FFCP PHASE1:Hg19::chr16:87865535..87865593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8140 | |EntrezGene=8140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11063 | |HGNC=11063 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=230bp_to_BC014177_5end | |association_with_transcript=230bp_to_BC014177_5end | ||
|cluster_id=chr16:87865535..87865593,- | |||
|coexpression_cluster_id=C570 | |coexpression_cluster_id=C570 | ||
|description=CAGE_peak_5_at_SLC7A5_5end | |description=CAGE_peak_5_at_SLC7A5_5end | ||
|id=chr16:87865535..87865593,- | |id=chr16:87865535..87865593,- | ||
|ontology_enrichment_celltype=CL:0000066!1.54e-19!254;CL:0002076!3.02e-12!43;CL:0000223!1.00e-11!59;CL:0000548!3.37e-10!679;CL:0000004!3.37e-10!679;CL:0000255!3.37e-10!679;CL:0000012!4.14e-10!682;CL:0000063!1.95e-08!578;CL:0002368!7.09e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.54e-19!254;CL:0002076!3.02e-12!43;CL:0000223!1.00e-11!59;CL:0000548!3.37e-10!679;CL:0000004!3.37e-10!679;CL:0000255!3.37e-10!679;CL:0000012!4.14e-10!682;CL:0000063!1.95e-08!578;CL:0002368!7.09e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.59e-10;10!CL:0002076;4.54e-09;42!CL:0000147;4.61e-09;14!CL:0002231;3.64e-08;3!CL:0002077;1.16e-07;34!CL:0002567;1.23e-07;3!CL:0002368;1.60e-07;13!CL:0002577;9.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.16e-16,253;CL:0002076,1.06e-12,42;CL:0000223,2.48e-11,58;CL:0000148,4.34e-10,10;CL:0000541,4.34e-10,10;CL:0000147,5.21e-09,14;CL:0002231,3.64e-08,3;CL:0002077,3.78e-08,34;CL:0002368,9.59e-08,13;CL:0002567,9.83e-08,3;CL:0002577,6.11e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;3.67e-07;58 | |||
|ontology_enrichment_disease=DOID:305!4.83e-08!106 | |ontology_enrichment_disease=DOID:305!4.83e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.43e-08!169;UBERON:0000925!1.43e-08!169;UBERON:0006595!1.43e-08!169 | |ontology_enrichment_uberon=UBERON:0004119!1.43e-08!169;UBERON:0000925!1.43e-08!169;UBERON:0006595!1.43e-08!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.38e-09;4!UBERON:0004785;5.38e-09;4!UBERON:0003729;6.86e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.94e-09,4;UBERON:0004785,5.94e-09,4;UBERON:0003729,8.00e-09,13 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0.982935746006035,0.697801167972428,1.09220686065086,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0.408001382488506,0.940364164434263,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,1.83884244895785,0.90361775633475,1.84877005083394,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0.512321413058201,0.47296445977717,0.689491361473237,0,1.35426486594342,0.188242339542605,0,0,1.22433556948361,1.28371610830437,0.639337125799041,0,0.398927315243264,0,1.45104619314292,0,0.622822248995575,0,0,0.217188844705117,1.21079900526674,0.368277635987565,0.632924774881769,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,1.60464117470104,0.144824403882799,0,0,0.383587685530591,1.0843174571537,0.50133791063589,1.59331170856906,0,1.94653948121054,0.0945348171640679,0,0.087834785693126,0.130979075497713,3.64295288292542,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.825354125820202,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,3.92484646928281,0,1.01304409331664,0,0.860509862246441,1.41867352879343,0.560677600142307,0,1.72667283892012,0,0,0,0,0,0.468642863667593,0,0,1.04614076386261,0.117434498643765,0.161872944368132,0.421352420106746,0,0.245668634623536,0.103325781175765,1.18800285728205,1.23633464639278,0.910161361938026,0.718618141816238,0,0.250237039743928,0,0,0.612975591598039,0.300476117813194,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0.558350568994769,0.168776332241266,0.389748020644795,0,0.0920498986422993,0,0,0.302