FFCP PHASE1:Hg19::chr12:25150496..25150515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:25150496..25150515,+ | |||
|coexpression_cluster_id=C96 | |coexpression_cluster_id=C96 | ||
|description=CAGE_peak_at_chr12:25150496..25150515,+ | |description=CAGE_peak_at_chr12:25150496..25150515,+ | ||
|id=chr12:25150496..25150515,+ | |id=chr12:25150496..25150515,+ | ||
|ontology_enrichment_celltype=CL:0000945!5.23e-27!24;CL:0000826!5.23e-27!24;CL:0000542!4.80e-12!53;CL:0000051!4.80e-12!53;CL:0000236!8.79e-12!14;CL:0000817!1.09e-11!3;CL:0000838!1.37e-10!52;CL:0000785!1.77e-08!2;CL:0000955!1.77e-08!2;CL:0000818!1.77e-08!2;CL:0000954!1.77e-08!2;CL:0000816!1.77e-08!2 | |ontology_enrichment_celltype=CL:0000945!5.23e-27!24;CL:0000826!5.23e-27!24;CL:0000542!4.80e-12!53;CL:0000051!4.80e-12!53;CL:0000236!8.79e-12!14;CL:0000817!1.09e-11!3;CL:0000838!1.37e-10!52;CL:0000785!1.77e-08!2;CL:0000955!1.77e-08!2;CL:0000818!1.77e-08!2;CL:0000954!1.77e-08!2;CL:0000816!1.77e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.56e-55;24!CL:0000946;9.49e-18;1!CL:0000786;9.49e-18;1!CL:0000785;1.44e-17;1!CL:0000819;1.44e-17;1!CL:0000542;2.46e-15;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.11e-55,24;CL:0000826,9.11e-55,24;CL:0000785,1.93e-33,2;CL:0000955,1.93e-33,2;CL:0000818,1.93e-33,2;CL:0000954,1.93e-33,2;CL:0000816,1.93e-33,2;CL:0000542,2.54e-30,53;CL:0000051,2.54e-30,53;CL:0000838,5.04e-25,52;CL:0000817,1.12e-22,3;CL:0000946,8.72e-18,1;CL:0000786,8.72e-18,1;CL:0000980,8.72e-18,1;CL:0000819,1.70e-17,1;CL:0002087,1.82e-13,115;CL:0000738,2.82e-11,136;CL:0002031,2.24e-10,120;CL:0002032,2.12e-09,161;CL:0000837,2.12e-09,161;CL:0000037,5.65e-09,168;CL:0000988,1.79e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000954;1.78e-33;2!CL:0000051;2.46e-15;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.21e-09!10 | |ontology_enrichment_disease=DOID:0060058!3.21e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.24e-41;10!DOID:12603;7.37e-18;1!DOID:4960;1.44e-17;1!DOID:0060073;1.44e-17;1!DOID:0070004;1.44e-17;1!DOID:8675;1.44e-17;1!DOID:2531;4.22e-09;51!DOID:0060083;4.22e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.24e-41,10;DOID:12603,7.37e-18,1;DOID:4960,1.44e-17,1;DOID:0070004,1.44e-17,1;DOID:0060073,1.70e-17,1;DOID:8675,1.70e-17,1;DOID:2531,1.94e-15,51;DOID:0060083,1.94e-15,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-16!115;UBERON:0000200!1.33e-08!6;UBERON:0004177!9.05e-08!7;UBERON:0001893!2.27e-07!34;UBERON:0002780!3.45e-07!41;UBERON:0001890!3.45e-07!41;UBERON:0006240!3.45e-07!41;UBERON:0003080!5.67e-07!42;UBERON:0000955!7.84e-07!69;UBERON:0006238!7.84e-07!69;UBERON:0000153!8.68e-07!129;UBERON:0007811!8.68e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!1.42e-16!115;UBERON:0000200!1.33e-08!6;UBERON:0004177!9.05e-08!7;UBERON:0001893!2.27e-07!34;UBERON:0002780!3.45e-07!41;UBERON:0001890!3.45e-07!41;UBERON:0006240!3.45e-07!41;UBERON:0003080!5.67e-07!42;UBERON:0000955!7.84e-07!69;UBERON:0006238!7.84e-07!69;UBERON:0000153!8.68e-07!129;UBERON:0007811!8.68e-07!129 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.64e-07,3;UBERON:0004854,9.64e-07,3;UBERON:0009034,9.64e-07,3;UBERON:0002095,9.64e-07,3;UBERON:0004782,9.64e-07,3;UBERON:0003281,9.64e-07,3;UBERON:0009664,9.64e-07,3;UBERON:0002296,9.64e-07,3;UBERON:0005602,9.64e-07,3;UBERON:0001179,9.64e-07,3;UBERON:0006293,9.64e-07,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80079311156766,6.40384597709577,7.39881344348585,0,0,0,0,0,0,8.21152326151197,7.67713855432076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20248890352012,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,1.094728735294,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,2.07047417247523,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,31.1503892754951,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0,2.18944576355981,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,1.89888196257365,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0,0.435433495793923,0,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:25150496..25150515,+ | |short_description=p@chr12:25150496..25150515,+ | ||
}} | }} |
Latest revision as of 07:44, 24 July 2015
Short description: | p@chr12:25150496..25150515, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:25150496..25150515, + |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.11e-55 | 24 |
pro-B cell | 9.11e-55 | 24 |
mature B cell | 1.93e-33 | 2 |
pre-B-II cell | 1.93e-33 | 2 |
transitional stage B cell | 1.93e-33 | 2 |
small pre-B-II cell | 1.93e-33 | 2 |
immature B cell | 1.93e-33 | 2 |
lymphocyte | 2.54e-30 | 53 |
common lymphoid progenitor | 2.54e-30 | 53 |
lymphoid lineage restricted progenitor cell | 5.04e-25 | 52 |
precursor B cell | 1.12e-22 | 3 |
antibody secreting cell | 8.72e-18 | 1 |
plasma cell | 8.72e-18 | 1 |
plasmablast | 8.72e-18 | 1 |
B-1 B cell | 1.70e-17 | 1 |
nongranular leukocyte | 1.82e-13 | 115 |
leukocyte | 2.82e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 2.24e-10 | 120 |
hematopoietic oligopotent progenitor cell | 2.12e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-09 | 161 |
hematopoietic stem cell | 5.65e-09 | 168 |
hematopoietic cell | 1.79e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.64e-07 | 3 |
gastrointestinal system mesentery | 9.64e-07 | 3 |
stomach region | 9.64e-07 | 3 |
mesentery | 9.64e-07 | 3 |
gastrointestinal system serosa | 9.64e-07 | 3 |
mesentery of stomach | 9.64e-07 | 3 |
gut mesentery | 9.64e-07 | 3 |
dorsal mesentery | 9.64e-07 | 3 |
dorsal mesogastrium | 9.64e-07 | 3 |
peritoneal cavity | 9.64e-07 | 3 |
spleen primordium | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.24e-41 | 10 |
acute leukemia | 7.37e-18 | 1 |
bone marrow cancer | 1.44e-17 | 1 |
myeloma | 1.44e-17 | 1 |
lymphatic system cancer | 1.70e-17 | 1 |
lymphosarcoma | 1.70e-17 | 1 |
hematologic cancer | 1.94e-15 | 51 |
immune system cancer | 1.94e-15 | 51 |