FFCP PHASE1:Hg19::chr18:19748421..19748445,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:19748421..19748445,- | |||
|coexpression_cluster_id=C238 | |coexpression_cluster_id=C238 | ||
|description=CAGE_peak_at_chr18:19748421..19748445,- | |description=CAGE_peak_at_chr18:19748421..19748445,- | ||
|id=chr18:19748421..19748445,- | |id=chr18:19748421..19748445,- | ||
|ontology_enrichment_celltype=CL:1000306!9.40e-08!4;CL:0002547!9.40e-08!4 | |ontology_enrichment_celltype=CL:1000306!9.40e-08!4;CL:0002547!9.40e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.98e-12;4!CL:0002547;1.98e-12;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.99e-12,4;CL:0002547,2.99e-12,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.76e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;6.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.76e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!4.52e-18!27;UBERON:0003914!1.94e-14!118;UBERON:0000948!8.30e-14!24;UBERON:0005498!8.30e-14!24;UBERON:0004140!8.30e-14!24;UBERON:0009881!8.30e-14!24;UBERON:0004141!8.30e-14!24;UBERON:0003084!8.30e-14!24;UBERON:0007005!8.30e-14!24;UBERON:0004139!8.30e-14!24;UBERON:0004291!8.30e-14!24;UBERON:0004872!4.42e-13!84;UBERON:0005409!1.93e-11!35;UBERON:0004921!2.39e-09!129;UBERON:0004185!2.39e-09!129;UBERON:0000025!2.79e-08!194;UBERON:0001009!2.85e-08!113;UBERON:0000415!9.40e-08!4;UBERON:0007240!9.40e-08!4;UBERON:0005742!9.40e-08!4;UBERON:0005734!9.40e-08!4;UBERON:0004664!9.40e-08!4;UBERON:0004663!9.40e-08!4;UBERON:0001981!1.65e-07!60;UBERON:0007500!1.65e-07!60;UBERON:0004537!1.65e-07!60;UBERON:0006965!1.65e-07!60;UBERON:0001637!3.18e-07!42;UBERON:0003509!3.18e-07!42;UBERON:0004572!3.18e-07!42;UBERON:0000945!3.70e-07!8;UBERON:0010039!3.70e-07!8;UBERON:0000160!8.69e-07!27;UBERON:0001007!8.91e-07!155;UBERON:0001555!8.91e-07!155;UBERON:0007026!8.91e-07!155 | |ontology_enrichment_uberon=UBERON:0007100!4.52e-18!27;UBERON:0003914!1.94e-14!118;UBERON:0000948!8.30e-14!24;UBERON:0005498!8.30e-14!24;UBERON:0004140!8.30e-14!24;UBERON:0009881!8.30e-14!24;UBERON:0004141!8.30e-14!24;UBERON:0003084!8.30e-14!24;UBERON:0007005!8.30e-14!24;UBERON:0004139!8.30e-14!24;UBERON:0004291!8.30e-14!24;UBERON:0004872!4.42e-13!84;UBERON:0005409!1.93e-11!35;UBERON:0004921!2.39e-09!129;UBERON:0004185!2.39e-09!129;UBERON:0000025!2.79e-08!194;UBERON:0001009!2.85e-08!113;UBERON:0000415!9.40e-08!4;UBERON:0007240!9.40e-08!4;UBERON:0005742!9.40e-08!4;UBERON:0005734!9.40e-08!4;UBERON:0004664!9.40e-08!4;UBERON:0004663!9.40e-08!4;UBERON:0001981!1.65e-07!60;UBERON:0007500!1.65e-07!60;UBERON:0004537!1.65e-07!60;UBERON:0006965!1.65e-07!60;UBERON:0001637!3.18e-07!42;UBERON:0003509!3.18e-07!42;UBERON:0004572!3.18e-07!42;UBERON:0000945!3.70e-07!8;UBERON:0010039!3.70e-07!8;UBERON:0000160!8.69e-07!27;UBERON:0001007!8.91e-07!155;UBERON:0001