FFCP PHASE1:Hg19::chr12:10205256..10205285,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB590792_5end | |association_with_transcript=0bp_to_AB590792_5end | ||
|cluster_id=chr12:10205256..10205285,+ | |||
|coexpression_cluster_id=C156 | |coexpression_cluster_id=C156 | ||
|description=CAGE_peak_2_at_AB590792_5end | |description=CAGE_peak_2_at_AB590792_5end | ||
|id=chr12:10205256..10205285,+ | |id=chr12:10205256..10205285,+ | ||
|ontology_enrichment_celltype=CL:0000094!1.30e-15!8;CL:0000081!7.42e-11!11;CL:0000775!3.05e-07!3 | |ontology_enrichment_celltype=CL:0000094!1.30e-15!8;CL:0000081!7.42e-11!11;CL:0000775!3.05e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.08e-25;8!CL:0000081;1.51e-18;11!CL:0000775;3.87e-18;3!CL:0000771;5.45e-13;2!CL:0000946;1.45e-07;1!CL:0000786;1.45e-07;1!CL:0000037;2.37e-07;1!CL:0001024;2.37e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,8.38e-26,8;CL:0000081,1.25e-18,11;CL:0000775,2.98e-18,3;CL:0000771,4.98e-13,2;CL:0000946,1.46e-07,1;CL:0000786,1.46e-07,1;CL:0000980,1.46e-07,1;CL:0001024,2.67e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;8.67e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.44e-47!115;UBERON:0000178!1.24e-14!15;UBERON:0000179!1.24e-14!15;UBERON:0000463!1.24e-14!15;UBERON:0001049!1.71e-13!57;UBERON:0005068!1.71e-13!57;UBERON:0006241!1.71e-13!57;UBERON:0007135!1.71e-13!57;UBERON:0002616!1.36e-11!59;UBERON:0001893!2.01e-11!34;UBERON:0002780!2.40e-11!41;UBERON:0001890!2.40e-11!41;UBERON:0006240!2.40e-11!41;UBERON:0003080!5.83e-11!42;UBERON:0002791!1.44e-10!33;UBERON:0002020!3.55e-10!34;UBERON:0003528!3.55e-10!34;UBERON:0003075!7.33e-10!86;UBERON:0007284!7.33e-10!86;UBERON:0000955!1.10e-09!69;UBERON:0006238!1.10e-09!69;UBERON:0005743!1.23e-09!86;UBERON:0001017!1.38e-09!82;UBERON:0001869!2.85e-09!32;UBERON:0002346!4.24e-09!90;UBERON:0002298!3.52e-08!8;UBERON:0000073!4.63e-08!94;UBERON:0001016!4.63e-08!94;UBERON:0002619!5.46e-08!22;UBERON:0001950!1.93e-07!20;UBERON:0004177!3.60e-07!7;UBERON:0003056!6.69e-07!61;UBERON:0000956!9.01e-07!25;UBERON:0000203!9.01e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!2.44e-47!115;UBERON:0000178!1.24e-14!15;UBERON:0000179!1.24e-14!15;UBERON:0000463!1.24e-14!15;UBERON:0001049!1.71e-13!57;UBERON:0005068!1.71e-13!57;UBERON:0006241!1.71e-13!57;UBERON:0007135!1.71e-13!57;UBERON:0002616!1.36e-11!59;UBERON:0001893!2.01e-11!34;UBERON:0002780!2.40e-11!41;UBERON:0001890!2.40e-11!41;UBERON:0006240!2.40e-11!41;UBERON:0003080!5.83e-11!42;UBERON:0002791!1.44e-10!33;UBERON:0002020!3.55e-10!34;UBERON:0003528!3.55e-10!34;UBERON:0003075!7.33e-10!86;UBERON:0007284!7.33e-10!86;UBERON:0000955!1.10e-09!69;UBERON:0006238!1.10e-09!69;UBERON:0005743!1.23e-09!86;UBERON:0001017!1.38e-09!82;UBERON:0001869!2.85e-09!32;UBERON:0002346!4.24e-09!90;UBERON:0002298!3.52e-08!8;UBERON:0000073!4.63e-08!94;UBERON:0001016!4.63e-08!94;UBERON:0002619!5.46e-08!22;UBERON:0001950!1.93e-07!20;UBERON:0004177!3.60e-07!7;UBERON:0003056!6.69e-07!61;UBERON:0000956!9.01e-07!25;UBERON:0000203!9.01e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.96e-30;15!UBERON:0000179;5.96e-30;15!UBERON:0000463;5.96e-30;15!UBERON:0002390;9.02e-25;32!UBERON:0002193;8.54e-15;42!UBERON:0002370;4.98e-13;2!UBERON:0005058;4.98e-13;