FFCP PHASE1:Hg19::chr11:28858441..28858464,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:28858441..28858464,+ | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr11:28858441..28858464,+ | |description=CAGE_peak_at_chr11:28858441..28858464,+ | ||
|id=chr11:28858441..28858464,+ | |id=chr11:28858441..28858464,+ | ||
|ontology_enrichment_celltype=CL:0002589!1.68e-14!2;CL:0000064!1.22e-09!3;CL:0005012!1.22e-09!3;CL:0000067!1.22e-09!3;CL:0002304!1.22e-09!3;CL:0000864!2.71e-08!1;CL:0000091!2.71e-08!1;CL:0000342!6.19e-08!1;CL:0002565!6.19e-08!1;CL:0000359!2.94e-07!32 | |ontology_enrichment_celltype=CL:0002589!1.68e-14!2;CL:0000064!1.22e-09!3;CL:0005012!1.22e-09!3;CL:0000067!1.22e-09!3;CL:0002304!1.22e-09!3;CL:0000864!2.71e-08!1;CL:0000091!2.71e-08!1;CL:0000342!6.19e-08!1;CL:0002565!6.19e-08!1;CL:0000359!2.94e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:1000306;7.35e-18;4!CL:0002547;7.35e-18;4!CL:0002548;2.74e-12;6!CL:0002539;6.13e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,7.35e-18,4;CL:0002547,7.35e-18,4;CL:0002548,2.74e-12,6;CL:0002539,6.13e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3571!2.71e-08!1 | |ontology_enrichment_disease=DOID:3571!2.71e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!2.64e-15!4;UBERON:0007625!6.63e-15!11;UBERON:0001529!1.68e-14!2;UBERON:0007204!1.68e-14!2;UBERON:0002203!2.20e-10!6;UBERON:0001768!2.20e-10!6;UBERON:0000020!7.96e-10!23;UBERON:0001778!1.22e-09!3;UBERON:0001775!1.22e-09!3;UBERON:0001032!2.15e-09!24;UBERON:0004456!2.15e-09!24;UBERON:0000019!1.50e-08!19;UBERON:0000047!1.50e-08!19;UBERON:0004088!1.50e-08!19;UBERON:0003072!1.50e-08!19;UBERON:0003071!1.50e-08!19;UBERON:0004128!1.50e-08!19;UBERON:0002049!1.89e-08!79;UBERON:0007798!1.89e-08!79;UBERON:0000970!4.11e-08!20;UBERON:0004535!5.84e-08!110;UBERON:0002506!6.19e-08!1;UBERON:0001769!6.19e-08!1;UBERON:0002104!1.02e-07!21;UBERON:0001456!1.02e-07!21;UBERON:0001801!1.05e-07!14;UBERON:0001009!1.10e-07!113;UBERON:0004573!4.59e-07!33;UBERON:0004571!4.59e-07!33 | |ontology_enrichment_uberon=UBERON:0000488!2.64e-15!4;UBERON:0007625!6.63e-15!11;UBERON:0001529!1.68e-14!2;UBERON:0007204!1.68e-14!2;UBERON:0002203!2.20e-10!6;UBERON:0001768!2.20e-10!6;UBERON:0000020!7.96e-10!23;UBERON:0001778!1.22e-09!3;UBERON:0001775!1.22e-09!3;UBERON:0001032!2.15e-09!24;UBERON:0004456!2.15e-09!24;UBERON:0000019!1.50e-08!19;UBERON:0000047!1.50e-08!19;UBERON:0004088!1.50e-08!19;UBERON:0003072!1.50e-08!19;UBERON:0003071!1.50e-08!19;UBERON:0004128!1.50e-08!19;UBERON:0002049!1.89e-08!79;UBERON:0007798!1.89e-08!79;UBERON:0000970!4.11e-08!20;UBERON:0004535!5.84e-08!110;UBERON:0002506!6.19e-08!1;UBERON:0001769!6.19e-08!1;UBERON:0002104!1.02e-07!21;UBERON:0001456!1.02e-07!21;UBERON:0001801!1.05e-07!14;UBERON:0001009!1.10e-07!113;UBERON:0004573!4.59e-07!33;UBERON:0004571!4.59e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;7.35e-18;4!UBERON:0000415;7.35e-18;4!UBERON:0007240;7.35e-18;4!UBERON:0005742;7.35e-18;4!UBERON:0005734;7.35e-18;4!UBERON:0004664;7.35e-18;4!UBERON:0004663;7.35e-18;4!UBERON:0000947;1.02e-13;21!UBERON:0010191;1.02e-13;21!UBERON:0004573;2.68e-09;33!UBERON:0004571;2.68e-09;33!UBERON:0004237;6.13e-08;10!UBERON:0004695;6.13e-08;10!UBERON:0002111;6.13e-08;10!UBERON:0004178;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.35e-18,4;UBERON:0007240,7.35e-18,4;UBERON:0005742,7.35e-18,4;UBERON:0005734,7.35e-18,4;UBERON:0004664,7.35e-18,4;UBERON:0004663,7.35e-18,4;UBERON:0000947,1.02e-13,21;UBERON:0010191,1.02e-13,21;UBERON:0004797,8.16e-11,7;UBERON:0004573,3.79e-09,33;UBERON:0004571,3.79e-09,33;UBERON:0004872,3.31e-08,83;UBERON:0004237,6.13e-08,10;UBERON:0004695,6.13e-08,10;UBERON:0002111,6.13e-08,10;UBERON:0004178,6.13e-08,10;UBERON:0001637,2.04e-07,42;UBERON:0003509,2.04e-07,42;UBERON:0004572,2.04e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36950296683622,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,2.83331112147576,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0.690860683462397,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36950296683622,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,2.83331112147576,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0.690860683462397,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:28858441..28858464,+ | |short_description=p@chr11:28858441..28858464,+ | ||
}} | }} |
Latest revision as of 21:21, 23 July 2015
Short description: | p@chr11:28858441..28858464, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:28858441..28858464, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 7.35e-18 | 4 |
fibroblast of the aortic adventitia | 7.35e-18 | 4 |
cardiac fibroblast | 2.74e-12 | 6 |
aortic smooth muscle cell | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.35e-18 | 4 |
tunica adventitia of artery | 7.35e-18 | 4 |
adventitia | 7.35e-18 | 4 |
tunica adventitia of blood vessel | 7.35e-18 | 4 |
aorta tunica adventitia | 7.35e-18 | 4 |
aorta wall | 7.35e-18 | 4 |
aorta | 1.02e-13 | 21 |
aortic system | 1.02e-13 | 21 |
blood vessel layer | 8.16e-11 | 7 |
systemic artery | 3.79e-09 | 33 |
systemic arterial system | 3.79e-09 | 33 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |
blood vessel smooth muscle | 6.13e-08 | 10 |
arterial system smooth muscle | 6.13e-08 | 10 |
artery smooth muscle tissue | 6.13e-08 | 10 |
aorta smooth muscle tissue | 6.13e-08 | 10 |
artery | 2.04e-07 | 42 |
arterial blood vessel | 2.04e-07 | 42 |
arterial system | 2.04e-07 | 42 |