555!8.91e-07!155;UBERON:0007026!8.91e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.79e-21;22!UBERON:0000160;3.15e-17;17!UBERON:0004797;1.98e-12;4!UBERON:0000415;1.98e-12;4!UBERON:0007240;1.98e-12;4!UBERON:0005742;1.98e-12;4!UBERON:0005734;1.98e-12;4!UBERON:0004664;1.98e-12;4!UBERON:0004663;1.98e-12;4!UBERON:0007100;2.25e-12;25!UBERON:0004921;1.00e-11;33!UBERON:0002108;3.58e-10;4!UBERON:0003978;7.63e-08;3!UBERON:0000946;7.63e-08;3!UBERON:0000059;1.25e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.00e-22,25;UBERON:0004797,1.63e-18,7;UBERON:0000160,2.54e-17,17;UBERON:0007100,2.63e-14,27;UBERON:0000415,2.99e-12,4;UBERON:0007240,2.99e-12,4;UBERON:0005742,2.99e-12,4;UBERON:0005734,2.99e-12,4;UBERON:0004664,2.99e-12,4;UBERON:0004663,2.99e-12,4;UBERON:0002108,2.93e-10,4;UBERON:0003978,5.22e-08,3;UBERON:0009751,5.22e-08,3;UBERON:0000946,5.22e-08,3;UBERON:0002523,5.22e-08,3;UBERON:0005983,5.22e-08,3;UBERON:0002165,5.22e-08,3;UBERON:0002062,5.22e-08,3;UBERON:0007280,5.22e-08,3;UBERON:0000059,1.10e-07,11;UBERON:0000948,2.80e-07,24;UBERON:0005498,2.80e-07,24;UBERON:0004140,2.80e-07,24;UBERON:0009881,2.80e-07,24;UBERON:0004141,2.80e-07,24;UBERON:0003084,2.80e-07,24;UBERON:0007005,2.80e-07,24;UBERON:0004139,2.80e-07,24;UBERON:0004291,2.80e-07,24 | |||
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| ||
|short_description=p@chr18:19748421..19748445,- | |short_description=p@chr18:19748421..19748445,- | ||
}} | }} |
Latest revision as of 23:52, 25 July 2015
Short description: | p@chr18:19748421..19748445, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:19748421..19748445, - |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.99e-12 | 4 |
fibroblast of the aortic adventitia | 2.99e-12 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.00e-22 | 25 |
blood vessel layer | 1.63e-18 | 7 |
intestine | 2.54e-17 | 17 |
primary circulatory organ | 2.63e-14 | 27 |
artery wall | 2.99e-12 | 4 |
tunica adventitia of artery | 2.99e-12 | 4 |
adventitia | 2.99e-12 | 4 |
tunica adventitia of blood vessel | 2.99e-12 | 4 |
aorta tunica adventitia | 2.99e-12 | 4 |
aorta wall | 2.99e-12 | 4 |
small intestine | 2.93e-10 | 4 |
valve | 5.22e-08 | 3 |
cardiac mesenchyme | 5.22e-08 | 3 |
cardial valve | 5.22e-08 | 3 |
tunica intima | 5.22e-08 | 3 |
heart layer | 5.22e-08 | 3 |
endocardium | 5.22e-08 | 3 |
endocardial cushion | 5.22e-08 | 3 |
presumptive endocardium | 5.22e-08 | 3 |
large intestine | 1.10e-07 | 11 |
heart | 2.80e-07 | 24 |
primitive heart tube | 2.80e-07 | 24 |
primary heart field | 2.80e-07 | 24 |
anterior lateral plate mesoderm | 2.80e-07 | 24 |
heart tube | 2.80e-07 | 24 |
heart primordium | 2.80e-07 | 24 |
cardiac mesoderm | 2.80e-07 | 24 |
cardiogenic plate | 2.80e-07 | 24 |
heart rudiment | 2.80e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.76e-12 | 2 |