FFCP PHASE1:Hg19::chr12:11708881..11708905,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=247bp_to_ENST00000545239_5end | |association_with_transcript=247bp_to_ENST00000545239_5end | ||
|cluster_id=chr12:11708881..11708905,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_1_at_ENST00000545239_5end | |description=CAGE_peak_1_at_ENST00000545239_5end | ||
|id=chr12:11708881..11708905,+ | |id=chr12:11708881..11708905,+ | ||
|ontology_enrichment_celltype=CL:0000946!2.22e-09!1;CL:0000786!2.22e-09!1;CL:0000980!2.22e-09!1;CL:0000838!1.25e-08!52;CL:0000542!1.91e-08!53;CL:0000051!1.91e-08!53;CL:0000945!3.40e-08!24;CL:0000826!3.40e-08!24 | |ontology_enrichment_celltype=CL:0000946!2.22e-09!1;CL:0000786!2.22e-09!1;CL:0000980!2.22e-09!1;CL:0000838!1.25e-08!52;CL:0000542!1.91e-08!53;CL:0000051!1.91e-08!53;CL:0000945!3.40e-08!24;CL:0000826!3.40e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.16e-29;1!CL:0000786;3.16e-29;1!CL:0000945;2.33e-19;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.37e-29,1;CL:0000786,2.37e-29,1;CL:0000980,2.37e-29,1;CL:0000945,2.22e-19,24;CL:0000826,2.22e-19,24;CL:0000785,2.05e-15,2;CL:0000955,2.05e-15,2;CL:0000818,2.05e-15,2;CL:0000954,2.05e-15,2;CL:0000816,2.05e-15,2;CL:0000817,9.90e-11,3;CL:0000838,3.16e-09,52;CL:0000542,4.63e-09,53;CL:0000051,4.63e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000954;2.37e-15;2!UBERON:0007297;2.37e-15;2 | |||
|ontology_enrichment_disease=DOID:0060058!8.95e-13!10;DOID:2355!3.05e-09!1;DOID:0060060!5.31e-09!1;DOID:0060061!5.31e-09!1;DOID:8691!5.31e-09!1 | |ontology_enrichment_disease=DOID:0060058!8.95e-13!10;DOID:2355!3.05e-09!1;DOID:0060060!5.31e-09!1;DOID:0060061!5.31e-09!1;DOID:8691!5.31e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002771!3.79e-11!3;UBERON:0001301!2.40e-09!1;UBERON:0002146!4.19e-09!1;UBERON:0005623!4.19e-09!1;UBERON:0001871!4.21e-09!7;UBERON:0001874!6.72e-09!1 | |ontology_enrichment_uberon=UBERON:0002771!3.79e-11!3;UBERON:0001301!2.40e-09!1;UBERON:0002146!4.19e-09!1;UBERON:0005623!4.19e-09!1;UBERON:0001871!4.21e-09!7;UBERON:0001874!6.72e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.16e-29;1!UBERON:0002106;6.73e-11;3!UBERON:0006947;1.09e-10;3!UBERON:0004054;1.09e-10;3!UBERON:0005904;2.43e-08;4!UBERON:0004177;4.79e-07;5!UBERON:0005057;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.16e-29,1;UBERON:0002106,6.73e-11,3;UBERON:0004854,6.73e-11,3;UBERON:0009034,6.73e-11,3;UBERON:0002095,6.73e-11,3;UBERON:0004782,6.73e-11,3;UBERON:0003281,6.73e-11,3;UBERON:0009664,6.73e-11,3;UBERON:0002296,6.73e-11,3;UBERON:0005602,6.73e-11,3;UBERON:0001179,6.73e-11,3;UBERON:0006293,6.73e-11,3;UBERON:0006947,1.09e-10,3;UBERON:0004054,1.09e-10,3;UBERON:0003887,1.85e-10,12;UBERON:0005904,2.43e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,2.29881650459848,2.91229890860613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19752854884702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,2.29881650459848,2.91229890860613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19752854884702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000545239 | |short_description=p1@ENST00000545239 | ||
}} | }} |
Latest revision as of 05:25, 24 July 2015
Short description: | p1@ENST00000545239 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000545239_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 247bp_to_ENST00000545239_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.37e-29 | 1 |
plasma cell | 2.37e-29 | 1 |
plasmablast | 2.37e-29 | 1 |
lymphocyte of B lineage | 2.22e-19 | 24 |
pro-B cell | 2.22e-19 | 24 |
mature B cell | 2.05e-15 | 2 |
pre-B-II cell | 2.05e-15 | 2 |
transitional stage B cell | 2.05e-15 | 2 |
small pre-B-II cell | 2.05e-15 | 2 |
immature B cell | 2.05e-15 | 2 |
precursor B cell | 9.90e-11 | 3 |
lymphoid lineage restricted progenitor cell | 3.16e-09 | 52 |
lymphocyte | 4.63e-09 | 53 |
common lymphoid progenitor | 4.63e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.16e-29 | 1 |
spleen | 6.73e-11 | 3 |
gastrointestinal system mesentery | 6.73e-11 | 3 |
stomach region | 6.73e-11 | 3 |
mesentery | 6.73e-11 | 3 |
gastrointestinal system serosa | 6.73e-11 | 3 |
mesentery of stomach | 6.73e-11 | 3 |
gut mesentery | 6.73e-11 | 3 |
dorsal mesentery | 6.73e-11 | 3 |
dorsal mesogastrium | 6.73e-11 | 3 |
peritoneal cavity | 6.73e-11 | 3 |
spleen primordium | 6.73e-11 | 3 |
male genital duct | 1.09e-10 | 3 |
internal male genitalia | 1.09e-10 | 3 |
intraembryonic coelom | 1.85e-10 | 12 |
duct of male reproductive system | 2.43e-08 | 4 |