256294682921,0,1.93260853163297,0.272746120590835,0.860413786167011,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0.721879481669586,0.828147600278907,0.842923450390509,1.44606617930089,1.7647035637183,1.30727666455444,0.474541238222193,0.943819157121151,0.98110732562673,0,0,4.20725321410337,0,2.94017422771084,0,0,0.590789906681404,0.441463099414651,0.368965315629341,0,4.17051084552777,1.1240175325762,0.904760751704678,1.20364978706088,0.977424915930974,0,4.3299402607582,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0.283550194484773,1.79117045405697,1.74380363108377,0.766765358330422,0,0.352193736052904,0.207328115540772,0.288239906833923,0.75745460055828,1.14296209725904,1.52795370223311,8.20522130470329,5.13217338068116,2.15937734676979,2.70308752059526,3.14409075893636,0.112131084345361,0,0.36669142910475,0.517086863031111,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0.205476322550383,0,0.112085143993527,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,1.00034104211935,0.542530047399471,0.415941723061614,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,0.391602314925481,0.343143423810856,0,0.215714200818617,0.426910231213777,1.5156378572313,1.66435439510497,2.11673205330776,2.23297027036899,0.153461973288062,0.280660094433074,0.768834895534206,0,1.44768529029247,0,0,0,0.0821271560138091,0.519254429183621,0,3.50492403815704,7.41873940122154,15.2854441633588,0.68888668898764,0.546273504020151,0.393373244878272,0.451199612907412,0.15403067420883,0.784349769176855,0,0.105551628892876,1.13733384070897,0,0,0,0.270946437543853,0,0,0.831076008928724,0,0.438519753291869,0.522870902049801,0.256450125116389,0,3.57916234130733,0,0.0915694648183434,0.495056999523528,3.44559322797703,7.80072295243825,0,3.67348729510063,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.712256285173899,6.28082678371717,4.61256161676255,0.382838137483752,5.76599350876635,0.929691098594572,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0,0.117812402345686,0,1.58510321173008,0.421258456238981,0.48763373908959,0.974853958525138,0,0.9554993798559,2.2624869112594,0,0.551365343546124,1.32687795048244,0,0,0,0.405820753925408,0.30982349809975,0,0,0.196498082026242,0.35667105148125,0,0.422215270595328,0.658589785919804,0.379473173765715,0,0.769776901804097,1.34060455107157,5.44454924306613,0.376575203107117,4.73555909938353,3.36942951335251,3.10401107475673,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0.371606350251437,0.144269212976445,0.711418433484141,0.478278818186467,0.199579371432817,0,0.846694330895531,0,0,0,0.47003968731907,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0.37428108081644,0,0,0.111443384277478,0,0.23874448473769,0.2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| ||
|short_description=p5@SLC7A5 | |short_description=p5@SLC7A5 | ||
}} | }} |
Latest revision as of 08:13, 18 September 2015
Short description: | p5@SLC7A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC7A5_5end |
Coexpression cluster: | C570_oral_Prostate_Esophageal_Mammary_Corneal_Keratinocyte_Small |
Association with transcript: | 230bp_to_BC014177_5end |
EntrezGene: | SLC7A5 |
HGNC: | 11063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.16e-16 | 253 |
endo-epithelial cell | 1.06e-12 | 42 |
endodermal cell | 2.48e-11 | 58 |
melanocyte | 4.34e-10 | 10 |
melanoblast | 4.34e-10 | 10 |
pigment cell | 5.21e-09 | 14 |
epithelial cell of prostate | 3.64e-08 | 3 |
ecto-epithelial cell | 3.78e-08 | 34 |
respiratory epithelial cell | 9.59e-08 | 13 |
light melanocyte | 9.83e-08 | 3 |
placental epithelial cell | 6.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.94e-09 | 4 |
respiratory system mucosa | 5.94e-09 | 4 |
mouth mucosa | 8.00e-09 | 13 |