2!UBERON:0009113;4.98e-13;2!UBERON:0004177;4.51e-11;5!UBERON:0005057;4.51e-11;5!UBERON:0000029;5.14e-07;1!UBERON:0002426;5.14e-07;1!UBERON:0003831;5.14e-07;1!UBERON:0003898;5.14e-07;1!UBERON:0004830;5.14e-07;1!UBERON:0003830;5.14e-07;1!UBERON:0005175;5.14e-07;1!UBERON:0001774;5.14e-07;1!UBERON:0001103;5.14e-07;1!UBERON:0002038;8.67e-07;1!UBERON:0001154;8.67e-07;1!UBERON:0001153;8.67e-07;1!UBERON:0002171;8.67e-07;1!UBERON:0009854;8.67e-07;1!UBERON:0009661;8.67e-07;1!UBERON:0006518;8.67e-07;1!UBERON:0008949;8.67e-07;1!UBERON:0002950;8.67e-07;1!UBERON:0000101;8.67e-07;1!UBERON:0001891;8.67e-07;1!UBERON:0002167;8.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.48e-30,15;UBERON:0000179,5.48e-30,15;UBERON:0000463,5.48e-30,15;UBERON:0007023,7.94e-11,114;UBERON:0004177,4.43e-08,7;UBERON:0005057,4.43e-08,7;UBERON:0002193,1.35e-07,108;UBERON:0002390,2.42e-07,98;UBERON:0003061,2.42e-07,98;UBERON:0000029,4.31e-07,1;UBERON:0002426,5.45e-07,1;UBERON:0003831,5.45e-07,1;UBERON:0003898,5.45e-07,1;UBERON:0004830,5.45e-07,1;UBERON:0003830,5.45e-07,1;UBERON:0005175,5.45e-07,1;UBERON:0001774,5.45e-07,1;UBERON:0001103,5.45e-07,1;UBERON:0010084,5.45e-07,1;UBERON:0002370,6.14e-07,4;UBERON:0005058,6.14e-07,4;UBERON:0009113,6.14e-07,4;UBERON:0003295,6.14e-07,4;UBERON:0005562,6.14e-07,4;UBERON:0002171,8.18e-07,1;UBERON:0006518,8.18e-07,1;UBERON:0008949,8.18e-07,1;UBERON:0000101,8.18e-07,1;UBERON:0002167,8.18e-07,1;UBERON:0001154,9.73e-07,1;UBERON:0001153,9.73e-07,1;UBERON:0001045,9.73e-07,1 | |||
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| ||
|short_description=p2@AB590792 | |short_description=p2@AB590792 | ||
}} | }} |
Latest revision as of 04:01, 24 July 2015
Short description: | p2@AB590792 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AB590792_5end |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | 0bp_to_AB590792_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 8.38e-26 | 8 |
blood cell | 1.25e-18 | 11 |
neutrophil | 2.98e-18 | 3 |
eosinophil | 4.98e-13 | 2 |
antibody secreting cell | 1.46e-07 | 1 |
plasma cell | 1.46e-07 | 1 |
plasmablast | 1.46e-07 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 5.48e-30 | 15 |
haemolymphatic fluid | 5.48e-30 | 15 |
organism substance | 5.48e-30 | 15 |
adult organism | 7.94e-11 | 114 |
hemopoietic organ | 4.43e-08 | 7 |
immune organ | 4.43e-08 | 7 |
hemolymphoid system | 1.35e-07 | 108 |
hematopoietic system | 2.42e-07 | 98 |
blood island | 2.42e-07 | 98 |
lymph node | 4.31e-07 | 1 |
chest muscle | 5.45e-07 | 1 |
respiratory system muscle | 5.45e-07 | 1 |
skeletal muscle of trunk | 5.45e-07 | 1 |
respiratory system skeletal muscle | 5.45e-07 | 1 |
thoracic segment muscle | 5.45e-07 | 1 |
chest organ | 5.45e-07 | 1 |
muscle of trunk | 5.45e-07 | 1 |
diaphragm | 5.45e-07 | 1 |
future diaphragm | 5.45e-07 | 1 |
thymus | 6.14e-07 | 4 |
hemolymphoid system gland | 6.14e-07 | 4 |
thymic region | 6.14e-07 | 4 |
pharyngeal gland | 6.14e-07 | 4 |
thymus primordium | 6.14e-07 | 4 |
lower lobe of right lung | 8.18e-07 | 1 |
right lung lobe | 8.18e-07 | 1 |
lower lobe of lung | 8.18e-07 | 1 |
lobe of lung | 8.18e-07 | 1 |
right lung | 8.18e-07 | 1 |
vermiform appendix | 9.73e-07 | 1 |
caecum | 9.73e-07 | 1 |
midgut | 9.73e-07 | 1 |