FFCP PHASE1:Hg19::chr19:51538247..51538275,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:51538247..51538275,-
|short_description=p2@KLK12
|description=CAGE_peak_2_at_KLK12_5end
|association_with_transcript=-99bp_to_ENST00000250351,ENST00000319...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=43849 | |EntrezGene=43849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6360 | |HGNC=6360 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKR0,Q9UKR2 | |UniProt=Q9UKR0,Q9UKR2 | ||
|association_with_transcript=-99bp_to_ENST00000250351,ENST00000319590,NM_019598,NM_145894,NM_145895,uc002pvh.1,uc002pvi.1,uc002pvj.1_5end | |||
|cluster_id=chr19:51538247..51538275,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_2_at_KLK12_5end | |||
|id=chr19:51538247..51538275,- | |||
|ontology_enrichment_celltype=CL:0002076!1.48e-17!43;CL:0002368!7.12e-16!13;CL:0000622!2.98e-15!5;CL:0002623!1.01e-14!3;CL:0000154!9.93e-13!6;CL:0002159!2.49e-12!13;CL:0000223!5.60e-12!59;CL:0000575!8.15e-11!2;CL:0002251!6.13e-10!21;CL:0002077!1.14e-09!33;CL:0000150!1.65e-08!9;CL:0002621!3.23e-07!3;CL:0002166!5.44e-07!3;CL:0000066!5.69e-07!254;CL:0000068!5.96e-07!3;CL:0000069!5.96e-07!3;CL:0000307!5.96e-07!3;CL:0000377!5.96e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000575;6.70e-21;2!CL:0000622;7.26e-09;5!CL:0000154;1.57e-07;6!CL:0002159;6.50e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,4.25e-21,2;CL:0000622,8.17e-09,5;CL:0000154,1.74e-07,6;CL:0002159,6.30e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.01e-11;1!UBERON:0006298;4.44e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.54e-11;1!DOID:3149;2.54e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.96e-11,1;DOID:3149,2.96e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!5.81e-21!72;UBERON:0000166!7.15e-17!21;UBERON:0000065!6.46e-14!53;UBERON:0001044!9.63e-13!6;UBERON:0003293!9.63e-13!6;UBERON:0003294!9.63e-13!6;UBERON:0010047!9.63e-13!6;UBERON:0000167!9.63e-13!6;UBERON:0004119!2.74e-12!169;UBERON:0000925!2.74e-12!169;UBERON:0006595!2.74e-12!169;UBERON:0000165!3.04e-12!28;UBERON:0000930!3.04e-12!28;UBERON:0000078!3.48e-12!18;UBERON:0003126!1.09e-10!7;UBERON:0001005!1.09e-10!7;UBERON:0003127!2.54e-10!2;UBERON:0001041!6.65e-10!98;UBERON:0001444!7.37e-10!48;UBERON:0005178!1.53e-09!34;UBERON:0002224!1.53e-09!34;UBERON:0000161!1.80e-09!35;UBERON:0005181!3.18e-09!35;UBERON:0001007!2.69e-08!155;UBERON:0001555!2.69e-08!155;UBERON:0007026!2.69e-08!155;UBERON:0007196!4.83e-08!14;UBERON:0001558!4.83e-08!14;UBERON:0000002!1.13e-07!6;UBERON:0001560!1.13e-07!6;UBERON:0003408!1.14e-07!10;UBERON:0001723!1.30e-07!3;UBERON:0001033!1.30e-07!3;UBERON:0010056!1.30e-07!3;UBERON:0004921!1.62e-07!129;UBERON:0004185!1.62e-07!129;UBERON:0000077!1.63e-07!130;UBERON:0001949!3.23e-07!3;UBERON:0000072!8.31e-07!46;UBERON:0003102!9.84e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;9.71e-15;3!UBERON:0001033;9.71e-15;3!UBERON:0000165;1.65e-12;28!UBERON:0005795;1.01e-11;1!UBERON:0002372;1.78e-11;1!UBERON:0001961;1.78e-11;1!UBERON:0001744;1.78e-11;1!UBERON:0001042;1.78e-11;1!UBERON:0001735;1.78e-11;1!UBERON:0001736;4.44e-11;1!UBERON:0000964;6.17e-11;4!UBERON:0010409;6.17e-11;4!UBERON:0000033;2.99e-09;50!UBERON:0007811;1.01e-08;52!UBERON:0000161;1.43e-08;19!UBERON:0000166;1.43e-08;19!UBERON:0000153;3.65e-08;54!UBERON:0000002;1.40e-07;6!UBERON:0001560;1.40e-07;6!UBERON:0001044;