FFCP PHASE1:Hg19::chr18:60873231..60873243,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:60873231..60873243,+ | |||
|coexpression_cluster_id=C1100 | |coexpression_cluster_id=C1100 | ||
|description=CAGE_peak_at_chr18:60873231..60873243,+ | |description=CAGE_peak_at_chr18:60873231..60873243,+ | ||
|id=chr18:60873231..60873243,+ | |id=chr18:60873231..60873243,+ | ||
|ontology_enrichment_celltype=CL:0000084!5.55e-14!25;CL:0000827!5.55e-14!25;CL:0000791!2.10e-11!18;CL:0000789!2.10e-11!18;CL:0002420!2.10e-11!18;CL:0002419!2.10e-11!18;CL:0000790!2.10e-11!18;CL:0000838!1.51e-09!52;CL:0000542!2.46e-09!53;CL:0000051!2.46e-09!53;CL:0000625!1.06e-08!11;CL:0002127!9.91e-08!1;CL:0000914!9.91e-08!1;CL:0000911!9.91e-08!1;CL:0000814!9.91e-08!1;CL:0002042!9.91e-08!1;CL:0002039!9.91e-08!1;CL:0002040!9.91e-08!1;CL:0002041!9.91e-08!1 | |ontology_enrichment_celltype=CL:0000084!5.55e-14!25;CL:0000827!5.55e-14!25;CL:0000791!2.10e-11!18;CL:0000789!2.10e-11!18;CL:0002420!2.10e-11!18;CL:0002419!2.10e-11!18;CL:0000790!2.10e-11!18;CL:0000838!1.51e-09!52;CL:0000542!2.46e-09!53;CL:0000051!2.46e-09!53;CL:0000625!1.06e-08!11;CL:0002127!9.91e-08!1;CL:0000914!9.91e-08!1;CL:0000911!9.91e-08!1;CL:0000814!9.91e-08!1;CL:0002042!9.91e-08!1;CL:0002039!9.91e-08!1;CL:0002040!9.91e-08!1;CL:0002041!9.91e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.66e-18;1!CL:0000911;2.66e-18;1!CL:0000814;2.66e-18;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.66e-18,1;CL:0000914,2.66e-18,1;CL:0000911,2.66e-18,1;CL:0000814,2.66e-18,1;CL:0002042,2.66e-18,1;CL:0002039,2.66e-18,1;CL:0002040,2.66e-18,1;CL:0002041,2.66e-18,1;CL:0000893,7.98e-10,2;CL:0002489,7.98e-10,2;CL:0000809,7.98e-10,2;CL:0000808,7.98e-10,2;CL:0000894,7.98e-10,2;CL:0000806,7.98e-10,2;CL:0000807,7.98e-10,2;CL:0000805,7.98e-10,2;CL:0002425,7.98e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002425;7.98e-10;2 | |||
|ontology_enrichment_disease=DOID:9119!2.23e-07!1;DOID:0060060!2.37e-07!1;DOID:0060061!2.37e-07!1;DOID:8691!2.37e-07!1 | |ontology_enrichment_disease=DOID:9119!2.23e-07!1;DOID:0060060!2.37e-07!1;DOID:0060061!2.37e-07!1;DOID:8691!2.37e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.78e-08!7;UBERON:0002370!7.20e-07!4;UBERON:0005058!7.20e-07!4;UBERON:0009113!7.20e-07!4;UBERON:0003295!7.20e-07!4;UBERON:0005562!7.20e-07!4 | |ontology_enrichment_uberon=UBERON:0004177!4.78e-08!7;UBERON:0002370!7.20e-07!4;UBERON:0005058!7.20e-07!4;UBERON:0009113!7.20e-07!4;UBERON:0003295!7.20e-07!4;UBERON:0005562!7.20e-07!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr18:60873231..60873243,+ | |short_description=p@chr18:60873231..60873243,+ | ||
}} | }} |
Latest revision as of 01:48, 26 July 2015
Short description: | p@chr18:60873231..60873243, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:60873231..60873243, + |
Coexpression cluster: | C1100_CD4_NK_anaplastic_acute_Hodgkin_adult_cord |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.66e-18 | 1 |
immature NK T cell | 2.66e-18 | 1 |
effector T cell | 2.66e-18 | 1 |
mature NK T cell | 2.66e-18 | 1 |
immature NK T cell stage IV | 2.66e-18 | 1 |
immature NK T cell stage I | 2.66e-18 | 1 |
immature NK T cell stage II | 2.66e-18 | 1 |
immature NK T cell stage III | 2.66e-18 | 1 |
thymocyte | 7.98e-10 | 2 |
double negative thymocyte | 7.98e-10 | 2 |
double-positive, alpha-beta thymocyte | 7.98e-10 | 2 |
DN4 thymocyte | 7.98e-10 | 2 |
DN1 thymic pro-T cell | 7.98e-10 | 2 |
DN2 thymocyte | 7.98e-10 | 2 |
DN3 thymocyte | 7.98e-10 | 2 |
immature single positive thymocyte | 7.98e-10 | 2 |
early T lineage precursor | 7.98e-10 | 2 |