FFCP PHASE1:Hg19::chr16:66945145..66945152,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:66945145..66945152,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr16:66945145..66945152,- | |description=CAGE_peak_at_chr16:66945145..66945152,- | ||
|id=chr16:66945145..66945152,- | |id=chr16:66945145..66945152,- | ||
|ontology_enrichment_celltype=CL:0002076!1.62e-14!43;CL:0000622!1.12e-11!5;CL:0002328!1.91e-11!3;CL:0002541!2.19e-11!3;CL:0002623!2.44e-11!3;CL:0000066!4.30e-10!254;CL:0000154!9.89e-10!6;CL:0000223!1.25e-09!59;CL:0000150!1.63e-09!9;CL:0002251!2.44e-09!21 | |ontology_enrichment_celltype=CL:0002076!1.62e-14!43;CL:0000622!1.12e-11!5;CL:0002328!1.91e-11!3;CL:0002541!2.19e-11!3;CL:0002623!2.44e-11!3;CL:0000066!4.30e-10!254;CL:0000154!9.89e-10!6;CL:0000223!1.25e-09!59;CL:0000150!1.63e-09!9;CL:0002251!2.44e-09!21 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.88e-23;3!CL:0002252;5.26e-18;1!CL:0000575;1.33e-09;2!CL:0000349;1.57e-08;19!CL:0002623;6.14e-07;3!CL:0002328;7.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.88e-23,3;CL:0002252,4.44e-18,1;CL:0000575,1.33e-09,2;CL:0000349,1.53e-08,19;CL:0002623,6.14e-07,3;CL:0002328,7.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.22e-17;1!UBERON:0010226;1.22e-17;1!UBERON:0008814;1.12e-09;2!UBERON:0010056;1.12e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.45e-12!72;UBERON:0000166!5.51e-12!21;UBERON:0004815!1.91e-11!3;UBERON:0002031!1.91e-11!3;UBERON:0000476!2.19e-11!3;UBERON:0000920!2.19e-11!3;UBERON:0000165!1.88e-10!28;UBERON:0000930!1.88e-10!28;UBERON:0004119!8.25e-09!169;UBERON:0000925!8.25e-09!169;UBERON:0006595!8.25e-09!169;UBERON:0002185!1.11e-08!4;UBERON:0000072!2.97e-08!46;UBERON:0003124!3.06e-08!7;UBERON:0000161!4.27e-08!35;UBERON:0000065!4.56e-08!53;UBERON:0002133!5.70e-08!2 | |ontology_enrichment_uberon=UBERON:0001004!1.45e-12!72;UBERON:0000166!5.51e-12!21;UBERON:0004815!1.91e-11!3;UBERON:0002031!1.91e-11!3;UBERON:0000476!2.19e-11!3;UBERON:0000920!2.19e-11!3;UBERON:0000165!1.88e-10!28;UBERON:0000930!1.88e-10!28;UBERON:0004119!8.25e-09!169;UBERON:0000925!8.25e-09!169;UBERON:0006595!8.25e-09!169;UBERON:0002185!1.11e-08!4;UBERON:0000072!2.97e-08!46;UBERON:0003124!3.06e-08!7;UBERON:0000161!4.27e-08!35;UBERON:0000065!4.56e-08!53;UBERON:0002133!5.70e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.88e-23;3!UBERON:0000920;1.88e-23;3!UBERON:0001043;6.44e-23;3!UBERON:0001723;6.44e-23;3!UBERON:0001033;6.44e-23;3!UBERON:0002084;1.22e-17;1!UBERON:0002082;1.22e-17;1!UBERON:0005631;1.17e-15;10!UBERON:0000158;1.17e-15;10!UBERON:0001041;2.53e-11;14!UBERON:0000020;4.58e-07;23!UBERON:0004815;7.28e-07;3!UBERON:0002031;7.28e-07;3!UBERON:0000478;7.32e-07;24!UBERON:0001032;8.59e-07;24!UBERON:0004456;8.59e-07;24!UBERON:0004151;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.88e-23,3;UBERON:0001043,5.76e-23,3;UBERON:0001723,5.76e-23,3;UBERON:0001033,5.76e-23,3;UBERON:0009143,5.76e-23,3;UBERON:0010056,5.76e-23,3;UBERON:0002084,1.44e-17,1;UBERON:0002082,1.44e-17,1;UBERON:0010226,1.44e-17,1;UBERON:0005631,2.20e-11,14;UBERON:0000158,2.20e-11,14;UBERON:0003124,1.27e-10,7;UBERON:0001042,1.47e-07,10;UBERON:0009145,1.47e-07,10;UBERON:0000166,2.02e-07,22;UBERON:0006562,5.98e-07,11;UBERON:0000478,7.17e-07,24;UBERON:0004815,7.28e-07,3;UBERON:0002031,7.28e-07,3;UBERON:0000020,8.42e-07,24;UBERON:0001032,8.42e-07,24;UBERON:0004456,8.42e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.703702806881416,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0.217294743844016,4.46601623624687,0.0915975934018623,14.3919389525031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0.0967563312890851,0,0,1.35784623083787,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.979156554036111,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.6828739083758,11.7514142508396,0,0,0,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0,0.459474497674225,0,0,0,0,0,0.426467963801962,0,0,0.124149428591716,0,0,0,3.48346796635138,1.71116650542641,0.202056159043763,0.286888821570705,0,0,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.703702806881416,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0.217294743844016,4.46601623624687,0.0915975934018623,14.3919389525031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0.0967563312890851,0,0,1.35784623083787,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.979156554036111,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.6828739083758,11.7514142508396,0,0,0,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0,0.459474497674225,0,0,0,0,0,0.426467963801962,0,0,0.124149428591716,0,0,0,3.48346796635138,1.71116650542641,0.202056159043763,0.286888821570705,0,0,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr16:66945145..66945152,- | |short_description=p@chr16:66945145..66945152,- | ||
}} | }} |
Latest revision as of 11:06, 25 July 2015
Short description: | p@chr16:66945145..66945152, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:66945145..66945152, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.88e-23 | 3 |
epithelial cell of esophagus | 4.44e-18 | 1 |
corneal epithelial cell | 1.33e-09 | 2 |
extraembryonic cell | 1.53e-08 | 19 |
acinar cell of salivary gland | 6.14e-07 | 3 |
bronchial epithelial cell | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.88e-23 | 3 |
esophagus | 5.76e-23 | 3 |
tongue | 5.76e-23 | 3 |
gustatory system | 5.76e-23 | 3 |
esophageal region | 5.76e-23 | 3 |
future tongue | 5.76e-23 | 3 |
heart left ventricle | 1.44e-17 | 1 |
cardiac ventricle | 1.44e-17 | 1 |
future cardiac ventricle | 1.44e-17 | 1 |
extraembryonic membrane | 2.20e-11 | 14 |
membranous layer | 2.20e-11 | 14 |
chorion | 1.27e-10 | 7 |
chordate pharynx | 1.47e-07 | 10 |
pharyngeal region of foregut | 1.47e-07 | 10 |
oral opening | 2.02e-07 | 22 |
pharynx | 5.98e-07 | 11 |
extraembryonic structure | 7.17e-07 | 24 |
lower respiratory tract epithelium | 7.28e-07 | 3 |
epithelium of bronchus | 7.28e-07 | 3 |
sense organ | 8.42e-07 | 24 |
sensory system | 8.42e-07 | 24 |
entire sense organ system | 8.42e-07 | 24 |