FFCP PHASE1:Hg19::chr1:9299895..9299913,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9563 | |EntrezGene=9563 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4795 | |HGNC=4795 | ||
|TSSclassifier=strong | |||
|UniProt=O95479 | |UniProt=O95479 | ||
|association_with_transcript=0bp_to_CR749282_5end | |association_with_transcript=0bp_to_CR749282_5end | ||
|cluster_id=chr1:9299895..9299913,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_H6PD_5end | |description=CAGE_peak_2_at_H6PD_5end | ||
|id=chr1:9299895..9299913,+ | |id=chr1:9299895..9299913,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.09e-07;55!CL:0000990;2.26e-07;8!CL:0000723;2.39e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.93e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.33e-07!14 | |ontology_enrichment_disease=DOID:2394!8.33e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.85e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.15e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002107!6.95e-08!19;UBERON:0006925!6.95e-08!19;UBERON:0008836!6.95e-08!19;UBERON:0005057!1.44e-07!26;UBERON:0002530!7.82e-07!59 | |ontology_enrichment_uberon=UBERON:0002107!6.95e-08!19;UBERON:0006925!6.95e-08!19;UBERON:0008836!6.95e-08!19;UBERON:0005057!1.44e-07!26;UBERON:0002530!7.82e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.24e-10;19!UBERON:0006925;6.24e-10;19!UBERON:0002365;1.35e-08;31!UBERON:0002330;1.35e-08;31!UBERON:0002368;3.23e-08;33!UBERON:0002423;7.23e-07;25!UBERON:0002119;8.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.84e-10,19;UBERON:0006925,5.84e-10,19;UBERON:0008836,5.84e-10,19;UBERON:0009854,3.47e-09,23;UBERON:0002365,9.49e-09,31;UBERON:0002330,9.49e-09,31;UBERON:0008835,3.31e-08,22;UBERON:0003894,3.31e-08,22;UBERON:0009856,9.20e-08,26;UBERON:0002368,1.31e-07,35;UBERON:0002530,2.11e-07,59;UBERON:0002119,5.66e-07,4;UBERON:0005256,6.17e-07,122;UBERON:0007499,6.89e-07,25;UBERON:0009497,6.89e-07,25;UBERON:0000015,6.89e-07,25;UBERON:0002423,6.89e-07,25;UBERON:0006235,6.89e-07,25;UBERON:0004161,6.89e-07,25 | |||
|phase1_expression=1.09007027562334,1.71280419112787,1.40954404095971,1.0007329835313,0.893922188854576,0,2.53299878168311,3.79031924056099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0.398927315243264,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.722878304769133,0.50133791063589,1.01392563272577,0,0,0.472674085820339,1.10864698731282,0.790513071238134,0.589405839739707,0,0,57.444888676879,68.6071164959113,47.4659919052349,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0.337834441449967,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.933633106199299,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0.61246251376468,0.61417158655884,1.75653827998801,0,1.48360157567134,5.46096817162816,16.5282172617735,0,0.125118519871964,0,0.438977620880838,0.30648779579902,2.70428506031874,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.828147600278907,0.674338760312407,0.241011029883482,0.441175890929576,0.435758888184812,0.71181185733329,0.269662616320329,0.392442930250692,0.769494313892781,0,1.40241773803446,3.2925920906512,2.94017422771084,152.106041786197,141.527119201578,115.794821709555,0,3.32068784066407,1.71567810298526,0,0,0,0,0,1.03993478527958,0,0,1.6437217193015,0.144366447761074,0,0.380508304469197,0,0,0.492434012174795,9.82817913584798,2.52672975890838,0,0,0,0,0,0,0.492663237895943,0.704387472105808,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.95339771567235,1.42198887333556,3.57656445851882,3.381211010224,1.06375246633948,1.04007436911366,1.28603687131071,1.41849132023278,4.52917704327369,8.43570162583071,16.8212697671347,0.823240336780769,3.58309802723109,7.46323092359346,1.58390374586