FFCP PHASE1:Hg19::chr10:134217889..134217902,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170394 | |EntrezGene=170394 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=25150 | |HGNC=25150 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUJ5 | |UniProt=Q6NUJ5 | ||
|association_with_transcript=-236bp_to_AK128663_5end | |association_with_transcript=-236bp_to_AK128663_5end | ||
|cluster_id=chr10:134217889..134217902,+ | |||
|coexpression_cluster_id=C159 | |coexpression_cluster_id=C159 | ||
|description=CAGE_peak_12_at_PWWP2B_5end | |description=CAGE_peak_12_at_PWWP2B_5end | ||
|id=chr10:134217889..134217902,+ | |id=chr10:134217889..134217902,+ | ||
|ontology_enrichment_celltype=CL:0002541!2.45e-34!3;CL:0000349!1.42e-15!3;CL:0002577!1.42e-15!3;CL:0000039!3.28e-15!7;CL:0000586!3.28e-15!7;CL:0002537!1.26e-09!5 | |ontology_enrichment_celltype=CL:0002541!2.45e-34!3;CL:0000349!1.42e-15!3;CL:0002577!1.42e-15!3;CL:0000039!3.28e-15!7;CL:0000586!3.28e-15!7;CL:0002537!1.26e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.49e-38;3!CL:0000039;7.12e-37;7!CL:0000586;7.12e-37;7!CL:0000083;1.82e-08;4!CL:0000349;6.01e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.49e-38,3;CL:0000039,7.12e-37,7;CL:0000586,7.12e-37,7;CL:0000083,1.82e-08,4;CL:0000349,6.01e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.20e-29;1 | |||
|ontology_enrichment_disease=DOID:1799!7.89e-13!1;DOID:10165!7.89e-13!1;DOID:1798!7.89e-13!1;DOID:178!2.20e-12!1;DOID:326!2.20e-12!1;DOID:3978!2.20e-12!1;DOID:3394!2.20e-12!1;DOID:5844!2.20e-12!1;DOID:114!8.06e-07!2 | |ontology_enrichment_disease=DOID:1799!7.89e-13!1;DOID:10165!7.89e-13!1;DOID:1798!7.89e-13!1;DOID:178!2.20e-12!1;DOID:326!2.20e-12!1;DOID:3978!2.20e-12!1;DOID:3394!2.20e-12!1;DOID:5844!2.20e-12!1;DOID:114!8.06e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1799;9.99e-30;1!DOID:10165;9.99e-30;1!DOID:1798;9.99e-30;1!DOID:3095;2.64e-12;22!DOID:2994;2.64e-12;22!DOID:1793;1.82e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.99e-30,1;DOID:10165,9.99e-30,1;DOID:1798,9.99e-30,1;DOID:3095,2.64e-12,22;DOID:2994,2.64e-12,22;DOID:1793,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0003124!1.16e-56!7;UBERON:0005631!1.93e-49!14;UBERON:0000158!1.93e-49!14;UBERON:0000476!2.45e-34!3;UBERON:0000920!2.45e-34!3;UBERON:0000478!1.51e-28!24;UBERON:0001987!2.15e-25!4;UBERON:0004340!2.15e-25!4;UBERON:0004923!1.54e-11!57;UBERON:0000305!4.04e-07!7 | |ontology_enrichment_uberon=UBERON:0003124!1.16e-56!7;UBERON:0005631!1.93e-49!14;UBERON:0000158!1.93e-49!14;UBERON:0000476!2.45e-34!3;UBERON:0000920!2.45e-34!3;UBERON:0000478!1.51e-28!24;UBERON:0001987!2.15e-25!4;UBERON:0004340!2.15e-25!4;UBERON:0004923!1.54e-11!57;UBERON:0000305!4.04e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.49e-38;3!UBERON:0000920;1.49e-38;3!UBERON:0005631;2.37e-12;10!UBERON:0000158;2.37e-12;10!UBERON:0000478;2.61e-11;24!UBERON:0001987;2.61e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.49e-38,3;UBERON:0003124,9.10e-37,7;UBERON:0005631,7.78e-19,14;UBERON:0000158,7.78e-19,14;UBERON:0000478,2.61e-11,24;UBERON:0001987,2.61e-08,4;UBERON:0004340,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.447781594,3.14151755434202,2.39024218228418,5.10401855571071,0.457987967009312,8.52855641629816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0953347240711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86274977341542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.447781594,3.14151755434202,2.39024218228418,5.10401855571071,0.457987967009312,8.52855641629816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0953347240711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86274977341542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@PWWP2B | |short_description=p12@PWWP2B | ||
}} | }} |
Latest revision as of 03:59, 17 September 2015
Short description: | p12@PWWP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PWWP2B_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -236bp_to_AK128663_5end |
EntrezGene: | PWWP2B |
HGNC: | 25150 |
UniProt: | Q6NUJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.49e-38 | 3 |
germ line cell | 7.12e-37 | 7 |
germ cell | 7.12e-37 | 7 |
epithelial cell of pancreas | 1.82e-08 | 4 |
extraembryonic cell | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.49e-38 | 3 |
chorion | 9.10e-37 | 7 |
extraembryonic membrane | 7.78e-19 | 14 |
membranous layer | 7.78e-19 | 14 |
extraembryonic structure | 2.61e-11 | 24 |
placenta | 2.61e-08 | 4 |
allantois | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.99e-30 | 1 |
endocrine pancreas cancer | 9.99e-30 | 1 |
pancreatic endocrine carcinoma | 9.99e-30 | 1 |
germ cell and embryonal cancer | 2.64e-12 | 22 |
germ cell cancer | 2.64e-12 | 22 |
pancreatic cancer | 1.82e-08 | 4 |