FFCP PHASE1:Hg19::chr17:6338428..6338463,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:6338428..6338463,-
|short_description=p1@AIPL1
|description=CAGE_peak_1_at_AIPL1_5end
|association_with_transcript=0bp_to_ENST00000444243_5end
|EntrezGen...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23746 | |EntrezGene=23746 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=359 | |HGNC=359 | ||
|TSSclassifier=strong | |||
|UniProt=F5H150 | |UniProt=F5H150 | ||
|association_with_transcript=0bp_to_ENST00000444243_5end | |||
|cluster_id=chr17:6338428..6338463,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_AIPL1_5end | |||
|id=chr17:6338428..6338463,- | |||
|ontology_enrichment_celltype=CL:0002322!7.40e-32!5;CL:0000039!7.58e-15!7;CL:0000586!7.58e-15!7;CL:0000540!8.03e-10!6;CL:0000031!8.03e-10!6;CL:0000404!8.03e-10!6;CL:0000064!4.54e-09!3;CL:0005012!4.54e-09!3;CL:0000067!4.54e-09!3;CL:0002304!4.54e-09!3;CL:0000133!1.58e-08!59;CL:0000221!2.53e-08!71;CL:0000075!6.82e-08!27;CL:0000710!1.20e-07!20;CL:0000047!1.75e-07!8;CL:0002336!2.47e-07!1;CL:0002261!2.47e-07!1;CL:0002170!2.47e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.84e-60;5!CL:0002321;2.92e-20;15!CL:0000039;1.63e-16;7!CL:0000586;1.63e-16;7!CL:0000148;1.38e-11;10!CL:0000147;1.96e-08;14!CL:0000075;1.56e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.35e-60,5;CL:0000039,1.87e-16,7;CL:0000586,1.87e-16,7;CL:0000148,1.46e-11,10;CL:0000541,1.46e-11,10;CL:0000147,2.04e-08,14;CL:0000075,1.60e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.99e-18;3!UBERON:0009117;9.58e-12;10!UBERON:0005564;9.58e-12;10 | |||
|ontology_enrichment_disease=DOID:3095!3.72e-13!22;DOID:2994!3.72e-13!22;DOID:5409!2.99e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.45e-19!8;UBERON:0001905!2.53e-14!2;UBERON:0002757!2.53e-14!2;UBERON:0010134!2.53e-14!2;UBERON:0002784!2.53e-14!2;UBERON:0005408!2.53e-14!2;UBERON:0001899!2.53e-14!2;UBERON:0003135!3.47e-14!11;UBERON:0000970!4.10e-11!20;UBERON:0002104!1.47e-10!21;UBERON:0000991!3.12e-10!21;UBERON:0009196!3.12e-10!21;UBERON:0009117!3.12e-10!21;UBERON:0005564!3.12e-10!21;UBERON:0004176!9.63e-10!22;UBERON:0000020!1.37e-09!23;UBERON:0001032!3.63e-09!24;UBERON:0004456!3.63e-09!24;UBERON:0001778!4.54e-09!3;UBERON:0001775!4.54e-09!3;UBERON:0000019!2.99e-08!19;UBERON:0000047!2.99e-08!19;UBERON:0004088!2.99e-08!19;UBERON:0003072!2.99e-08!19;UBERON:0003071!2.99e-08!19;UBERON:0004128!2.99e-08!19;UBERON:0003296!1.39e-07!4;UBERON:0010133!1.39e-07!4;UBERON:0001456!1.93e-07!21;UBERON:0002336!3.17e-07!1;UBERON:0001018!3.17e-07!1;UBERON:0002473!3.17e-07!1;UBERON:0005340!3.17e-07!1;UBERON:0002316!3.17e-07!1;UBERON:0003544!3.17e-07!1;UBERON:0001020!3.17e-07!1;UBERON:0005970!3.17e-07!1;UBERON:0002437!3.17e-07!1;UBERON:0000488!5.22e-07!4;UBERON:0003101!5.56e-07!22;UBERON:0000079!5.56e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.45e-26;2!UBERON:0002757;2.45e-26;2!UBERON:0010134;2.45e-26;2!UBERON:0005408;2.45e-26;2!UBERON:0001899;2.45e-26;2!UBERON:0000473;1.57e-14;8!UBERON:0003296;1.11e-13;4!UBERON:0010133;1.11e-13;4!UBERON:0002784;1.11e-13;4!UBERON:0000966;3.72e-11;5!UBERON:0005388;3.72e-11;5!UBERON:0001802;3.72e-11;5!UBERON:0000922;5.57e-11;49!UBERON:0003135;9.93e-11;11!UBERON:0000970;1.93e-10;20!UBERON:0002104;5.92e-10;21!UBERON:0000020;4.17e-09;23!UBERON:0001032;9.81e-09;24!UBERON:0004456;9.81e-09;24!UBERON:0001894;3.33e-08;7!UBERON:0002360;1.64e-07;2