FFCP PHASE1:Hg19::chr9:73480452..73480461,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80036 | |EntrezGene=80036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17992 | |HGNC=17992 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_ENST00000437699_5end | |association_with_transcript=-67bp_to_ENST00000437699_5end | ||
|cluster_id=chr9:73480452..73480461,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_16_at_TRPM3_5end | |description=CAGE_peak_16_at_TRPM3_5end | ||
|id=chr9:73480452..73480461,- | |id=chr9:73480452..73480461,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;3.58e-07;15!CL:0000125;3.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,3.58e-07,15;CL:0000125,3.58e-07,15;CL:0000030,3.58e-07,15;CL:0000339,3.58e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3!UBERON:0006238;2.37e-10;10!CL:0000339;3.58e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.33e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.33e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0001896!3.11e-27!3;UBERON:0005290!3.11e-27!3;UBERON:0010096!3.11e-27!3;UBERON:0002336!7.72e-21!1;UBERON:0001018!7.72e-21!1;UBERON:0002473!7.72e-21!1;UBERON:0005340!7.72e-21!1;UBERON:0002316!7.72e-21!1;UBERON:0003544!7.72e-21!1;UBERON:0001020!7.72e-21!1;UBERON:0005970!7.72e-21!1;UBERON:0002437!7.72e-21!1;UBERON:0001954!3.70e-11!2;UBERON:0003022!3.70e-11!2;UBERON:0002421!3.70e-11!2;UBERON:0002600!3.70e-11!2;UBERON:0005162!4.09e-11!2;UBERON:0000122!4.09e-11!2;UBERON:0003075!6.53e-11!86;UBERON:0007284!6.53e-11!86;UBERON:0002298!7.30e-11!8;UBERON:0005743!8.61e-11!86;UBERON:0002346!2.02e-10!90;UBERON:0000955!6.26e-10!69;UBERON:0006238!6.26e-10!69;UBERON:0000033!8.51e-10!123;UBERON:0000073!9.15e-10!94;UBERON:0001016!9.15e-10!94;UBERON:0000970!1.07e-09!20;UBERON:0000153!2.50e-09!129;UBERON:0007811!2.50e-09!129;UBERON:0002104!2.91e-09!21;UBERON:0001049!1.37e-08!57;UBERON:0005068!1.37e-08!57;UBERON:0006241!1.37e-08!57;UBERON:0007135!1.37e-08!57;UBERON:0000020!1.65e-08!23;UBERON:0001017!2.25e-08!82;UBERON:0002616!2.63e-08!59;UBERON:0001032!3.54e-08!24;UBERON:0004456!3.54e-08!24;UBERON:0003056!4.21e-08!61;UBERON:0004733!1.52e-07!12;UBERON:0002028!1.52e-07!12;UBERON:0007277!1.52e-07!12;UBERON:0004732!4.95e-07!13;UBERON:0004121!5.42e-07!169;UBERON:0000924!8.03e-07!173;UBERON:0006601!8.03e-07!173 | |ontology_enrichment_uberon=UBERON:0001896!3.11e-27!3;UBERON:0005290!3.11e-27!3;UBERON:0010096!3.11e-27!3;UBERON:0002336!7.72e-21!1;UBERON:0001018!7.72e-21!1;UBERON:0002473!7.72e-21!1;UBERON:0005340!7.72e-21!1;UBERON:0002316!7.72e-21!1;UBERON:0003544!7.72e-21!1;UBERON:0001020!7.72e-21!1;UBERON:0005970!7.72e-21!1;UBERON:0002437!7.72e-21!1;UBERON:0001954!3.70e-11!2;UBERON:0003022!3.70e-11!2;UBERON:0002421!3.70e-11!2;UBERON:0002600!3.70e-11!2;UBERON:0005162!4.09e-11!2;UBERON:0000122!4.09e-11!2;UBERON:0003075!6.53e-11!86;UBERON:0007284!6.53e-11!86;UBERON:0002298!7.30e-11!8;UBERON:0005743!8.61e-11!86;UBERON:0002346!2.02e-10!90;UBERON:0000955!6.26e-10!69;UBERON:0006238!6.26e-10!69;UBERON:0000033!8.51e-10!123;UBERON:0000073!9.15e-10!94;UBERON:0001016!9.15e-10!94;UBERON:0000970!1.07e-09!20;UBERON:0000153!2.50e-09!129;UBERON:0007811!2.50e-09!129;UBERON:0002104!2.91e-09!21;UBERON:0001049!1.37e-08!57;UBERON:0005068!1.37e-08!57;UBERON:0006241!1.37e-08!57;UBERON:0007135!1.37e-08!57;UBERON:0000020!1.65e-08!23;UBERON:0001017!2.25e-08!82;UBERON:0002616!2.63e-08!59;UBERON:0001032!3.54e-08!24;UBERON:0004456!3.54e-08!24;UBERON:0003056!4.21e-08!61;UBERON:0004733!1.52e-07!12;UBERON:0002028!1.52e-07!12;UBERON:0007277!1.52e-07!12;UBERON:0004732!4.95e-07!13;UBERON:0004121!5.42e-07!169;UBERON:0000924!8.03e-07!173;UBERON:0006601!8.03e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6 | |||
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|short_description=p16@TRPM3 | |short_description=p16@TRPM3 | ||
}} | }} |
Latest revision as of 18:43, 17 September 2015
Short description: | p16@TRPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TRPM3_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -67bp_to_ENST00000437699_5end |
EntrezGene: | TRPM3 |
HGNC: | 17992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 3.58e-07 | 15 |
glial cell | 3.58e-07 | 15 |
glioblast | 3.58e-07 | 15 |
glioblast (sensu Vertebrata) | 3.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.33e-09 | 11 |