FFCP PHASE1:Hg19::chr1:12679100..12679121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:12679100..12679121,- | |||
|coexpression_cluster_id=C3854 | |coexpression_cluster_id=C3854 | ||
|description=CAGE_peak_at_chr1:12679100..12679121,- | |description=CAGE_peak_at_chr1:12679100..12679121,- | ||
|id=chr1:12679100..12679121,- | |id=chr1:12679100..12679121,- | ||
|ontology_enrichment_celltype=CL:0000359!7.48e-12!32;CL:0000187!2.37e-10!54;CL:0000183!4.77e-10!59;CL:0000192!5.75e-10!42;CL:0000514!5.75e-10!42;CL:0000680!2.10e-09!57;CL:0000056!2.10e-09!57;CL:0000355!2.10e-09!57;CL:0000393!2.39e-08!60;CL:0000211!2.39e-08!60;CL:0000222!3.07e-08!119 | |ontology_enrichment_celltype=CL:0000359!7.48e-12!32;CL:0000187!2.37e-10!54;CL:0000183!4.77e-10!59;CL:0000192!5.75e-10!42;CL:0000514!5.75e-10!42;CL:0000680!2.10e-09!57;CL:0000056!2.10e-09!57;CL:0000355!2.10e-09!57;CL:0000393!2.39e-08!60;CL:0000211!2.39e-08!60;CL:0000222!3.07e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.12e-13;32!CL:0000192;8.22e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.92e-14,32;CL:0000192,3.20e-10,43;CL:0000514,3.20e-10,43;CL:0000187,6.45e-10,55;CL:0000680,1.09e-08,58;CL:0000056,1.09e-08,58;CL:0000355,1.09e-08,58;CL:0000393,4.96e-08,61;CL:0000211,4.96e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;8.22e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.44e-16!118;UBERON:0001637!3.82e-13!42;UBERON:0003509!3.82e-13!42;UBERON:0004572!3.82e-13!42;UBERON:0004573!1.10e-12!33;UBERON:0004571!1.10e-12!33;UBERON:0000490!1.05e-11!138;UBERON:0004872!2.04e-11!84;UBERON:0000926!3.28e-11!448;UBERON:0004120!3.28e-11!448;UBERON:0006603!3.28e-11!448;UBERON:0001981!2.64e-10!60;UBERON:0007500!2.64e-10!60;UBERON:0004537!2.64e-10!60;UBERON:0006965!2.64e-10!60;UBERON:0002385!1.08e-09!63;UBERON:0001015!1.08e-09!63;UBERON:0000383!1.08e-09!63;UBERON:0001009!1.53e-09!113;UBERON:0005256!2.12e-09!143;UBERON:0001134!2.46e-09!61;UBERON:0002036!2.46e-09!61;UBERON:0003082!2.46e-09!61;UBERON:0000055!3.10e-09!69;UBERON:0004111!6.48e-09!241;UBERON:0002100!6.59e-09!216;UBERON:0004535!6.97e-09!110;UBERON:0002049!8.22e-09!79;UBERON:0007798!8.22e-09!79;UBERON:0000468!2.83e-07!659;UBERON:0000467!3.09e-07!625;UBERON:0000480!4.80e-07!626;UBERON:0003064!6.37e-07!37;UBERON:0003104!7.56e-07!238;UBERON:0009142!7.56e-07!238 | |ontology_enrichment_uberon=UBERON:0003914!2.44e-16!118;UBERON:0001637!3.82e-13!42;UBERON:0003509!3.82e-13!42;UBERON:0004572!3.82e-13!42;UBERON:0004573!1.10e-12!33;UBERON:0004571!1.10e-12!33;UBERON:0000490!1.05e-11!138;UBERON:0004872!2.04e-11!84;UBERON:0000926!3.28e-11!448;UBERON:0004120!3.28e-11!448;UBERON:0006603!3.28e-11!448;UBERON:0001981!2.64e-10!60;UBERON:0007500!2.64e-10!60;UBERON:0004537!2.64e-10!60;UBERON:0006965!2.64e-10!60;UBERON:0002385!1.08e-09!63;UBERON:0001015!1.08e-09!63;UBERON:0000383!1.08e-09!63;UBERON:0001009!1.53e-09!113;UBERON:0005256!2.12e-09!143;UBERON:0001134!2.46e-09!61;UBERON:0002036!2.46e-09!61;UBERON:0003082!2.46e-09!61;UBERON:0000055!3.10e-09!69;UBERON:0004111!6.48e-09!241;UBERON:0002100!6.59e-09!216;UBERON:0004535!6.97e-09!110;UBERON:0002049!8.22e-09!79;UBERON:0007798!8.22e-09!79;UBERON:0000468!2.83e-07!659;UBERON:0000467!3.09e-07!625;UBERON:0000480!4.80e-07!626;UBERON:0003064!6.37e-07!37;UBERON:0003104!7.56e-07!238;UBERON:0009142!7.56e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.35e-11;33!UBERON:0004571;2.35e-11;33!UBERON:0001637;5.17e-09;42!UBERON:0003509;5.17e-09;42!UBERON:0004572;5.17e-09;42 | |||
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| ||
|short_description=p@chr1:12679100..12679121,- | |short_description=p@chr1:12679100..12679121,- | ||
}} | }} |
Latest revision as of 20:31, 27 July 2015
Short description: | p@chr1:12679100..12679121, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12679100..12679121, - |
Coexpression cluster: | C3854_anaplastic_Cardiac_Mesothelial_mesothelioma_mesenchymal_Smooth_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.92e-14 | 32 |
smooth muscle cell | 3.20e-10 | 43 |
smooth muscle myoblast | 3.20e-10 | 43 |
muscle cell | 6.45e-10 | 55 |
muscle precursor cell | 1.09e-08 | 58 |
myoblast | 1.09e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-08 | 58 |
electrically responsive cell | 4.96e-08 | 61 |
electrically active cell | 4.96e-08 | 61 |