FFCP PHASE1:Hg19::chr6:149806066..149806087,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340152 | |EntrezGene=340152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21175 | |HGNC=21175 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_uc003qmm.2,uc010kid.2_5end | |association_with_transcript=-36bp_to_uc003qmm.2,uc010kid.2_5end | ||
|cluster_id=chr6:149806066..149806087,- | |||
|coexpression_cluster_id=C901 | |coexpression_cluster_id=C901 | ||
|description=CAGE_peak_4_at_ZC3H12D_5end | |description=CAGE_peak_4_at_ZC3H12D_5end | ||
|id=chr6:149806066..149806087,- | |id=chr6:149806066..149806087,- | ||
|ontology_enrichment_celltype=CL:0000738!4.67e-63!140;CL:0000037!4.80e-62!172;CL:0000566!4.80e-62!172;CL:0002032!3.99e-60!165;CL:0000837!3.99e-60!165;CL:0000988!4.28e-60!182;CL:0002087!6.96e-58!119;CL:0002031!1.15e-55!124;CL:0000542!1.03e-44!53;CL:0000051!1.03e-44!53;CL:0000838!5.85e-44!52;CL:0000945!8.14e-22!24;CL:0000826!8.14e-22!24;CL:0000791!4.72e-21!18;CL:0000789!4.72e-21!18;CL:0002420!4.72e-21!18;CL:0002419!4.72e-21!18;CL:0000790!4.72e-21!18;CL:0000763!2.93e-20!112;CL:0000049!2.93e-20!112;CL:0000084!1.53e-19!25;CL:0000827!1.53e-19!25;CL:0000557!1.92e-17!71;CL:0000134!1.79e-16!358;CL:0002009!4.82e-16!65;CL:0002320!5.85e-16!365;CL:0000766!6.91e-16!76;CL:0000236!1.35e-15!14;CL:0002194!2.40e-14!63;CL:0000576!2.40e-14!63;CL:0000040!2.40e-14!63;CL:0000559!2.40e-14!63;CL:0000839!2.68e-14!70;CL:0000625!2.98e-13!11;CL:0000219!4.46e-12!390;CL:0002057!2.64e-10!42;CL:0000860!4.10e-09!45;CL:0000624!5.04e-09!6;CL:0000048!3.09e-08!430;CL:0000990!4.29e-08!8;CL:0000723!1.02e-07!436;CL:0000451!1.14e-07!10;CL:0000034!1.88e-07!444 | |ontology_enrichment_celltype=CL:0000738!4.67e-63!140;CL:0000037!4.80e-62!172;CL:0000566!4.80e-62!172;CL:0002032!3.99e-60!165;CL:0000837!3.99e-60!165;CL:0000988!4.28e-60!182;CL:0002087!6.96e-58!119;CL:0002031!1.15e-55!124;CL:0000542!1.03e-44!53;CL:0000051!1.03e-44!53;CL:0000838!5.85e-44!52;CL:0000945!8.14e-22!24;CL:0000826!8.14e-22!24;CL:0000791!4.72e-21!18;CL:0000789!4.72e-21!18;CL:0002420!4.72e-21!18;CL:0002419!4.72e-21!18;CL:0000790!4.72e-21!18;CL:0000763!2.93e-20!112;CL:0000049!2.93e-20!112;CL:0000084!1.53e-19!25;CL:0000827!1.53e-19!25;CL:0000557!1.92e-17!71;CL:0000134!1.79e-16!358;CL:0002009!4.82e-16!65;CL:0002320!5.85e-16!365;CL:0000766!6.91e-16!76;CL:0000236!1.35e-15!14;CL:0002194!2.40e-14!63;CL:0000576!2.40e-14!63;CL:0000040!2.40e-14!63;CL:0000559!2.40e-14!63;CL:0000839!2.68e-14!70;CL:0000625!2.98e-13!11;CL:0000219!4.46e-12!390;CL:0002057!2.64e-10!42;CL:0000860!4.10e-09!45;CL:0000624!5.04e-09!6;CL:0000048!3.09e-08!430;CL:0000990!4.29e-08!8;CL:0000723!1.02e-07!436;CL:0000451!1.14e-07!10;CL:0000034!1.88e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.24e-36;53!CL:0000791;1.17e-34;18!CL:0000789;1.17e-34;18!CL:0002419;1.17e-34;18!CL:0000945;1.64e-31;24!CL:0000084;3.07e-26;25!CL:0000236;1.86e-23;13!CL:0000625;2.84e-23;11!CL:0002087;3.10e-16;104!CL:0000624;2.23e-15;6!CL:0000738;8.29e-10;136!CL:0000898;1.89e-08;3!CL:0000623;5.50e-08;3!CL:0000226;4.35e-07;3!CL:0000842;4.35e-07;3!CL:0002619;7.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.65e-63,52;CL:0000542,9.89e-62,53;CL:0000051,9.89e-62,53;CL:0002087,6.18e-51,115;CL:0002031,1.10e-46,120;CL:0000738,2.76e-46,136;CL:0000037,4.77e-37,168;CL:0002032,7.72e-35,161;CL:0000837,7.72e-35,161;CL:0000791,1.35e-34,18;CL:0000789,1.35e-34,18;CL:0002420,1.35e-34,18;CL:0002419,1.35e-34,18;CL:0000790,1.35e-34,18;CL:0000988,2.67e-34,177;CL:0000945,1.99e-31,24;CL:0000826,1.99e-31,24;CL:0000084,3.66e-26,25;CL:0000827,3.66e-26,25;CL:0000625,3.27e-23,11;CL:0000236,1.48e-21,14;CL:0000624,2.24e-15,6;CL:0000134,1.27e-09,354;CL:0002320,3.85e-09,361;CL:0000898,1.90e-08,3;CL:0000623,5.45e-08,3;CL:0000825,5.45e-08,3;CL:0000219,1.80e-07,386;CL:0000226,5.23e-07,3;CL:0000842,5.23e-07,3;CL:0002619,6.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;3.24e-36;53!CL:0000790;1.17e-34;18 | |||