686,0.904318131178758,1.74306691720059,0.599837947092342,0,0,2.10833939483032,0,0,0,0.579125226670317,6.36976599906189,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,1.65932251687533,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0.160853921143607,0,2.31314540703983,2.84098760501003,1.14978018419333,0.519254429183621,0.813472649219715,0.966875596732978,0,0,1.03333003348146,2.1850940160806,1.70461739447251,0,0,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0.256450125116389,0.984043937099117,0.976135183992909,19.3717101897718,0,0,0,0,3.21367859688319,0.096670718292122,1.84858340537573,0.767518373630648,0.689182862422653,1.39646318328756,1.74020032697074,2.13066568540252,0.534192213880424,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0.372158369359667,0.632758849437452,1.14378116354295,0.255897791311334,0,0.318203247925937,0,1.2591072030832,0.274537029736055,0.824686816419805,0,0,0,0.975267478179181,0,0,0.9554993798559,0.848432591722276,0,0,0,0,1.73632660280006,0.655894752046633,0,1.54911749049875,0,1.00387946542836,1.08073945114433,0,1.06428319221179,4.64436797654861,1.64647446479951,2.65631221636001,3.49934720244983,0,0,0,21.0882113739985,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0.921722292925374,0,0.500547425135725,0.19538809540204,0.556812347790485,0,0,0,0,0,2.3441308683503,0,0.222886768554957,0,0,0,0,0,0,0.222617410045812,0.494411622680279,0,1.19548792950642,1.93398740871803,0,0.102268682502155,0,0,0,0,0,1.57829449019094,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,4.79329239483557,0,0.538651809526579,0.341826167541004,0,0,0,1.27600463892768,0.824378340616761,1.5991043280559,0,0.156980256395025,0,0,0,0,0,2.38404868470568,0,0,0,0,0,0.707660516026713,0,0,0,0.313265848516366,0.134802265961354,0,0,0,0,0,2.36750641709634,0,0,3.1593289814244,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0.171986032471617,0.0967563312890851,0,0,0.387956065953678,0,0.90392296312213,0.822251547880505,0,0,0,0,0.640358984218058,0,0,0,0.171594997861965,0.288109595976299,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0.429226048136571,1.11585728720936,0.134366944973453,0,0,0.86661500537946,0.576911008668165,0.876246070104404,0,0,0,0,0,0,0,0.2249738915515,0,0,0,1.89133697518076,0.786818822024972,0,0,0,0,0,0,2.17199840701485,0,0.653174720218818,0,0,2.72620834856675,0.226624183040251,153.000531959918,33.1267222280553,0.129282956361551,0.52893040697076,0,0,0.854299300541557,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0,1.83807346058077,1.31149052283922,0,0,0,0,2.29363678276028,0.221858103073705,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.467426619694449,2.77402930751307,0.378806010550178,0.251567901752575,0.889811221596536,0,0,0,0,2.07085797312813,1.79921244865442,3.57104800815397,1.65882483136342,2.12673371646396,2.08698024724694,0,1.14241563650639,0.813741466409323,4.72806513926655,0.751873899297419,0.464033759878494,7.16572599657509,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0.617602894321944,0,0,0,0.337884881306145,0,0,0.303859956177382,0.138258436151731,2.72804432375144,3.98594520940089,7.68757353002468,0,0.245772908753719,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6130694312156,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,15.3512174720011,0.992422356778588,0,0,1.07140367175657,1.3451348888753,0.606965604236632,1.13831095675649,0.887023701626388,0,2.40083213212386,0,0,0,0,0.706437835654626,0,0.280272163313789,0,1.94334832096759,0,0.857718530119876,0,0.697448552208751,0,0.801711364730253,0,0.17071847709395,0,7.744092458765,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,1.29485767437579,3.38787262625615,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0,0.594092800654172,0,0.679708458751268,1.4097587696978,2.44939974299593,0,0,0,0,0,4.12856355064087,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,2.04602485189246,0.803892390468535,0,0,1.27940389140589,0,0.452122368852043,0.248298857183432,0,1.01835453245064,0,1.52401723527873,0.684466602170562,2.28996980249598,5.66605422602143,0.99798106963804,0.0814032686109745,0,1.9307228228694,0,0,0.488965776731466,0,5.3260541934841,0.805095174364105,0 | |phase1_expression=1.09007027562334,1.71280419112787,1.40954404095971,1.0007329835313,0.893922188854576,0,2.53299878168311,3.79031924056099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0.398927315243264,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.722878304769133,0.50133791063589,1.01392563272577,0,0,0.472674085820339,1.10864698731282,0.790513071238134,0.589405839739707,0,0,57.444888676879,68.6071164959113,47.4659919052349,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0.337834441449967,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.933633106199299,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0.61246251376468,0.61417158655884,1.75653827998801,0,1.48360157567134,5.46096817162816,16.5282172617735,0,0.125118519871964,0,0.438977620880838,0.30648779579902,2.70428506031874,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.828147600278907,0.674338760312407,0.241011029883482,0.441175890929576,0.435758888184812,0.71181185733329,0.269662616320329,0.392442930250692,0.769494313892781,0,1.40241773803446,3.2925920906512,2.94017422771084,152.106041786197,141.527119201578,115.794821709555,0,3.32068784066407,1.71567810298526,0,0,0,0,0,1.03993478527958,0,0,1.6437217193015,0.144366447761074,0,0.380508304469197,0,0,0.492434012174795,9.82817913584798,2.52672975890838,0,0,0,0,0,0,0.492663237895943,0.704387472105808,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.95339771567235,1.42198887333556,3.57656445851882,3.381211010224,1.06375246633948,1.04007436911366,1.28603687131071,1.41849132023278,4.52917704327369,8.43570162583071,16.8212697671347,0.823240336780769,3.58309802723109,7.46323092359346,1.58390374586686,0.904318131178758,1.74306691720059,0.599837947092342,0,0,2.10833939483032,0,0,0,0.579125226670317,6.36976599906189,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,1.65932251687533,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0.160853921143607,0,2.31314540703983,2.84098760501003,1.14978018419333,0.519254429183621,0.813472649219715,0.966875596732978,0,0,1.03333003348146,2.1850940160806,1.70461739447251,0,0,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0.256450125116389,0.984043937099117,0.976135183992909,19.3717101897718,0,0,0,0,3.21367859688319,0.096670718292122,1.84858340537573,0.767518373630648,0.689182862422653,1.39646318328756,1.74020032697074,2.13066568540252,0.534192213880424,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0.372158369359667,0.632758849437452,1.14378116354295,0.255897791311334,0,0.318203247925937,0,1.2591072030832,0.274537029736055,0.824686816419805,0,0,0,0.975267478179181,0,0,0.9554993798559,0.848432591722276,0,0,0,0,1.73632660280006,0.655894752046633,0,1.54911749049875,0,1.00387946542836,1.08073945114433,0,1.06428319221179,4.64436797654861,1.64647446479951,2.65631221636001,3.49934720244983,0,0,0,21.0882113739985,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0.921722292925374,0,0.500547425135725,0.19538809540204,0.556812347790485,0,0,0,0,0,2.3441308683503,0,0.222886768554957,0,0,0,0,0,0,0.222617410045812,0.494411622680279,0,1.19548792950642,1.93398740871803,0,0.102268682502155,0,0,0,0,0,1.57829449019094,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,4.79329239483557,0,0.538651809526579,0.341826167541004,0,0,0,1.27600