FFCP PHASE1:Hg19::chr17:38599805..38599839,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38599805..38599839,- | |||
|coexpression_cluster_id=C353 | |coexpression_cluster_id=C353 | ||
|description=CAGE_peak_at_chr17:38599805..38599839,- | |description=CAGE_peak_at_chr17:38599805..38599839,- | ||
|id=chr17:38599805..38599839,- | |id=chr17:38599805..38599839,- | ||
|ontology_enrichment_celltype=CL:0000055!2.70e-15!180;CL:0000057!1.87e-14!75;CL:0000222!1.96e-07!119 | |ontology_enrichment_celltype=CL:0000055!2.70e-15!180;CL:0000057!1.87e-14!75;CL:0000222!1.96e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000499;2.62e-07;28!CL:0000669;8.77e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.65e-08,76;CL:0000499,2.99e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!9.73e-13!216;UBERON:0005256!6.10e-10!143;UBERON:0000490!9.99e-09!138;UBERON:0000475!6.51e-08!365;UBERON:0000481!1.18e-07!347;UBERON:0000914!1.73e-07!83;UBERON:0002329!1.73e-07!83;UBERON:0003077!1.73e-07!83;UBERON:0003059!1.73e-07!83;UBERON:0007282!1.73e-07!83;UBERON:0009618!1.73e-07!83;UBERON:0007285!1.73e-07!83;UBERON:0003914!3.06e-07!118 | |ontology_enrichment_uberon=UBERON:0002100!9.73e-13!216;UBERON:0005256!6.10e-10!143;UBERON:0000490!9.99e-09!138;UBERON:0000475!6.51e-08!365;UBERON:0000481!1.18e-07!347;UBERON:0000914!1.73e-07!83;UBERON:0002329!1.73e-07!83;UBERON:0003077!1.73e-07!83;UBERON:0003059!1.73e-07!83;UBERON:0007282!1.73e-07!83;UBERON:0009618!1.73e-07!83;UBERON:0007285!1.73e-07!83;UBERON:0003914!3.06e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.65e-10;8!UBERON:0000982;1.65e-10;8!UBERON:0004770;1.65e-10;8!UBERON:0011135;5.82e-09;5!UBERON:0002216;5.82e-09;5!UBERON:0011134;5.82e-09;5!UBERON:0002209;5.82e-09;5!UBERON:0002213;5.82e-09;5!UBERON:0007844;5.82e-09;5!UBERON:0011138;5.82e-09;5!UBERON:0001130;5.82e-09;5!UBERON:0001066;5.82e-09;5!UBERON:0001468;5.82e-09;5!UBERON:0004457;3.44e-08;9!UBERON:0000042;3.44e-08;9!UBERON:0000075;1.96e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.21e-10,8;UBERON:0000982,1.21e-10,8;UBERON:0004770,1.21e-10,8;UBERON:0011135,4.21e-09,5;UBERON:0002216,4.21e-09,5;UBERON:0011134,4.21e-09,5;UBERON:0002209,4.21e-09,5;UBERON:0002213,4.21e-09,5;UBERON:0005856,4.21e-09,5;UBERON:0005866,4.21e-09,5;UBERON:0005863,4.21e-09,5;UBERON:0007844,4.21e-09,5;UBERON:0011138,4.21e-09,5;UBERON:0001130,4.21e-09,5;UBERON:0001066,4.21e-09,5;UBERON:0001468,4.21e-09,5;UBERON:0000075,1.67e-07,16 | |||
|phase1_expression=1.09007027562334,2.5692062866918,1.26858963686374,5.00366491765652,0.446961094427288,1.74467704820074,5.06599756336621,1.89515962028049,4.96252693579693,0.245733936501509,0,0,0,1.8564952944007,4.30816588446291,0,0,0,0.975865597581014,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,5.06014813338393,1.00267582127178,8.83563765661025,0,1.94653948121054,0.189069634328136,0.665188192387692,0.43917392846563,1.0478326039817,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0.56530794192401,0.838998872419812,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,1.70843440283719,0,0.81014194788176,0.17859945656816,0.44905874525234,0.563057402416611,0,0,0.732806975721629,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0.573673241497627,0.354668382198357,3.92474320099615,1.06748995729705,0.98667019366864,0.933633106199299,0.404132016209064,0,0.454072282934794,2.88087962239999,0.234321431833797,1.24864030732128,0,1.04614076386261,0.117434498643765,0,0,1.63323337003915,0.859840221182376,5.47626640231557,5.94001428641027,6.18167323196392,0,0.718618141816238,0,0.875829639103749,0.831192346452549,4.38977620880838,2.45190236639216,10.817140241275,0,0.538168907066586,1.92201649936711,1.27159140695737,1.20036438433761,0.206105058476878,0.515281080091258,1.11670113798954,0.168776332241266,0.0974370051611986,0.504867548488229,0.736399189138395,0.484938170456436,0.710019185033229,0.201504196455281,0.67824236924195,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,1.92972281457866,