FFCP PHASE1:Hg19::chr3:112359550..112359569,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=333bp_to_ENST00000475181_5end | |association_with_transcript=333bp_to_ENST00000475181_5end | ||
|cluster_id=chr3:112359550..112359569,- | |||
|coexpression_cluster_id=C333 | |coexpression_cluster_id=C333 | ||
|description=CAGE_peak_7_at_CCDC80_5end | |description=CAGE_peak_7_at_CCDC80_5end | ||
|id=chr3:112359550..112359569,- | |id=chr3:112359550..112359569,- | ||
|ontology_enrichment_celltype=CL:0000055!1.51e-25!180;CL:0000680!3.68e-17!57;CL:0000056!3.68e-17!57;CL:0000355!3.68e-17!57;CL:0000187!5.90e-16!54;CL:0000359!6.70e-15!32;CL:0000192!1.19e-14!42;CL:0000514!1.19e-14!42;CL:0000057!1.80e-14!75;CL:0000183!1.37e-13!59;CL:0000393!2.91e-13!60;CL:0000211!2.91e-13!60;CL:0002494!2.11e-11!16;CL:0000222!3.65e-10!119;CL:0000136!1.04e-07!15;CL:0002334!1.77e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.51e-25!180;CL:0000680!3.68e-17!57;CL:0000056!3.68e-17!57;CL:0000355!3.68e-17!57;CL:0000187!5.90e-16!54;CL:0000359!6.70e-15!32;CL:0000192!1.19e-14!42;CL:0000514!1.19e-14!42;CL:0000057!1.80e-14!75;CL:0000183!1.37e-13!59;CL:0000393!2.91e-13!60;CL:0000211!2.91e-13!60;CL:0002494!2.11e-11!16;CL:0000222!3.65e-10!119;CL:0000136!1.04e-07!15;CL:0002334!1.77e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002494;6.20e-16;16!CL:0000359;9.41e-15;32!CL:0000192;4.51e-11;43!CL:0000136;1.73e-09;13!CL:0002334;3.55e-09;12!CL:0000187;2.58e-07;55!CL:0000393;4.95e-07;61!CL:0000211;4.95e-07;61!CL:0002548;7.45e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.10e-16,32;CL:0002494,5.07e-16,16;CL:0000680,7.37e-16,58;CL:0000056,7.37e-16,58;CL:0000355,7.37e-16,58;CL:0000057,1.37e-15,76;CL:0000192,3.18e-15,43;CL:0000514,3.18e-15,43;CL:0000187,2.78e-14,55;CL:0000048,3.68e-12,427;CL:0000393,8.32e-12,61;CL:0000211,8.32e-12,61;CL:0000723,1.69e-11,433;CL:0000136,6.25e-11,15;CL:0000034,1.18e-10,441;CL:0002334,3.13e-09,12;CL:0000222,6.54e-09,121;CL:0002548,6.96e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;4.51e-11;43!CL:0000355;2.59e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!2.67e-07!14 | |ontology_enrichment_disease=DOID:2394!2.67e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.40e-22!84;UBERON:0002385!9.15e-18!63;UBERON:0001015!9.15e-18!63;UBERON:0000383!9.15e-18!63;UBERON:0007100!1.15e-17!27;UBERON:0001134!2.17e-17!61;UBERON:0002036!2.17e-17!61;UBERON:0003082!2.17e-17!61;UBERON:0000948!9.19e-17!24;UBERON:0005498!9.19e-17!24;UBERON:0004140!9.19e-17!24;UBERON:0009881!9.19e-17!24;UBERON:0004141!9.19e-17!24;UBERON:0003084!9.19e-17!24;UBERON:0007005!9.19e-17!24;UBERON:0004139!9.19e-17!24;UBERON:0004291!9.19e-17!24;UBERON:0001009!2.20e-16!113;UBERON:0004290!3.35e-16!70;UBERON:0004535!2.00e-15!110;UBERON:0002049!4.72e-14!79;UBERON:0007798!4.72e-14!79;UBERON:0000914!5.68e-14!83;UBERON:0002329!5.68e-14!83;UBERON:0003077!5.68e-14!83;UBERON:0003059!5.68e-14!83;UBERON:0007282!5.68e-14!83;UBERON:0009618!5.68e-14!83;UBERON:0007285!5.68e-14!83;UBERON:0000486!1.74e-13!82;UBERON:0003914!6.94e-13!118;UBERON:0001981!1.21e-12!60;UBERON:0007500!1.21e-12!60;UBERON:0004537!1.21e-12!60;UBERON:0006965!1.21e-12!60;UBERON:0000055!2.19e-12!69;UBERON:0001637!1.43e-11!42;UBERON:0003509!1.43e-11!42;UBERON:0004572!1.43e-11!42;UBERON:0000490!1.08e-10!138;UBERON:0005256!1.92e-10!143;UBERON:0004573!7.51e-10!33;UBERON:0004571!7.51e-10!33;UBERON:0002100!2.57e-07!216;UBERON:0000119!3.03e-07!312;UBERON:0000483!7.16e-07!309;UBERON:0004923!7.81e-07!57 | |ontology_enrichment_uberon=UBERON:0004872!6.40e-22!84;UBERON:0002385!9.15e-18!63;UBERON:0001015!9.15e-18!63;UBERON:0000383!9.15e-18!63;UBERON:0007100!1.15e-17!27;UBERON:0001134!2.17e-17!61;UBERON:0002036!2.17e-17!61;UBERON:0003082!2.17e-17!61;UBERON:0000948!9.19e-17!24;UBERON:0005498!9.19e-17!24;UBERON:0004140!9.19e-17!24;UBERON:0009881!9.19e-17!24;UBERON:0004141!9.19e-17!24;UBERON:0003084!9.19e-17!24;UBERON:0007005!9.19e-17!24;UBERON:0004139!9.19e-17!24;UBERON:0004291!9.19e-17!24;UBERON:0001009!2.20e-16!113;UBERON:0004290!3.35e-16!70;UBERON:0004535!2.00e-15!110;UBERON:0002049!4.72e-14!79;UBERON:0007798!4.72e-14!79;UBERON:0000914!5.68e-14!83;UBERON:0002329!5.68e-14!83;UBERON:0003077!5.68e-14!83;UBERON:0003059!5.68e-14!83;UBERON:0007282!5.68e-14!83;UBERON:0009618!5.68e-14!83;UBERON:0007285!5.68e-14!83;UBERON:0000486!1.74e-13!82;UBERON:0003914!6.94e-13!118;UBERON:0001981!1.21e-12!60;UBERON:0007500!1.21e-12!60;UBERON:0004537!1.21e-12!60;UBERON:0006965!1.21e-12!60;UBERON:0000055!2.19e-12!69;UBERON:0001637!1.43e-11!42;UBERON:0003509!1.43e-11!42;UBERON:0004572!1.43e-11!42;UBERON:0000490!1.08e-10!138;UBERON:0005256!1.92e-10!143;UBERON:0004573!7.51e-10!33;UBERON:0004571!7.51e-10!33;UBERON:0002100!2.57e-07!216;UBERON:0000119!3.03e-07!312;UBERON:0000483!7.16e-07!309;UBERON:0004923!7.81e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.03e-21;25!UBERON:0000948;1.10e-21;22!UBERON:0001637;3.11e-09;42!UBERON:0003509;3.11e-09;42!UBERON:0004572;3.11e-09;42!UBERON:0004573;1.13e-08;33!UBERON:0004571;1.13e-08;33!UBERON:0003688;1.51e-08;6!UBERON:0002358;1.51e-08;6!UBERON:0003684;1.51e-08;6!UBERON:0001178;1.51e-08;6!UBERON:0004457;1.60e-08;9!UBERON:0000042;1.60e-08;9!UBERON:0007500;5.90e-07;56!UBERON:0001981;5.90e-07;56!UBERON:0004537;5.90e-07;56 | |||
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| ||
|short_description=p7@CCDC80 | |short_description=p7@CCDC80 | ||
}} | }} |
Latest revision as of 14:32, 19 September 2015
Short description: | p7@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 333bp_to_ENST00000475181_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.10e-16 | 32 |
cardiocyte | 5.07e-16 | 16 |
muscle precursor cell | 7.37e-16 | 58 |
myoblast | 7.37e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.37e-16 | 58 |
fibroblast | 1.37e-15 | 76 |
smooth muscle cell | 3.18e-15 | 43 |
smooth muscle myoblast | 3.18e-15 | 43 |
muscle cell | 2.78e-14 | 55 |
multi fate stem cell | 3.68e-12 | 427 |
electrically responsive cell | 8.32e-12 | 61 |
electrically active cell | 8.32e-12 | 61 |
somatic stem cell | 1.69e-11 | 433 |
fat cell | 6.25e-11 | 15 |
stem cell | 1.18e-10 | 441 |
preadipocyte | 3.13e-09 | 12 |
mesodermal cell | 6.54e-09 | 121 |
cardiac fibroblast | 6.96e-07 | 6 |