463892768,0.824378340616761,1.5991043280559,0,0.156980256395025,0,0,0,0,0,2.38404868470568,0,0,0,0,0,0.707660516026713,0,0,0,0.313265848516366,0.134802265961354,0,0,0,0,0,2.36750641709634,0,0,3.1593289814244,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0.171986032471617,0.0967563312890851,0,0,0.387956065953678,0,0.90392296312213,0.822251547880505,0,0,0,0,0.640358984218058,0,0,0,0.171594997861965,0.288109595976299,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0.429226048136571,1.11585728720936,0.134366944973453,0,0,0.86661500537946,0.576911008668165,0.876246070104404,0,0,0,0,0,0,0,0.2249738915515,0,0,0,1.89133697518076,0.786818822024972,0,0,0,0,0,0,2.17199840701485,0,0.653174720218818,0,0,2.72620834856675,0.226624183040251,153.000531959918,33.1267222280553,0.129282956361551,0.52893040697076,0,0,0.854299300541557,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0,1.83807346058077,1.31149052283922,0,0,0,0,2.29363678276028,0.221858103073705,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.467426619694449,2.77402930751307,0.378806010550178,0.251567901752575,0.889811221596536,0,0,0,0,2.07085797312813,1.79921244865442,3.57104800815397,1.65882483136342,2.12673371646396,2.08698024724694,0,1.14241563650639,0.813741466409323,4.72806513926655,0.751873899297419,0.464033759878494,7.16572599657509,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0.617602894321944,0,0,0,0.337884881306145,0,0,0.303859956177382,0.138258436151731,2.72804432375144,3.98594520940089,7.68757353002468,0,0.245772908753719,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6130694312156,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,15.3512174720011,0.992422356778588,0,0,1.07140367175657,1.3451348888753,0.606965604236632,1.13831095675649,0.887023701626388,0,2.40083213212386,0,0,0,0,0.706437835654626,0,0.280272163313789,0,1.94334832096759,0,0.857718530119876,0,0.697448552208751,0,0.801711364730253,0,0.17071847709395,0,7.744092458765,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,1.29485767437579,3.38787262625615,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0,0.594092800654172,0,0.679708458751268,1.4097587696978,2.44939974299593,0,0,0,0,0,4.12856355064087,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,2.04602485189246,0.803892390468535,0,0,1.27940389140589,0,0.452122368852043,0.248298857183432,0,1.01835453245064,0,1.52401723527873,0.684466602170562,2.28996980249598,5.66605422602143,0.99798106963804,0.0814032686109745,0,1.9307228228694,0,0,0.488965776731466,0,5.3260541934841,0.805095174364105,0 | ||
|short_description=p2@H6PD | |short_description=p2@H6PD | ||
}} | }} |
Latest revision as of 20:39, 19 September 2015
Short description: | p2@H6PD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_H6PD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_CR749282_5end |
EntrezGene: | H6PD |
HGNC: | 4795 |
UniProt: | O95479 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.93e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
liver | 5.84e-10 | 19 |
digestive gland | 5.84e-10 | 19 |
liver bud | 5.84e-10 | 19 |
digestive tract diverticulum | 3.47e-09 | 23 |
exocrine gland | 9.49e-09 | 31 |
exocrine system | 9.49e-09 | 31 |
hepatic diverticulum | 3.31e-08 | 22 |
liver primordium | 3.31e-08 | 22 |
sac | 9.20e-08 | 26 |
endocrine gland | 1.31e-07 | 35 |
gland | 2.11e-07 | 59 |
left ovary | 5.66e-07 | 4 |
trunk mesenchyme | 6.17e-07 | 122 |
epithelial sac | 6.89e-07 | 25 |
epithelium of foregut-midgut junction | 6.89e-07 | 25 |
anatomical boundary | 6.89e-07 | 25 |
hepatobiliary system | 6.89e-07 | 25 |
foregut-midgut junction | 6.89e-07 | 25 |
septum transversum | 6.89e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.15e-08 | 14 |