FFCP PHASE1:Hg19::chr11:62380709..62380748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6094 | |EntrezGene=6094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10254 | |HGNC=10254 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMR7 | |UniProt=E9PMR7 | ||
|association_with_transcript=-252bp_to_ENST00000525947_5end | |association_with_transcript=-252bp_to_ENST00000525947_5end | ||
|cluster_id=chr11:62380709..62380748,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_2_at_ROM1_5end | |description=CAGE_peak_2_at_ROM1_5end | ||
|id=chr11:62380709..62380748,+ | |id=chr11:62380709..62380748,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.80e-11!24;CL:0000115!2.56e-10!35;CL:0000071!6.31e-10!18;CL:0002546!6.31e-10!18;CL:0002078!3.24e-08!44;CL:1000413!3.39e-07!9 | |ontology_enrichment_celltype=CL:0002139!4.80e-11!24;CL:0000115!2.56e-10!35;CL:0000071!6.31e-10!18;CL:0002546!6.31e-10!18;CL:0002078!3.24e-08!44;CL:1000413!3.39e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000138;3.20e-14;6!CL:0002561;4.18e-12;2!CL:0002602;6.13e-12;2!CL:0000153;1.59e-09;9!CL:0000447;1.59e-09;9!CL:0002564;4.09e-08;3!CL:0000135;8.87e-08;3!CL:0000388;8.87e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.79e-14,6;CL:0000138,2.79e-14,6;CL:0002561,4.43e-12,2;CL:0002602,6.15e-12,2;CL:0000153,1.46e-09,9;CL:0000447,1.46e-09,9;CL:0002564,3.55e-08,3;CL:0000135,5.64e-08,3;CL:0000388,5.64e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.42e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0011135;1.40e-17;5!UBERON:0002216;1.40e-17;5!UBERON:0011134;1.40e-17;5!UBERON:0002209;1.40e-17;5!UBERON:0002213;1.40e-17;5!UBERON:0007844;1.40e-17;5!UBERON:0011138;1.40e-17;5!UBERON:0001130;1.40e-17;5!UBERON:0001066;1.40e-17;5!UBERON:0001468;1.40e-17;5!UBERON:0002784;2.82e-13;4!UBERON:0001905;1.93e-12;2!UBERON:0002757;1.93e-12;2!UBERON:0010134;1.93e-12;2!UBERON:0005408;1.93e-12;2!UBERON:0001899;1.93e-12;2!UBERON:0005933;4.18e-12;2!UBERON:0005942;4.18e-12;2!UBERON:0005932;4.18e-12;2!UBERON:0006444;6.13e-12;2!UBERON:0001995;6.13e-12;2!UBERON:0004715;6.13e-12;2!UBERON:0004905;4.88e-11;8!UBERON:0000982;4.88e-11;8!UBERON:0004770;4.88e-11;8!UBERON:0000966;2.23e-10;5!UBERON:0005388;2.23e-10;5!UBERON:0001802;2.23e-10;5!UBERON:0000970;2.39e-09;20!UBERON:0002104;7.13e-09;21!UBERON:0002418;3.07e-08;3!UBERON:0004755;3.07e-08;3!UBERON:0002242;4.09e-08;3!UBERON:0000020;4.77e-08;23!UBERON:0007846;8.87e-08;3!UBERON:0000043;8.87e-08;3!UBERON:0007845;8.87e-08;3!UBERON:0001894;9.03e-08;7!UBERON:0001032;1.10e-07;24!UBERON:0004456;1.10e-07;24!UBERON:0000019;5.90e-07;19!UBERON:0000047;5.90e-07;19!UBERON:0004088;5.90e-07;19!UBERON:0010230;5.90e-07;19!UBERON:0004765;8.16e-07;26 | |||
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|short_description=p2@ROM1 | |short_description=p2@ROM1 | ||
}} | }} |
Latest revision as of 20:16, 18 September 2015
Short description: | p2@ROM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ROM1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -252bp_to_ENST00000525947_5end |
EntrezGene: | ROM1 |
HGNC: | 10254 |
UniProt: | E9PMR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.79e-14 | 6 |
chondrocyte | 2.79e-14 | 6 |
outer root sheath cell | 4.43e-12 | 2 |
annulus pulposus cell | 6.15e-12 | 2 |
GAG secreting cell | 1.46e-09 | 9 |
carbohydrate secreting cell | 1.46e-09 | 9 |
nucleus pulposus cell of intervertebral disc | 3.55e-08 | 3 |
fibrocyte | 5.64e-08 | 3 |
tendon cell | 5.64e-08 | 3 |