FFCP PHASE1:Hg19::chr18:53169326..53169330,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:53169326..53169330,- | |||
|coexpression_cluster_id=C3728 | |coexpression_cluster_id=C3728 | ||
|description=CAGE_peak_at_chr18:53169326..53169330,- | |description=CAGE_peak_at_chr18:53169326..53169330,- | ||
|id=chr18:53169326..53169330,- | |id=chr18:53169326..53169330,- | ||
|ontology_enrichment_celltype=CL:0002334!2.08e-08!12;CL:0002144!2.69e-07!3;CL:0002582!4.89e-07!3 | |ontology_enrichment_celltype=CL:0002334!2.08e-08!12;CL:0002144!2.69e-07!3;CL:0002582!4.89e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.18e-12;55!CL:0000048;4.60e-11;58!CL:0000228;9.96e-11;1!CL:0002557;9.96e-11;1!CL:0002372;9.96e-11;1!CL:0000569;2.48e-10;4!CL:0000723;3.87e-10;61!CL:0000034;2.79e-09;69!CL:0002138;3.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,9.05e-11,1;CL:0002372,9.05e-11,1;CL:0002557,1.10e-10,1;CL:0000569,1.69e-10,4;CL:0000011,1.69e-10,4;CL:0005020,4.58e-07,6;CL:0002138,4.58e-07,6;CL:0005022,4.58e-07,6;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000011;2.48e-10;4!CL:0005022;3.57e-07;6 | |||
|ontology_enrichment_disease=DOID:2394!8.27e-23!14;DOID:120!1.88e-16!27;DOID:193!5.07e-15!29 | |ontology_enrichment_disease=DOID:2394!8.27e-23!14;DOID:120!1.88e-16!27;DOID:193!5.07e-15!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.05e-43;14!DOID:120;1.05e-27;27!DOID:193;1.02e-25;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.45e-43,14;DOID:120,8.67e-28,27;DOID:193,8.58e-26,29 | |||
|ontology_enrichment_uberon=UBERON:0002118!1.21e-12!5;UBERON:0004532!1.21e-12!5;UBERON:0000992!5.04e-11!13;UBERON:0001915!2.69e-07!3;UBERON:0001982!2.69e-07!3 | |ontology_enrichment_uberon=UBERON:0002118!1.21e-12!5;UBERON:0004532!1.21e-12!5;UBERON:0000992!5.04e-11!13;UBERON:0001915!2.69e-07!3;UBERON:0001982!2.69e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;2.84e-31;5!UBERON:0000992;1.44e-26;13!UBERON:0000991;2.61e-16;21!UBERON:0003134;4.76e-12;33!UBERON:0002119;8.03e-11;4!UBERON:0000474;2.87e-08;37!UBERON:0003100;3.20e-08;41!UBERON:0003133;2.44e-07;44!UBERON:0004458;5.85e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.66e-31,5;UBERON:0000992,1.03e-26,13;UBERON:0000991,2.13e-16,21;UBERON:0009196,2.13e-16,21;UBERON:0009117,2.13e-16,21;UBERON:0005564,2.13e-16,21;UBERON:0004176,1.24e-15,22;UBERON:0003134,3.32e-12,37;UBERON:0000474,3.32e-12,37;UBERON:0003100,6.07e-11,41;UBERON:0002119,7.84e-11,4;UBERON:0002323,1.24e-09,46;UBERON:0003133,3.07e-09,48;UBERON:0004458,5.37e-09,49;UBERON:0003886,4.29e-08,54;UBERON:0005156,2.24e-07,59;UBERON:0000990,2.24e-07,59;UBERON:0002553,4.44e-07,61 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.794455084879313,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24775401476023,0.538168907066586,0,0,0,0.206105058476878,1.03056216018252,0,0.506328996723799,0.0974370051611986,0.252433774244115,0,0,2.13005755509969,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,1.01056513432752,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,2.30192959932094,0,0,1.02341449813341,0,0,0.771048469013278,0.532685175939381,0.164254312027618,0.519254429183621,0.348631135379878,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0.228840068396924,0,1.5543720058278,1.62640664988597,3.50452887760145,0,7.76314784381297,0.414706207840855,0.53168342911599,1.04349012362347,3.30566739793881,0.380805212168795,5.2893195316606,8.54688698252029,0.537052785212442,1.85613503951397,2.3885753321917,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857440047187092,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,1.5510319283216,0.955538938977433,0,0,0,0,0.307988420568741,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.794455084879313,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24775401476023,0.538168907066586,0,0,0,0.206105058476878,1.03056216018252,0,0.506328996723799,0.0974370051611986,0.252433774244115,0,0,2.13005755509969,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,1.01056513432752,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,2.30192959932094,0,0,1.02341449813341,0,0,0.771048469013278,0.532685175939381,0.164254312027618,0.519254429183621,0.348631135379878,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0.228840068396924,0,1.5543720058278,1.62640664988597,3.50452887760145,0,7.76314784381297,0.414706207840855,0.53168342911599,1.04349012362347,3.30566739793881,0.380805212168795,5.2893195316606,8.54688698252029,0.537052785212442,1.85613503951397,2.3885753321917,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857440047187092,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,1.5510319283216,0.955538938977433,0,0,0,0,0.307988420568741,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr18:53169326..53169330,- | |short_description=p@chr18:53169326..53169330,- | ||
}} | }} |
Latest revision as of 01:24, 26 July 2015
Short description: | p@chr18:53169326..53169330, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:53169326..53169330, - |
Coexpression cluster: | C3728_mesenchymal_Preadipocyte_Fibroblast_chorionic_Hair_cord_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 9.05e-11 | 1 |
myotube | 9.05e-11 | 1 |
fibroblast of pulmonary artery | 1.10e-10 | 1 |
cardiac mesenchymal cell | 1.69e-10 | 4 |
migratory trunk neural crest cell | 1.69e-10 | 4 |
lymphangioblast | 4.58e-07 | 6 |
endothelial cell of lymphatic vessel | 4.58e-07 | 6 |
vascular lymphangioblast | 4.58e-07 | 6 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
right ovary | 1.66e-31 | 5 |
female gonad | 1.03e-26 | 13 |
gonad | 2.13e-16 | 21 |
indifferent external genitalia | 2.13e-16 | 21 |
indifferent gonad | 2.13e-16 | 21 |
gonad primordium | 2.13e-16 | 21 |
external genitalia | 1.24e-15 | 22 |
female reproductive organ | 3.32e-12 | 37 |
female reproductive system | 3.32e-12 | 37 |
female organism | 6.07e-11 | 41 |
left ovary | 7.84e-11 | 4 |
body cavity | 1.24e-09 | 46 |
reproductive organ | 3.07e-09 | 48 |
body cavity or lining | 5.37e-09 | 49 |
body cavity precursor | 4.29e-08 | 54 |
reproductive structure | 2.24e-07 | 59 |
reproductive system | 2.24e-07 | 59 |
anatomical cavity | 4.44e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.45e-43 | 14 |
female reproductive organ cancer | 8.67e-28 | 27 |
reproductive organ cancer | 8.58e-26 | 29 |