|ontology_enrichment_disease=DOID:2531!3.91e-08!51;DOID:0060083!3.91e-08!51 | |ontology_enrichment_disease=DOID:2531!3.91e-08!51;DOID:0060083!3.91e-08!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.56e-27!102;UBERON:0003061!2.56e-27!102;UBERON:0002193!2.73e-25!112;UBERON:0002384!4.41e-15!375;UBERON:0002371!1.03e-14!80;UBERON:0002405!8.83e-14!115;UBERON:0001474!1.80e-13!86;UBERON:0000178!7.40e-11!15;UBERON:0000179!7.40e-11!15;UBERON:0000463!7.40e-11!15;UBERON:0004765!1.50e-09!101;UBERON:0001434!1.50e-09!101 | |ontology_enrichment_uberon=UBERON:0002390!2.56e-27!102;UBERON:0003061!2.56e-27!102;UBERON:0002193!2.73e-25!112;UBERON:0002384!4.41e-15!375;UBERON:0002371!1.03e-14!80;UBERON:0002405!8.83e-14!115;UBERON:0001474!1.80e-13!86;UBERON:0000178!7.40e-11!15;UBERON:0000179!7.40e-11!15;UBERON:0000463!7.40e-11!15;UBERON:0004765!1.50e-09!101;UBERON:0001434!1.50e-09!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.99e-12;15!UBERON:0000179;1.99e-12;15!UBERON:0000463;1.99e-12;15!UBERON:0002390;5.17e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.73e-12,15;UBERON:0000179,1.73e-12,15;UBERON:0000463,1.73e-12,15;UBERON:0002193,7.69e-12,108;UBERON:0002390,8.72e-12,98;UBERON:0003061,8.72e-12,98;UBERON:0002384,1.73e-08,371 | |||
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| ||
|short_description=p4@ZC3H12D | |short_description=p4@ZC3H12D | ||
}} | }} |
Latest revision as of 02:23, 16 September 2015
Short description: | p4@ZC3H12D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZC3H12D_5end |
Coexpression cluster: | C901_immature_CD4_Natural_CD19_CD8_lymphoma_tonsil |
Association with transcript: | -36bp_to_uc003qmm.2, uc010kid.2_5end |
EntrezGene: | ZC3H12D |
HGNC: | 21175 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.65e-63 | 52 |
lymphocyte | 9.89e-62 | 53 |
common lymphoid progenitor | 9.89e-62 | 53 |
nongranular leukocyte | 6.18e-51 | 115 |
hematopoietic lineage restricted progenitor cell | 1.10e-46 | 120 |
leukocyte | 2.76e-46 | 136 |
hematopoietic stem cell | 4.77e-37 | 168 |
hematopoietic oligopotent progenitor cell | 7.72e-35 | 161 |
hematopoietic multipotent progenitor cell | 7.72e-35 | 161 |
mature alpha-beta T cell | 1.35e-34 | 18 |
alpha-beta T cell | 1.35e-34 | 18 |
immature T cell | 1.35e-34 | 18 |
mature T cell | 1.35e-34 | 18 |
immature alpha-beta T cell | 1.35e-34 | 18 |
hematopoietic cell | 2.67e-34 | 177 |
lymphocyte of B lineage | 1.99e-31 | 24 |
pro-B cell | 1.99e-31 | 24 |
T cell | 3.66e-26 | 25 |
pro-T cell | 3.66e-26 | 25 |
CD8-positive, alpha-beta T cell | 3.27e-23 | 11 |
B cell | 1.48e-21 | 14 |
CD4-positive, alpha-beta T cell | 2.24e-15 | 6 |
mesenchymal cell | 1.27e-09 | 354 |
connective tissue cell | 3.85e-09 | 361 |
naive T cell | 1.90e-08 | 3 |
natural killer cell | 5.45e-08 | 3 |
pro-NK cell | 5.45e-08 | 3 |
motile cell | 1.80e-07 | 386 |
single nucleate cell | 5.23e-07 | 3 |
mononuclear cell | 5.23e-07 | 3 |
adult endothelial progenitor cell | 6.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.73e-12 | 15 |
haemolymphatic fluid | 1.73e-12 | 15 |
organism substance | 1.73e-12 | 15 |
hemolymphoid system | 7.69e-12 | 108 |
hematopoietic system | 8.72e-12 | 98 |
blood island | 8.72e-12 | 98 |
connective tissue | 1.73e-08 | 371 |