FFCP PHASE1:Hg19::chr11:116694123..116694131,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=337 | |EntrezGene=337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=602 | |HGNC=602 | ||
|TSSclassifier=strong | |||
|UniProt=P06727 | |UniProt=P06727 | ||
|association_with_transcript=-101bp_to_ENST00000357780_5end | |association_with_transcript=-101bp_to_ENST00000357780_5end | ||
|cluster_id=chr11:116694123..116694131,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_8_at_APOA4_5end | |description=CAGE_peak_8_at_APOA4_5end | ||
|id=chr11:116694123..116694131,- | |id=chr11:116694123..116694131,- | ||
|ontology_enrichment_celltype=CL:0002563!1.92e-07!4 | |ontology_enrichment_celltype=CL:0002563!1.92e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.20e-32!27;UBERON:0005409!6.62e-25!35;UBERON:0002108!1.18e-15!14;UBERON:0001155!4.42e-12!9;UBERON:0000059!4.62e-10!11;UBERON:0004921!2.27e-09!129;UBERON:0004185!2.27e-09!129;UBERON:0001007!8.55e-08!155;UBERON:0001555!8.55e-08!155;UBERON:0007026!8.55e-08!155;UBERON:0001242!1.92e-07!4;UBERON:0001262!1.92e-07!4;UBERON:0004786!1.92e-07!4;UBERON:0004808!1.92e-07!4;UBERON:0001277!1.92e-07!4;UBERON:0004119!3.84e-07!169;UBERON:0000925!3.84e-07!169;UBERON:0006595!3.84e-07!169 | |ontology_enrichment_uberon=UBERON:0000160!6.20e-32!27;UBERON:0005409!6.62e-25!35;UBERON:0002108!1.18e-15!14;UBERON:0001155!4.42e-12!9;UBERON:0000059!4.62e-10!11;UBERON:0004921!2.27e-09!129;UBERON:0004185!2.27e-09!129;UBERON:0001007!8.55e-08!155;UBERON:0001555!8.55e-08!155;UBERON:0007026!8.55e-08!155;UBERON:0001242!1.92e-07!4;UBERON:0001262!1.92e-07!4;UBERON:0004786!1.92e-07!4;UBERON:0004808!1.92e-07!4;UBERON:0001277!1.92e-07!4;UBERON:0004119!3.84e-07!169;UBERON:0000925!3.84e-07!169;UBERON:0006595!3.84e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.88e-23;17!UBERON:0002108;4.21e-21;4!UBERON:0005409;2.02e-18;22!UBERON:0004921;1.77e-12;33!UBERON:0001155;2.45e-12;9!UBERON:0000059;2.37e-10;11!UBERON:0001135;5.55e-08;15!UBERON:0001555;1.47e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.88e-23,17;UBERON:0002108,4.21e-21,4;UBERON:0005409,1.86e-16,25;UBERON:0001155,2.45e-12,9;UBERON:0000059,2.37e-10,11;UBERON:0001135,5.55e-08,15 | |||
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|short_description=p8@APOA4 | |short_description=p8@APOA4 | ||
}} | }} |
Latest revision as of 19:25, 15 September 2015
Short description: | p8@APOA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_APOA4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -101bp_to_ENST00000357780_5end |
EntrezGene: | APOA4 |
HGNC: | 602 |
UniProt: | P06727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.88e-23 | 17 |
small intestine | 4.21e-21 | 4 |
gastrointestinal system | 1.86e-16 | 25 |
colon | 2.45e-12 | 9 |
large intestine | 2.37e-10 | 11 |
smooth muscle tissue | 5.55e-08 | 15 |