!UBERON:0000094;1.64e-07;2!UBERON:0010743;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.45e-26,2;UBERON:0002757,2.45e-26,2;UBERON:0010134,2.45e-26,2;UBERON:0005408,2.45e-26,2;UBERON:0001899,2.45e-26,2;UBERON:0000473,1.77e-14,8;UBERON:0003296,1.11e-13,4;UBERON:0010133,1.11e-13,4;UBERON:0002784,1.11e-13,4;UBERON:0003135,1.08e-10,11;UBERON:0000970,5.93e-10,21;UBERON:0002104,5.93e-10,21;UBERON:0000966,1.91e-09,6;UBERON:0005388,1.91e-09,6;UBERON:0001802,1.91e-09,6;UBERON:0000020,9.81e-09,24;UBERON:0001032,9.81e-09,24;UBERON:0004456,9.81e-09,24;UBERON:0001894,3.33e-08,7;UBERON:0006222,3.33e-08,7;UBERON:0002360,1.64e-07,2;UBERON:0000094,1.64e-07,2;UBERON:0010743,1.64e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,1.70763188581434,1.45782745153634,1.2781333715647,1.45125477021519,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,11.4771100925326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,563.821948247429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,186.424238885644,510.814974050394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,301.702492969666,509.593897838043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,244.287828208344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.764859003745869,0.126698501011437,1.1218771271618,5.61156551057677,7.99485625953151,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,1.70763188581434,1.45782745153634,1.2781333715647,1.45125477021519,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,11.4771100925326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,563.821948247429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,186.424238885644,510.814974050394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,301.702492969666,509.593897838043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,244.287828208344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.764859003745869,0.126698501011437,1.1218771271618,5.61156551057677,7.99485625953151,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@AIPL1 | |||
}} | }} |
Latest revision as of 20:40, 16 September 2015
Short description: | p1@AIPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AIPL1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000444243_5end |
EntrezGene: | AIPL1 |
HGNC: | 359 |
UniProt: | F5H150 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.35e-60 | 5 |
germ line cell | 1.87e-16 | 7 |
germ cell | 1.87e-16 | 7 |
melanocyte | 1.46e-11 | 10 |
melanoblast | 1.46e-11 | 10 |
pigment cell | 2.04e-08 | 14 |
columnar/cuboidal epithelial cell | 1.60e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.45e-26 | 2 |
regional part of epithalamus | 2.45e-26 | 2 |
secretory circumventricular organ | 2.45e-26 | 2 |
circumventricular organ | 2.45e-26 | 2 |
epithalamus | 2.45e-26 | 2 |
testis | 1.77e-14 | 8 |
gland of diencephalon | 1.11e-13 | 4 |
neuroendocrine gland | 1.11e-13 | 4 |
regional part of diencephalon | 1.11e-13 | 4 |
male reproductive organ | 1.08e-10 | 11 |
eye | 5.93e-10 | 21 |
visual system | 5.93e-10 | 21 |
retina | 1.91e-09 | 6 |
photoreceptor array | 1.91e-09 | 6 |
posterior segment of eyeball | 1.91e-09 | 6 |
sense organ | 9.81e-09 | 24 |
sensory system | 9.81e-09 | 24 |
entire sense organ system | 9.81e-09 | 24 |
diencephalon | 3.33e-08 | 7 |
future diencephalon | 3.33e-08 | 7 |
meninx | 1.64e-07 | 2 |
membrane organ | 1.64e-07 | 2 |
meningeal cluster | 1.64e-07 | 2 |