FFCP PHASE1:Hg19::chr12:41374726..41374748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:41374726..41374748,+ | |||
|coexpression_cluster_id=C139 | |coexpression_cluster_id=C139 | ||
|description=CAGE_peak_at_chr12:41374726..41374748,+ | |description=CAGE_peak_at_chr12:41374726..41374748,+ | ||
|id=chr12:41374726..41374748,+ | |id=chr12:41374726..41374748,+ | ||
|ontology_enrichment_celltype=CL:0002594!1.59e-09!4;CL:0002166!1.14e-08!3;CL:0002605!6.24e-08!3;CL:0002580!1.23e-07!3 | |ontology_enrichment_celltype=CL:0002594!1.59e-09!4;CL:0002166!1.14e-08!3;CL:0002605!6.24e-08!3;CL:0002580!1.23e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.85e-14;3!CL:0002605;4.13e-14;3!CL:0000128;1.66e-13;7!CL:0000126;1.66e-13;7!CL:0000127;1.66e-13;7!CL:0000511;1.06e-11;1!CL:0002625;1.06e-11;1!CL:0000216;1.06e-11;1!CL:0002568;3.28e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.32e-14,3;CL:0002605,6.58e-14,3;CL:0000128,2.24e-13,7;CL:0000126,2.24e-13,7;CL:0000127,2.24e-13,7;CL:0002453,2.24e-13,7;CL:0000511,1.06e-11,1;CL:0002625,1.06e-11,1;CL:0000216,1.06e-11,1;CL:0002568,2.96e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.22e-08!14;DOID:120!2.73e-07!27 | |ontology_enrichment_disease=DOID:2394!3.22e-08!14;DOID:120!2.73e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.86e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.31e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000956!7.55e-10!25;UBERON:0000203!7.55e-10!25;UBERON:0001310!1.59e-09!4;UBERON:0000475!3.09e-09!365;UBERON:0000200!4.91e-09!6;UBERON:0001869!1.80e-08!32;UBERON:0001017!3.34e-08!82;UBERON:0001049!5.62e-08!57;UBERON:0005068!5.62e-08!57;UBERON:0006241!5.62e-08!57;UBERON:0007135!5.62e-08!57;UBERON:0002020!7.44e-08!34;UBERON:0003528!7.44e-08!34;UBERON:0001893!7.97e-08!34;UBERON:0005743!1.38e-07!86;UBERON:0000955!1.56e-07!69;UBERON:0006238!1.56e-07!69;UBERON:0000033!5.65e-07!123;UBERON:0002791!6.36e-07!33;UBERON:0001950!6.74e-07!20 | |ontology_enrichment_uberon=UBERON:0000956!7.55e-10!25;UBERON:0000203!7.55e-10!25;UBERON:0001310!1.59e-09!4;UBERON:0000475!3.09e-09!365;UBERON:0000200!4.91e-09!6;UBERON:0001869!1.80e-08!32;UBERON:0001017!3.34e-08!82;UBERON:0001049!5.62e-08!57;UBERON:0005068!5.62e-08!57;UBERON:0006241!5.62e-08!57;UBERON:0007135!5.62e-08!57;UBERON:0002020!7.44e-08!34;UBERON:0003528!7.44e-08!34;UBERON:0001893!7.97e-08!34;UBERON:0005743!1.38e-07!86;UBERON:0000955!1.56e-07!69;UBERON:0006238!1.56e-07!69;UBERON:0000033!5.65e-07!123;UBERON:0002791!6.36e-07!33;UBERON:0001950!6.74e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.00e-12;13!UBERON:0000991;5.04e-12;21!UBERON:0001136;1.06e-11;1!UBERON:0001343;1.06e-11;1!UBERON:0004910;1.06e-11;1!UBERON:0004813;1.06e-11;1!UBERON:0001708;4.45e-11;4!UBERON:0008895;4.45e-11;4!UBERON:0002119;5.17e-11;4!UBERON:0002118;3.82e-09;5!UBERON:0011159;4.87e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.21e-12,13;UBERON:0000991,5.80e-12,21;UBERON:0009196,5.80e-12,21;UBERON:0009117,5.80e-12,21;UBERON:0005564,5.80e-12,21;UBERON:0001136,1.06e-11,1;UBERON:0001343,1.06e-11,1;UBERON:0004910,1.06e-11,1;UBERON:0005154,1.06e-11,1;UBERON:0005295,1.06e-11,1;UBERON:0004813,1.06e-11,1;UBERON:0005297,1.06e-11,1;UBERON:0005294,1.06e-11,1;UBERON:0010141,1.06e-11,1;UBERON:0005891,1.06e-11,1;UBERON:0004176,2.05e-11,22;UBERON:0001708,3.46e-11,4;UBERON:0008895,3.46e-11,4;UBERON:0002119,6.65e-11,4;UBERON:0011159,3.98e-09,5;UBERON:0002118,3.98e-09,5;UBERON:0010188,9.58e-08,6;UBERON:0002539,9.58e-08,6;UBERON:0008816,9.58e-08,6;UBERON:0002323,1.64e-07,46;UBERON:0004458,5.05e-07,49 | |||
