FFCP PHASE1:Hg19::chr9:95726506..95726519,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89846 | |EntrezGene=89846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16027 | |HGNC=16027 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=118bp_to_ENST00000468206_5end | |association_with_transcript=118bp_to_ENST00000468206_5end | ||
|cluster_id=chr9:95726506..95726519,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_6_at_FGD3_5end | |description=CAGE_peak_6_at_FGD3_5end | ||
|id=chr9:95726506..95726519,+ | |id=chr9:95726506..95726519,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.06e-33!18;CL:0000789!3.06e-33!18;CL:0002420!3.06e-33!18;CL:0002419!3.06e-33!18;CL:0000790!3.06e-33!18;CL:0000838!5.27e-31!52;CL:0000542!3.23e-30!53;CL:0000051!3.23e-30!53;CL:0000084!3.34e-30!25;CL:0000827!3.34e-30!25;CL:0000625!2.75e-21!11;CL:0000738!5.07e-20!140;CL:0000037!6.84e-18!172;CL:0000566!6.84e-18!172;CL:0000988!6.46e-17!182;CL:0002087!1.13e-15!119;CL:0002032!1.98e-15!165;CL:0000837!1.98e-15!165;CL:0002031!1.36e-13!124;CL:0000624!3.70e-12!6;CL:0000623!2.48e-07!3;CL:0000825!2.48e-07!3 | |ontology_enrichment_celltype=CL:0000791!3.06e-33!18;CL:0000789!3.06e-33!18;CL:0002420!3.06e-33!18;CL:0002419!3.06e-33!18;CL:0000790!3.06e-33!18;CL:0000838!5.27e-31!52;CL:0000542!3.23e-30!53;CL:0000051!3.23e-30!53;CL:0000084!3.34e-30!25;CL:0000827!3.34e-30!25;CL:0000625!2.75e-21!11;CL:0000738!5.07e-20!140;CL:0000037!6.84e-18!172;CL:0000566!6.84e-18!172;CL:0000988!6.46e-17!182;CL:0002087!1.13e-15!119;CL:0002032!1.98e-15!165;CL:0000837!1.98e-15!165;CL:0002031!1.36e-13!124;CL:0000624!3.70e-12!6;CL:0000623!2.48e-07!3;CL:0000825!2.48e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.59e-50;18!CL:0000789;1.59e-50;18!CL:0002419;1.59e-50;18!CL:0000084;1.67e-35;25!CL:0000625;5.33e-35;11!CL:0000624;3.26e-20;6!CL:0000623;4.54e-16;3!CL:0000542;2.54e-11;53!CL:0000898;2.30e-07;3!CL:0000226;3.76e-07;3!CL:0000842;3.76e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.91e-51,18;CL:0000789,3.91e-51,18;CL:0002420,3.91e-51,18;CL:0002419,3.91e-51,18;CL:0000790,3.91e-51,18;CL:0000084,6.18e-36,25;CL:0000827,6.18e-36,25;CL:0000625,1.45e-35,11;CL:0000838,7.55e-24,52;CL:0000542,2.53e-23,53;CL:0000051,2.53e-23,53;CL:0000624,2.74e-20,6;CL:0000623,4.67e-16,3;CL:0000825,4.67e-16,3;CL:0002087,8.56e-14,115;CL:0000738,3.14e-12,136;CL:0002031,2.35e-10,120;CL:0000037,5.45e-09,168;CL:0000988,2.71e-08,177;CL:0000898,2.74e-07,3;CL:0000226,3.88e-07,3;CL:0000842,3.88e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-50;18!CL:0000051;2.54e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.50e-13!15;UBERON:0000179!2.50e-13!15;UBERON:0000463!2.50e-13!15;UBERON:0004177!8.48e-10!7;UBERON:0002370!1.04e-08!4;UBERON:0005058!1.04e-08!4;UBERON:0009113!1.04e-08!4;UBERON:0003295!1.04e-08!4;UBERON:0005562!1.04e-08!4 | |ontology_enrichment_uberon=UBERON:0000178!2.50e-13!15;UBERON:0000179!2.50e-13!15;UBERON:0000463!2.50e-13!15;UBERON:0004177!8.48e-10!7;UBERON:0002370!1.04e-08!4;UBERON:0005058!1.04e-08!4;UBERON:0009113!1.04e-08!4;UBERON:0003295!1.04e-08!4;UBERON:0005562!1.04e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.11e-11;2!UBERON:0005058;2.11e-11;2!UBERON:0009113;2.11e-11;2!UBERON:0000178;7.67e-11;15!UBERON:0000179;7.67e-11;15!UBERON:0000463;7.67e-11;15!UBERON:0002390;7.92e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.80e-12,4;UBERON:0005058,3.80e-12,4;UBERON:0009113,3.80e-12,4;UBERON:0003295,3.80e-12,4;UBERON:0005562,3.80e-12,4;UBERON:0000178,9.55e-11,15;UBERON:0000179,9.55e-11,15;UBERON:0000463,9.55e-11,15;UBERON:0003351,3.09e-08,6;UBERON:0004177,4.10e-07,7;UBERON:0005057,4.10e-07,7 | |||
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| ||
|short_description=p6@FGD3 | |short_description=p6@FGD3 | ||
}} | }} |
Latest revision as of 07:56, 18 September 2015
Short description: | p6@FGD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FGD3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 118bp_to_ENST00000468206_5end |
EntrezGene: | FGD3 |
HGNC: | 16027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.91e-51 | 18 |
alpha-beta T cell | 3.91e-51 | 18 |
immature T cell | 3.91e-51 | 18 |
mature T cell | 3.91e-51 | 18 |
immature alpha-beta T cell | 3.91e-51 | 18 |
T cell | 6.18e-36 | 25 |
pro-T cell | 6.18e-36 | 25 |
CD8-positive, alpha-beta T cell | 1.45e-35 | 11 |
lymphoid lineage restricted progenitor cell | 7.55e-24 | 52 |
lymphocyte | 2.53e-23 | 53 |
common lymphoid progenitor | 2.53e-23 | 53 |
CD4-positive, alpha-beta T cell | 2.74e-20 | 6 |
natural killer cell | 4.67e-16 | 3 |
pro-NK cell | 4.67e-16 | 3 |
nongranular leukocyte | 8.56e-14 | 115 |
leukocyte | 3.14e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 2.35e-10 | 120 |
hematopoietic stem cell | 5.45e-09 | 168 |
hematopoietic cell | 2.71e-08 | 177 |
naive T cell | 2.74e-07 | 3 |
single nucleate cell | 3.88e-07 | 3 |
mononuclear cell | 3.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.80e-12 | 4 |
hemolymphoid system gland | 3.80e-12 | 4 |
thymic region | 3.80e-12 | 4 |
pharyngeal gland | 3.80e-12 | 4 |
thymus primordium | 3.80e-12 | 4 |
blood | 9.55e-11 | 15 |
haemolymphatic fluid | 9.55e-11 | 15 |
organism substance | 9.55e-11 | 15 |
pharyngeal epithelium | 3.09e-08 | 6 |
hemopoietic organ | 4.10e-07 | 7 |
immune organ | 4.10e-07 | 7 |