FFCP PHASE1:Hg19::chr19:50004159..50004165,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:50004159..50004165,-
|short_description=p1@MIR150
|description=CAGE_peak_1_at_MIR150_5end
|association_with_transcript=-34bp_to_ENST00000385048,NR_029703,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=406942 | |EntrezGene=406942 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31537 | |HGNC=31537 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-34bp_to_ENST00000385048,NR_029703,uc010yaw.1_5end | |||
|cluster_id=chr19:50004159..50004165,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_1_at_MIR150_5end | |||
|id=chr19:50004159..50004165,- | |||
|ontology_enrichment_celltype=CL:0000738!3.81e-47!140;CL:0000037!8.80e-45!172;CL:0000566!8.80e-45!172;CL:0000838!1.61e-42!52;CL:0000542!2.30e-41!53;CL:0000051!2.30e-41!53;CL:0000988!1.89e-40!182;CL:0002032!2.74e-40!165;CL:0000837!2.74e-40!165;CL:0002087!5.20e-37!119;CL:0002031!2.41e-35!124;CL:0000084!1.99e-23!25;CL:0000827!1.99e-23!25;CL:0000791!2.67e-22!18;CL:0000789!2.67e-22!18;CL:0002420!2.67e-22!18;CL:0002419!2.67e-22!18;CL:0000790!2.67e-22!18;CL:0000945!9.20e-17!24;CL:0000826!9.20e-17!24;CL:0000236!5.56e-16!14;CL:0000625!3.50e-14!11;CL:0000763!1.39e-09!112;CL:0000049!1.39e-09!112;CL:0000624!9.58e-09!6;CL:0000766!1.85e-08!76;CL:0000134!9.48e-08!358;CL:0002320!3.85e-07!365;CL:0000094!4.82e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.99e-40;18!CL:0000789;6.99e-40;18!CL:0002419;6.99e-40;18!CL:0000084;1.29e-36;25!CL:0000542;7.45e-30;53!CL:0000625;7.44e-25;11!CL:0000236;2.78e-20;13!CL:0000624;8.98e-15;6!CL:0000945;2.36e-13;24!CL:0002087;6.36e-11;104!CL:0000094;3.50e-09;8!CL:0000898;1.31e-08;3!CL:0000623;6.96e-08;3!CL:0000767;4.96e-07;3!CL:0000738;5.97e-07;136!CL:0000226;6.08e-07;3!CL:0000842;6.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.48e-52,52;CL:0000542,3.98e-51,53;CL:0000051,3.98e-51,53;CL:0000791,6.69e-40,18;CL:0000789,6.69e-40,18;CL:0002420,6.69e-40,18;CL:0002419,6.69e-40,18;CL:0000790,6.69e-40,18;CL:0000738,8.54e-37,136;CL:0000084,1.13e-36,25;CL:0000827,1.13e-36,25;CL:0002087,3.71e-32,115;CL:0000037,4.81e-32,168;CL:0000988,1.32e-29,177;CL:0002032,2.02e-27,161;CL:0000837,2.02e-27,161;CL:0002031,3.15e-27,120;CL:0000625,7.53e-25,11;CL:0000236,7.51e-22,14;CL:0000624,8.27e-15,6;CL:0000945,2.17e-13,24;CL:0000826,2.17e-13,24;CL:0000094,3.21e-09,8;CL:0000898,1.28e-08,3;CL:0000623,7.04e-08,3;CL:0000825,7.04e-08,3;CL:0000134,2.20e-07,354;CL:0000767,4.60e-07,3;CL:0002320,5.54e-07,361;CL:0000226,6.22e-07,3;CL:0000842,6.22e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.99e-40;18!CL:0000051;7.45e-30;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.86e-15!112;UBERON:0002390!9.13e-14!102;UBERON:0003061!9.13e-14!102;UBERON:0000178!5.50e-10!15;UBERON:0000179!5.50e-10!15;UBERON:0000463!5.50e-10!15;UBERON:0002405!9.68e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.37e-18;15!UBERON:0000179;3.37e-18;15!UBERON:0000463;3.37e-18;15!UBERON:0002390;2.38e-12;32!UBERON:0002193;1.37e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.40e-18,15;UBERON:0000179,3.40e-18,15;UBERON:0000463,3.40e-18,15;UBERON:0002390,3.21e-08,98;UBERON:0003061,3.21e-08,98;UBERON:0002193,1.36e-07,108 | |||
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| ||
|short_description=p1@MIR150 | |||
}} | }} |
Latest revision as of 07:54, 19 September 2015
Short description: | p1@MIR150 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR150_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -34bp_to_ENST00000385048, NR_029703, uc010yaw.1_5end |
EntrezGene: | MIR150 |
HGNC: | 31537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.48e-52 | 52 |
lymphocyte | 3.98e-51 | 53 |
common lymphoid progenitor | 3.98e-51 | 53 |
mature alpha-beta T cell | 6.69e-40 | 18 |
alpha-beta T cell | 6.69e-40 | 18 |
immature T cell | 6.69e-40 | 18 |
mature T cell | 6.69e-40 | 18 |
immature alpha-beta T cell | 6.69e-40 | 18 |
leukocyte | 8.54e-37 | 136 |
T cell | 1.13e-36 | 25 |
pro-T cell | 1.13e-36 | 25 |
nongranular leukocyte | 3.71e-32 | 115 |
hematopoietic stem cell | 4.81e-32 | 168 |
hematopoietic cell | 1.32e-29 | 177 |
hematopoietic oligopotent progenitor cell | 2.02e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.02e-27 | 161 |
hematopoietic lineage restricted progenitor cell | 3.15e-27 | 120 |
CD8-positive, alpha-beta T cell | 7.53e-25 | 11 |
B cell | 7.51e-22 | 14 |
CD4-positive, alpha-beta T cell | 8.27e-15 | 6 |
lymphocyte of B lineage | 2.17e-13 | 24 |
pro-B cell | 2.17e-13 | 24 |
granulocyte | 3.21e-09 | 8 |
naive T cell | 1.28e-08 | 3 |
natural killer cell | 7.04e-08 | 3 |
pro-NK cell | 7.04e-08 | 3 |
mesenchymal cell | 2.20e-07 | 354 |
basophil | 4.60e-07 | 3 |
connective tissue cell | 5.54e-07 | 361 |
single nucleate cell | 6.22e-07 | 3 |
mononuclear cell | 6.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.40e-18 | 15 |
haemolymphatic fluid | 3.40e-18 | 15 |
organism substance | 3.40e-18 | 15 |
hematopoietic system | 3.21e-08 | 98 |
blood island | 3.21e-08 | 98 |
hemolymphoid system | 1.36e-07 | 108 |