1.57e-07;6!UBERON:0003293;1.57e-07;6!UBERON:0003294;1.57e-07;6!UBERON:0010047;1.57e-07;6!UBERON:0003408;1.57e-07;6!UBERON:0000167;1.57e-07;6!UBERON:0001444;2.76e-07;48!UBERON:0000020;2.89e-07;23!UBERON:0001041;5.18e-07;14!UBERON:0001032;5.74e-07;24!UBERON:0004456;5.74e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,5.40e-16,22;UBERON:0001723,1.08e-14,3;UBERON:0001033,1.08e-14,3;UBERON:0010056,1.08e-14,3;UBERON:0001444,3.86e-12,49;UBERON:0000165,4.85e-12,29;UBERON:0000930,4.85e-12,29;UBERON:0000153,6.88e-12,62;UBERON:0007811,6.88e-12,62;UBERON:0002372,1.78e-11,1;UBERON:0001961,1.78e-11,1;UBERON:0001744,1.78e-11,1;UBERON:0001735,1.78e-11,1;UBERON:0000964,4.92e-11,4;UBERON:0010409,4.92e-11,4;UBERON:0004348,4.92e-11,4;UBERON:0005427,4.92e-11,4;UBERON:0001736,5.43e-11,1;UBERON:0006298,5.43e-11,1;UBERON:0000033,1.67e-10,56;UBERON:0001042,8.74e-10,10;UBERON:0009145,8.74e-10,10;UBERON:0001004,9.77e-10,74;UBERON:0000161,1.28e-09,36;UBERON:0006562,6.11e-09,11;UBERON:0003102,1.24e-08,99;UBERON:0001041,3.70e-08,87;UBERON:0000002,1.34e-07,6;UBERON:0001560,1.34e-07,6;UBERON:0001044,1.68e-07,6;UBERON:0003293,1.68e-07,6;UBERON:0003294,1.68e-07,6;UBERON:0010047,1.68e-07,6;UBERON:0000167,1.68e-07,6;UBERON:0000072,2.57e-07,47;UBERON:0000020,5.47e-07,24;UBERON:0001032,5.47e-07,24;UBERON:0004456,5.47e-07,24 | |||
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|short_description=p2@KLK12 | |||
}} | }} |
Latest revision as of 14:09, 19 September 2015
Short description: | p2@KLK12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLK12_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -99bp_to_ENST00000250351, ENST00000319590, NM_019598, NM_145894, NM_145895, uc002pvh.1, uc002pvi.1, uc002pvj.1_5end |
EntrezGene: | KLK12 |
HGNC: | 6360 |
UniProt: | Q9UKR0Q9UKR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 4.25e-21 | 2 |
acinar cell | 8.17e-09 | 5 |
protein secreting cell | 1.74e-07 | 6 |
general ecto-epithelial cell | 6.30e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
oral opening | 5.40e-16 | 22 |
tongue | 1.08e-14 | 3 |
gustatory system | 1.08e-14 | 3 |
future tongue | 1.08e-14 | 3 |
subdivision of head | 3.86e-12 | 49 |
mouth | 4.85e-12 | 29 |
stomodeum | 4.85e-12 | 29 |
anterior region of body | 6.88e-12 | 62 |
craniocervical region | 6.88e-12 | 62 |
tonsil | 1.78e-11 | 1 |
mucosa-associated lymphoid tissue | 1.78e-11 | 1 |
lymphoid tissue | 1.78e-11 | 1 |
tonsillar ring | 1.78e-11 | 1 |
cornea | 4.92e-11 | 4 |
eye surface | 4.92e-11 | 4 |
optic eminence | 4.92e-11 | 4 |
corneal primordium | 4.92e-11 | 4 |
submandibular gland | 5.43e-11 | 1 |
submandibular gland primordium | 5.43e-11 | 1 |
head | 1.67e-10 | 56 |
chordate pharynx | 8.74e-10 | 10 |
pharyngeal region of foregut | 8.74e-10 | 10 |
respiratory system | 9.77e-10 | 74 |
orifice | 1.28e-09 | 36 |
pharynx | 6.11e-09 | 11 |
surface structure | 1.24e-08 | 99 |
foregut | 3.70e-08 | 87 |
uterine cervix | 1.34e-07 | 6 |
neck of organ | 1.34e-07 | 6 |
saliva-secreting gland | 1.68e-07 | 6 |
gland of oral region | 1.68e-07 | 6 |
gland of foregut | 1.68e-07 | 6 |
oral gland | 1.68e-07 | 6 |
oral cavity | 1.68e-07 | 6 |
segment of respiratory tract | 2.57e-07 | 47 |
sense organ | 5.47e-07 | 24 |
sensory system | 5.47e-07 | 24 |
entire sense organ system | 5.47e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.96e-11 | 1 |
keratoacanthoma | 2.96e-11 | 1 |