FFCP PHASE1:Hg19::chr15:58790059..58790070,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8854 | |EntrezGene=8854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15472 | |HGNC=15472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560863_5end | |association_with_transcript=0bp_to_ENST00000560863_5end | ||
|cluster_id=chr15:58790059..58790070,- | |||
|coexpression_cluster_id=C148 | |coexpression_cluster_id=C148 | ||
|description=CAGE_peak_19_at_ALDH1A2_5end | |description=CAGE_peak_19_at_ALDH1A2_5end | ||
|id=chr15:58790059..58790070,- | |id=chr15:58790059..58790070,- | ||
|ontology_enrichment_celltype=CL:0002149!3.04e-09!6;CL:0002255!3.04e-09!6;CL:0000650!7.20e-09!3;CL:1000618!7.20e-09!3;CL:1001318!7.20e-09!3;CL:0002173!7.20e-09!3;CL:1000500!7.20e-09!3;CL:0002622!2.28e-08!3;CL:0002174!2.67e-07!1;CL:0000501!2.67e-07!1;CL:0000313!8.18e-07!1 | |ontology_enrichment_celltype=CL:0002149!3.04e-09!6;CL:0002255!3.04e-09!6;CL:0000650!7.20e-09!3;CL:1000618!7.20e-09!3;CL:1001318!7.20e-09!3;CL:0002173!7.20e-09!3;CL:1000500!7.20e-09!3;CL:0002622!2.28e-08!3;CL:0002174!2.67e-07!1;CL:0000501!2.67e-07!1;CL:0000313!8.18e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.47e-146;3 | |||
|ontology_enrichment_disease=DOID:4468!4.70e-13!2;DOID:3001!3.04e-09!6;DOID:193!5.58e-09!29;DOID:299!7.89e-08!25;DOID:120!3.31e-07!27;DOID:2152!8.18e-07!1 | |ontology_enrichment_disease=DOID:4468!4.70e-13!2;DOID:3001!3.04e-09!6;DOID:193!5.58e-09!29;DOID:299!7.89e-08!25;DOID:120!3.31e-07!27;DOID:2152!8.18e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!5.29e-23!12;UBERON:0002028!5.29e-23!12;UBERON:0007277!5.29e-23!12;UBERON:0004732!3.61e-21!13;UBERON:0003076!3.12e-18!15;UBERON:0003057!3.12e-18!15;UBERON:0002680!1.82e-16!9;UBERON:0001895!1.82e-16!9;UBERON:0010092!1.82e-16!9;UBERON:0002298!1.91e-11!8;UBERON:0002037!8.33e-10!6;UBERON:0006215!8.33e-10!6;UBERON:0003567!7.20e-09!3;UBERON:0003838!7.20e-09!3;UBERON:0005169!7.20e-09!3;UBERON:0002321!7.20e-09!3;UBERON:0005215!7.20e-09!3;UBERON:0002303!7.20e-09!3;UBERON:0002319!7.20e-09!3;UBERON:0000988!1.39e-08!3;UBERON:0001896!2.64e-08!3;UBERON:0005290!2.64e-08!3;UBERON:0010096!2.64e-08!3;UBERON:0006554!2.76e-07!44;UBERON:0001008!4.26e-07!45;UBERON:0004911!8.18e-07!1 | |ontology_enrichment_uberon=UBERON:0004733!5.29e-23!12;UBERON:0002028!5.29e-23!12;UBERON:0007277!5.29e-23!12;UBERON:0004732!3.61e-21!13;UBERON:0003076!3.12e-18!15;UBERON:0003057!3.12e-18!15;UBERON:0002680!1.82e-16!9;UBERON:0001895!1.82e-16!9;UBERON:0010092!1.82e-16!9;UBERON:0002298!1.91e-11!8;UBERON:0002037!8.33e-10!6;UBERON:0006215!8.33e-10!6;UBERON:0003567!7.20e-09!3;UBERON:0003838!7.20e-09!3;UBERON:0005169!7.20e-09!3;UBERON:0002321!7.20e-09!3;UBERON:0005215!7.20e-09!3;UBERON:0002303!7.20e-09!3;UBERON:0002319!7.20e-09!3;UBERON:0000988!1.39e-08!3;UBERON:0001896!2.64e-08!3;UBERON:0005290!2.64e-08!3;UBERON:0010096!2.64e-08!3;UBERON:0006554!2.76e-07!44;UBERON:0001008!4.26e-07!45;UBERON:0004911!8.18e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.47e-74;6!UBERON:0002680;9.25e-50;9!UBERON:0001895;9.25e-50;9!UBERON:0004733;1.25e-37;12!UBERON:0002028;1.25e-37;12!UBERON:0004732;7.97e-35;13!UBERON:0000073;8.28e-07;53!UBERON:0002616;8.28e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.47e-74,6;UBERON:0006215,5.47e-74,6;UBERON:0002680,9.25e-50,9;UBERON:0001895,9.25e-50,9;UBERON:0010092,9.25e-50,9;UBERON:0004733,1.26e-37,12;UBERON:0002028,1.26e-37,12;UBERON:0007277,1.26e-37,12;UBERON:0004732,7.97e-35,13;UBERON:0003076,2.45e-30,15;UBERON:0003057,2.45e-30,15;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0000955,3.10e-07,68;UBERON:0006238,3.10e-07,68 | |||
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|short_description=p19@ALDH1A2 | |short_description=p19@ALDH1A2 | ||
}} | }} |
Latest revision as of 07:42, 18 September 2015
Short description: | p19@ALDH1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ALDH1A2_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 0bp_to_ENST00000560863_5end |
EntrezGene: | ALDH1A2 |
HGNC: | 15472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.47e-74 | 6 |
rhombic lip | 5.47e-74 | 6 |
regional part of metencephalon | 9.25e-50 | 9 |
metencephalon | 9.25e-50 | 9 |
future metencephalon | 9.25e-50 | 9 |
segmental subdivision of hindbrain | 1.26e-37 | 12 |
hindbrain | 1.26e-37 | 12 |
presumptive hindbrain | 1.26e-37 | 12 |
segmental subdivision of nervous system | 7.97e-35 | 13 |
posterior neural tube | 2.45e-30 | 15 |
chordal neural plate | 2.45e-30 | 15 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
brain | 3.10e-07 | 68 |
future brain | 3.10e-07 | 68 |