|phase1_expression=0.54503513781167,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,1.09499540058307,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.301586917234893,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,1.87467667973554,40.651675024124,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42198887333556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.3996218765488,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.153461973288062,0.280660094433074,0,0.511707249066704,2.2519548960105,0,0,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.03419649220798,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,49.9071170610515,0,0,1.88723537409386,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,1.36310417428337,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,3.66382564476516,0,1.08684069813382,0,0.797525143673985,0.521745061811734,0,0.761610424337591,3.66183659884195,0,3.22231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,1.45771421354797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.54503513781167,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,1.09499540058307,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.301586917234893,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,1.87467667973554,40.651675024124,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42198887333556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.3996218765488,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.153461973288062,0.280660094433074,0,0.511707249066704,2.2519548960105,0,0,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.03419649220798,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,49.9071170610515,0,0,1.88723537409386,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,1.36310417428337,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,3.66382564476516,0,1.08684069813382,0,0.797525143673985,0.521745061811734,0,0.761610424337591,3.66183659884195,0,3.22231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,1.45771421354797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:41374726..41374748,+ | |short_description=p@chr12:41374726..41374748,+ | ||
}} | }} |
Latest revision as of 08:26, 24 July 2015
Short description: | p@chr12:41374726..41374748, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:41374726..41374748, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.32e-14 | 3 |
astrocyte of the cerebral cortex | 6.58e-14 | 3 |
oligodendrocyte | 2.24e-13 | 7 |
macroglial cell | 2.24e-13 | 7 |
astrocyte | 2.24e-13 | 7 |
oligodendrocyte precursor cell | 2.24e-13 | 7 |
androgen binding protein secreting cell | 1.06e-11 | 1 |
seminiferous tubule epithelial cell | 1.06e-11 | 1 |
Sertoli cell | 1.06e-11 | 1 |
mesenchymal stem cell of Wharton's jelly | 2.96e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.21e-12 | 13 |
gonad | 5.80e-12 | 21 |
indifferent external genitalia | 5.80e-12 | 21 |
indifferent gonad | 5.80e-12 | 21 |
gonad primordium | 5.80e-12 | 21 |
mesothelium | 1.06e-11 | 1 |
seminiferous tubule of testis | 1.06e-11 | 1 |
epithelium of male gonad | 1.06e-11 | 1 |
epithelial cord | 1.06e-11 | 1 |
sex cord | 1.06e-11 | 1 |
seminiferous tubule epithelium | 1.06e-11 | 1 |
testis sex cord | 1.06e-11 | 1 |
genital ridge | 1.06e-11 | 1 |
primitive sex cord of indifferent gonad | 1.06e-11 | 1 |
coelomic epithelium | 1.06e-11 | 1 |
external genitalia | 2.05e-11 | 22 |
jaw skeleton | 3.46e-11 | 4 |
splanchnocranium | 3.46e-11 | 4 |
left ovary | 6.65e-11 | 4 |
primary subdivision of cranial skeletal system | 3.98e-09 | 5 |
right ovary | 3.98e-09 | 5 |
protuberance | 9.58e-08 | 6 |
pharyngeal arch | 9.58e-08 | 6 |
embryonic head | 9.58e-08 | 6 |
body cavity | 1.64e-07 | 46 |
body cavity or lining | 5.05e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.31e-12 | 14 |