0,0,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,2.36315962672562,0,0.122988438543114,1.02940686179115,0,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.115930404975077,0.70445216541493,0.144366447761074,0,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.66004457238855,0,0,0,1.06375246633948,0,1.02882949704857,0,1.0656887160644,1.00084595560703,1.08524321078289,0,0.325736184293735,1.77695974371273,1.58390374586686,0.301439377059586,0.871533458600294,4.69873058555668,0,0,0,1.19812427745791,0,0,1.88215698667853,2.4657158706046,1.25342674267927,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,8.09763845346323,5.00170521059677,3.25518028439683,1.45579603071565,3.92543775353756,2.68094105557689,3.27995961979597,1.20378439891088,0,1.03473071292505,1.99267679560631,1.10621501125022,1.04260337361699,2.15381273209015,2.05886054286514,0,0,0,0.606255142892519,0,0.907170879989041,0.496215615637554,0.460385919864187,3.08726103876381,1.66580894032411,1.53512174720011,2.0911009748669,1.48418066444991,0.771048469013278,1.06537035187876,0.164254312027618,0.519254429183621,1.16210378459959,0,0.40101294060657,0,0.34444334449382,0.728364672026868,2.49136388422906,0.451199612907412,0.15403067420883,0.784349769176855,0,0,0,0,1.29549549661284,1.54227252690289,1.08378575017541,2.50844886927427,0,0.831076008928724,0.671624264166535,0,0,0,0,0,1.54561517471583,0,0.082509499920588,0,0,0,0.676695028044854,0.770243085573222,0.15350367472613,0.275673144969061,0.644521469209642,1.74020032697074,0.426133137080504,0.445160178233687,0,0.384380134730212,0,0.2023155617111,0.929691098594572,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.429374660225974,2.60510858551767,2.84741482246853,3.24071329670502,1.02359116524534,3.85145089230528,1.27281299170375,0.78494864019923,0.179872457583315,0.823611089208164,0.942499218765491,0.808729926293264,0,0.421258456238981,0,1.21856744815642,0,0.545999645631943,2.12108147930569,0,1.10273068709225,1.99031692572366,1.75380354101505,0,1.9676842561399,0,0,0,0,0.196498082026242,0,0.354761064070598,13.7219962943482,5.92730807327823,0,1.04980416073495,0,0,0,1.60044461320525,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0.296964680832639,0,0,0,0.779160935160341,0,0,0.796991953004279,0.276283915531148,0,0,0,0.622079175323615,0.0898683511473268,0,0,2.17015492401254,0,1.11136990144637,0,0.0927680981618513,0,0,0,4.34999745260876,0.1137934482855,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,2.00070672109872,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0.335643173951685,0,0.158936578980379,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,2.41981432097328,0,1.64285107034069,0,0,1.32930774541437,0,1.56966459203613,1.19472429772959,0,0,0,0,0.261177619741208,0.52418000472609,0,0,0,0,1.06687918137261,0,0.451961481561065,0,0.19871461170299,0,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| ||
|short_description=p@chr17:38599805..38599839,- | |short_description=p@chr17:38599805..38599839,- | ||
}} | }} |
Latest revision as of 16:27, 25 July 2015
Short description: | p@chr17:38599805..38599839, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38599805..38599839, - |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.65e-08 | 76 |
stromal cell | 2.99e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
articulation | 1.21e-10 | 8 |
skeletal joint | 1.21e-10 | 8 |
articular system | 1.21e-10 | 8 |
intervertebral cartilage | 4.21e-09 | 5 |
symphysis | 4.21e-09 | 5 |
nonsynovial joint | 4.21e-09 | 5 |
fibrous joint | 4.21e-09 | 5 |
cartilaginous joint | 4.21e-09 | 5 |
developing mesenchymal condensation | 4.21e-09 | 5 |
pre-cartilage condensation | 4.21e-09 | 5 |
cartilaginous condensation | 4.21e-09 | 5 |
cartilage element | 4.21e-09 | 5 |
post-cranial axial skeletal system | 4.21e-09 | 5 |
vertebral column | 4.21e-09 | 5 |
intervertebral disk | 4.21e-09 | 5 |
intervertebral joint | 4.21e-09 | 5 |
subdivision of skeletal system | 1.67e-07 | 16 |