FFCP PHASE1:Hg19::chr19:36019202..36019220,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:36019202..36019220,-
|short_description=p1@SBSN
|description=CAGE_peak_1_at_SBSN_5end
|association_with_transcript=0bp_to_ENST00000452271,uc002oad.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=374897 | |EntrezGene=374897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24950 | |HGNC=24950 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBV3 | |UniProt=E9PBV3 | ||
|association_with_transcript=0bp_to_ENST00000452271,uc002oad.1_5end | |||
|cluster_id=chr19:36019202..36019220,- | |||
|coexpression_cluster_id=C1674 | |||
|description=CAGE_peak_1_at_SBSN_5end | |||
|id=chr19:36019202..36019220,- | |||
|ontology_enrichment_celltype=CL:0000055!1.11e-20!180;CL:0000057!2.62e-16!75;CL:0002371!1.32e-09!591;CL:0000680!3.51e-09!57;CL:0000056!3.51e-09!57;CL:0000355!3.51e-09!57;CL:0002620!5.54e-09!23;CL:0000144!1.08e-08!625;CL:0000187!2.44e-08!54;CL:0000723!9.56e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.66e-09;23!CL:0002570;7.42e-08;8!CL:0002159;2.79e-07;14!CL:0002334;2.84e-07;12!CL:0000154;4.41e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.22e-15,76;CL:0002620,1.87e-09,23;CL:0000723,8.84e-09,433;CL:0000034,5.96e-08,441;CL:0002570,7.31e-08,8;CL:0000048,9.03e-08,427;CL:0002334,2.36e-07,12;CL:0002159,3.07e-07,14;CL:0000680,3.15e-07,58;CL:0000056,3.15e-07,58;CL:0000355,3.15e-07,58;CL:0000154,4.40e-07,6;CL:0000187,9.09e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.37e-19!95;UBERON:0000486!9.87e-15!82;UBERON:0002199!5.16e-13!45;UBERON:0002416!5.16e-13!45;UBERON:0000914!6.11e-12!83;UBERON:0002329!6.11e-12!83;UBERON:0003077!6.11e-12!83;UBERON:0003059!6.11e-12!83;UBERON:0007282!6.11e-12!83;UBERON:0009618!6.11e-12!83;UBERON:0007285!6.11e-12!83;UBERON:0002097!1.35e-11!40;UBERON:0004290!6.01e-11!70;UBERON:0001134!8.59e-09!61;UBERON:0002036!8.59e-09!61;UBERON:0003082!8.59e-09!61;UBERON:0002385!1.82e-08!63;UBERON:0001015!1.82e-08!63;UBERON:0000383!1.82e-08!63;UBERON:0000165!4.36e-08!28;UBERON:0000930!4.36e-08!28;UBERON:0000475!1.77e-07!365;UBERON:0001013!6.62e-07!14;UBERON:0000078!9.17e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;4.81e-12;46!UBERON:0002416;4.81e-12;46!UBERON:0002097;1.20e-10;41!UBERON:0003102;1.88e-10;50!UBERON:0000165;2.37e-07;28!UBERON:0000486;6.12e-07;12!UBERON:0001013;9.66e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.69e-21,99;UBERON:0002199,3.43e-16,46;UBERON:0002416,3.43e-16,46;UBERON:0002097,3.16e-14,41;UBERON:0000486,1.11e-13,83;UBERON:0002329,3.37e-09,71;UBERON:0003059,3.37e-09,71;UBERON:0007282,3.37e-09,71;UBERON:0004290,3.37e-09,71;UBERON:0009618,3.37e-09,71;UBERON:0003077,6.61e-09,72;UBERON:0007285,6.61e-09,72;UBERON:0007524,1.27e-08,73;UBERON:0007503,8.61e-08,78;UBERON:0000165,7.04e-07,29;UBERON:0000930,7.04e-07,29;UBERON:0001013,9.58e-07,14;UBERON:0001134,9.64e-07,62;UBERON:0002036,9.64e-07,62;UBERON:0003082,9.64e-07,62 | |||
|phase1_expression=5.4503513781167,3.63970890614671,6.3429481843187,4.00293193412522,0.893922188854576,0.872338524100369,0,53.0644693678538,9.14149698699435,0.245733936501509,1.39560233594486,0.218441372130172,0,0.123766352960047,0,4.03395087871065,0.602694528023977,1.46062018077475,0.487932798790507,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,45.0516399994674,28.0121504463773,5.9160641626686,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.464858073811369,0,0,0.575384784644301,0.768482119587302,0.47296445977717,5.17118521104928,3.87290810150296,2.70852973188684,0,0,0,3.06083892370903,0.962787081228281,3.83602275479425,0,0.199463657621632,0,5.22376629531451,1.70215567407342,4.35975574296902,0.502497330513487,0,0,19.9781835869012,1.84138817993782,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,5.36560687762909,0.767175371061182,6.50590474292219,8.52274448081012,8.69079113764942,1.5905718941022,0.486634870302636,0,0.221729397462564,0.175669571386252,3.07800827419625,73.9519435233861,177.605748093742,0,0,0,0,0,0,0,4.30117297553062,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,102.918196305638,0.496971951695318,0.379891534993739,1.85372853138506,13.4813211751942,2.83734705758686,2.24271040056923,0,0.24666754841716,26.4529380089801,0.269421344139376,1.47115712802113,0,0,0.234321431833797,14.0472034573644,7.98660550162229,34.3731965269142,2.23125547423153,2.42809416552197,2.94946694074722,1.42907919878425,0,0.619954687054593,2.37600571456411,2.96720315134268,10.0117749813183,3.59309070908119,0.505008341862199,0.625592599359821,1.10825646193673,8.34057479673592,2.75839016219118,7.06118876861005,0.567160915800105,7.5343646989322,1.92201649936711,13.563641674212,16.5050102846421,6.08009922506789,2.83404594050192,0.930584281657949,9.62025093