UBERON:0000916!2.98e-09!61;UBERON:0005383!1.73e-08!3;UBERON:0005382!1.73e-08!3;UBERON:0009497!1.04e-07!25;UBERON:0000015!1.04e-07!25;UBERON:0002423!1.04e-07!25;UBERON:0006235!1.04e-07!25;UBERON:0004161!1.04e-07!25;UBERON:0009663!1.05e-07!7;UBERON:0001874!5.37e-07!1;UBERON:0002020!8.85e-07!34;UBERON:0003528!8.85e-07!34 | |ontology_enrichment_uberon=UBERON:0000369!3.94e-13!4;UBERON:0002435!3.94e-13!4;UBERON:0000204!3.94e-13!4;UBERON:0010082!3.94e-13!4;UBERON:0005172!1.73e-10!55;UBERON:0005173!1.73e-10!55;UBERON:0002308!4.95e-10!9;UBERON:0000125!4.95e-10!9;UBERON:0002417!2.98e-09!61;UBERON:0000916!2.98e-09!61;UBERON:0005383!1.73e-08!3;UBERON:0005382!1.73e-08!3;UBERON:0009497!1.04e-07!25;UBERON:0000015!1.04e-07!25;UBERON:0002423!1.04e-07!25;UBERON:0006235!1.04e-07!25;UBERON:0004161!1.04e-07!25;UBERON:0009663!1.05e-07!7;UBERON:0001874!5.37e-07!1;UBERON:0002020!8.85e-07!34;UBERON:0003528!8.85e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0005172;5.03e-09;52!UBERON:0005173;5.03e-09;52!UBERON:0002417;9.79e-09;58!UBERON:0000916;9.79e-09;58!UBERON:0002113;4.15e-08;24!UBERON:0011143;4.15e-08;24!UBERON:0002110;5.54e-08;3!UBERON:0002423;8.92e-08;25!UBERON:0000489;8.34e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.56e-13,54;UBERON:0005173,3.56e-13,54;UBERON:0002417,7.50e-12,60;UBERON:0000916,7.50e-12,60;UBERON:0005177,2.17e-09,101;UBERON:0009569,1.94e-08,112;UBERON:0002110,5.93e-08,3;UBERON:0006242,5.93e-08,3;UBERON:0009497,8.82e-08,25;UBERON:0000015,8.82e-08,25;UBERON:0002423,8.82e-08,25;UBERON:0006235,8.82e-08,25;UBERON:0004161,8.82e-08,25;UBERON:0002113,1.60e-07,26;UBERON:0003918,1.60e-07,26;UBERON:0011143,1.60e-07,26;UBERON:0005095,1.60e-07,26;UBERON:0007687,1.60e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,4.5113357896703,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12287187374446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,1.18208560948797,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30027555648885,0.129282956361551,0,4.44825778499256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30617366729152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,50.742983936376,5.25526856675755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,6.94567422971502,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,4.5113357896703,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12287187374446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,1.18208560948797,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30027555648885,0.129282956361551,0,4.44825778499256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30617366729152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,50.742983936376,5.25526856675755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,6.94567422971502,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p6@GAL3ST1 | |short_description=p6@GAL3ST1 | ||
}} | }} |
Latest revision as of 18:28, 19 September 2015
Short description: | p6@GAL3ST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GAL3ST1_5end |
Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
Association with transcript: | 0bp_to_ENST00000411821, ENST00000416358, ENST00000423371, ENST00000445645, ENST00000448604_5end |
EntrezGene: | GAL3ST1 |
HGNC: | 24240 |
UniProt: | C9JN55C9J2X7C9JTV3C9K037C9JIS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 3.56e-13 | 54 |
abdominal segment element | 3.56e-13 | 54 |
abdominal segment of trunk | 7.50e-12 | 60 |
abdomen | 7.50e-12 | 60 |
trunk region element | 2.17e-09 | 101 |
subdivision of trunk | 1.94e-08 | 112 |
gallbladder | 5.93e-08 | 3 |
gall bladder primordium | 5.93e-08 | 3 |
epithelium of foregut-midgut junction | 8.82e-08 | 25 |
anatomical boundary | 8.82e-08 | 25 |
hepatobiliary system | 8.82e-08 | 25 |
foregut-midgut junction | 8.82e-08 | 25 |
septum transversum | 8.82e-08 | 25 |
kidney | 1.60e-07 | 26 |
kidney mesenchyme | 1.60e-07 | 26 |
upper urinary tract | 1.60e-07 | 26 |
kidney rudiment | 1.60e-07 | 26 |
kidney field | 1.60e-07 | 26 |