775217,1.94874010322397,6.81571190459109,4.32634523618807,2.10139873864455,7.4552014428489,1.5112814734146,2.03472710772585,54.4995605920497,48.8215555857594,7.1701148847251,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,6.03678306441573,5.0531563716871,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,4.115740113314,0,0,0,0,0,0,0.171567810298526,125.773827078285,91.0454201386718,40.2115889646523,3.79612625149971,0,0,1.44331342025273,0.115930404975077,0,0.288732895522148,0,0,0,0,0.246217006087397,0,0,12.185398418281,0.16798212819886,2.41017665312057,0.985143749731331,1.45316969256981,2.68367875415648,0,0,0,0,0,2.41291998310242,0,0,0,0.205654985406647,0.600686115687835,0,1.00917975910825,0,1.9067954313447,0.646358578788889,89.4141114629706,21.1325688139,0.26593811658487,2.08014873822732,1.28603687131071,0,1.0656887160644,1.85871391755592,0.542621605391443,0.823240336780769,13.6809197403369,0.710783897485092,0,2.41151501647669,0,1.59956785891291,0,0,0,0.239624855491583,0,0,2.31650090668127,11.0957214177207,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,2.28767947683888,0.356857977594324,0.630809660135739,0.234282829985426,4.8151375956435,9.09630016223939,4.1389228517002,1.32845119707087,1.84369168541703,7.55887445872321,0,0,0,0,0,0.303127571446259,0,2.11673205330776,3.47350930946288,1.84154367945675,4.2099014164961,23.0650468660262,1.53512174720011,1.44768529029247,1.48418066444991,4.62629081407967,16.6908021794339,7.88420697732568,5.19254429183621,10.4589340613963,0,0,107.734757054999,0.803701137152247,1.63882051206045,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33385162651306,0,0,0,0,0,68.9118645595407,204.768977501504,9.64103579064957,0.193341436584244,24.8018273554577,20.5694924133014,4.9621166094431,22.0211501979961,18.8521702088497,11.5908213285897,0.445160178233687,8.59481559877086,6.3422722230485,11.4851441245126,22.0523962265099,1.85938219718914,11.6480568327337,0,2.15623506123262,3.19383618190213,0,1.11194531462352,0.858749320451947,0.372158369359667,0.316379424718726,2.09693213316207,4.60616024360401,5.56320684444097,13.6827396608153,0,1.07923474549989,1.37268514868027,1.41374882814824,3.03273722359974,0,9.26768603725758,0,1.70599442741899,1.05650146756755,1.77449884830381,1.1312434556297,28.2520291550607,3.30819206127675,0.66343897524122,0.876901770507525,6.36653087693356,1.31178950409327,0,2.478587984798,0,0.143411352204052,0,0,5.32141596105897,119.909136849073,77.7135947385368,0,0.349934720244983,10.2957660616298,7.37332503089366,5.44454924306613,0.0941438007767792,2.58303223602738,57.2803017269927,141.010788824663,5.97280840538095,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.71623345421307,0,3.37876772309155,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0.20453736500431,0,1.24415835064723,0.179736702294654,0,0,1.57829449019094,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,3.49729672013683,0,0,0,0,0,45.1732931462675,448.389156301626,0.227884111694002,0,0.269272933229316,0,3.19001159731919,0,0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| ||
|short_description=p1@SBSN | |||
}} | }} |
Latest revision as of 12:24, 17 September 2015
Short description: | p1@SBSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SBSN_5end |
Coexpression cluster: | C1674_tongue_salivary_pagetoid_uterus_cervix_esophagus_skin |
Association with transcript: | 0bp_to_ENST00000452271, uc002oad.1_5end |
EntrezGene: | SBSN |
HGNC: | 24950 |
UniProt: | E9PBV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.22e-15 | 76 |
skin fibroblast | 1.87e-09 | 23 |
somatic stem cell | 8.84e-09 | 433 |
stem cell | 5.96e-08 | 441 |
mesenchymal stem cell of adipose | 7.31e-08 | 8 |
multi fate stem cell | 9.03e-08 | 427 |
preadipocyte | 2.36e-07 | 12 |
general ecto-epithelial cell | 3.07e-07 | 14 |
muscle precursor cell | 3.15e-07 | 58 |
myoblast | 3.15e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.15e-07 | 58 |
protein secreting cell | 4.40e-07 | 6 |
muscle cell | 9.09e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.69e-21 | 99 |
integument | 3.43e-16 | 46 |
integumental system | 3.43e-16 | 46 |
skin of body | 3.16e-14 | 41 |
multilaminar epithelium | 1.11e-13 | 83 |
somite | 3.37e-09 | 71 |
presomitic mesoderm | 3.37e-09 | 71 |
presumptive segmental plate | 3.37e-09 | 71 |
dermomyotome | 3.37e-09 | 71 |
trunk paraxial mesoderm | 3.37e-09 | 71 |
paraxial mesoderm | 6.61e-09 | 72 |
presumptive paraxial mesoderm | 6.61e-09 | 72 |
dense mesenchyme tissue | 1.27e-08 | 73 |
epithelial vesicle | 8.61e-08 | 78 |
mouth | 7.04e-07 | 29 |
stomodeum | 7.04e-07 | 29 |
adipose tissue | 9.58e-07 | 14 |
skeletal muscle tissue | 9.64e-07 | 62 |
striated muscle tissue | 9.64e-07 | 62 |
myotome | 9.64e-07 | 62 |