UBERON:0000920: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:FBbt_00000038-FMA_80224-ZFA_0000329;;UBERON:FMA_18674-MA_0001715 | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A protective, noncellular membrane that surrounds the eggs of various animals including insects and fish [GO]." [GO:0042600, Wikipedia:Chorion_(egg)] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from=UBERON:0003124 | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0000920 | |||
|is_a=UBERON:0000476 ;;UBERON:0000478 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
| | |name=egg chorion | ||
| | |namespace=FANTOM | ||
| | |obo_creation_date= | ||
|part_of=UBERON:0016887 | |||
|preceded_by= | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The egg shell. Kimmel et al, 1995.[TAO]" xsd:string | |||
|subset=dubious_grouping;;uberon_slim;;vertebrate_core | |||
|synonym="chorion" RELATED [];;"chorion (egg)" EXACT [] | |||
|union_of= | |||
|xref=FBbt:00000038;;TAO:0000329;;TGMA:0000681;;ZFA:0000329 | |||
}} | }} | ||
Latest revision as of 17:10, 12 September 2014
| Name: | egg chorion | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A protective, noncellular membrane that surrounds the eggs of various animals including insects and fish [GO]." [GO:0042600, Wikipedia:Chorion_(egg)] | ||
| Xrefs: |
| ||
| Synonyms: |
"chorion" RELATED [] "chorion (egg)" EXACT [] | ||
| Alt_id: |
UBERON:FBbt_00000038-FMA_80224-ZFA_0000329 UBERON:FMA_18674-MA_0001715 | ||
| Subset: |
dubious_grouping uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000476(acellular anatomical structure),UBERON:0000478(extraembryonic structure) |
|---|---|
| disjoint_from: | UBERON:0003124(chorion) |
| part_of: | UBERON:0016887(entire extraembryonic component) |
Children
| derives from: | FF:0000038 (human chorionic membrane stem cell sample) |
|---|---|
| part of: | FF:0000038 (human chorionic membrane stem cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 12238-129G6 (chorionic membrane cells, donor1)
- 12239-129G7 (chorionic membrane cells, donor2)
- 12240-129G8 (chorionic membrane cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000920 (egg chorion), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.79e-195 | FFCP PHASE1:Hg19::chr10:134275596..134275597,+#_fe5fa03791fd53f95982ab71229a9992 | p@chr10:134275596..134275597, + |
| 2.79e-195 | FFCP PHASE1:Hg19::chr7:150554537..150554542,+#_fe5fa03791fd53f95982ab71229a9992 | p24@ABP1 |
| 2.79e-195 | FFCP PHASE2:Hg19::chr10:134275596..134275597,+#_fe5fa03791fd53f95982ab71229a9992 | p@chr10:134275596..134275597, + |
| 2.79e-195 | FFCP PHASE2:Hg19::chr2:216693832..216693839,-#_fe5fa03791fd53f95982ab71229a9992 | p@chr2:216693832..216693839, - |
| 2.79e-195 | FFCP PHASE2:Hg19::chr19:52294756..52294758,-#_fe5fa03791fd53f95982ab71229a9992 | p@chr19:52294756..52294758, - |
| 2.79e-195 | FFCP PHASE1:Hg19::chr14:77950741..77950750,-#_fe5fa03791fd53f95982ab71229a9992 | p10@ISM2 |
| 2.79e-195 | FFCP PHASE2:Hg19::chr22:32957467..32957470,+#_fe5fa03791fd53f95982ab71229a9992 | p@chr22:32957467..32957470, + |
| 2.79e-195 | FFCP PHASE1:Hg19::chr11:76366237..76366246,+#_fe5fa03791fd53f95982ab71229a9992 | p@chr11:76366237..76366246, + |
| 2.79e-195 | FFCP PHASE2:Hg19::chr19:17423022..17423028,+#_fe5fa03791fd53f95982ab71229a9992 | p@chr19:17423022..17423028, + |
| 2.79e-195 | FFCP PHASE1:Hg19::chr2:216693832..216693839,-#_fe5fa03791fd53f95982ab71229a9992 | p@chr2:216693832..216693839, - |
| 2.79e-195 | FFCP PHASE2:Hg19::chr11:76366237..76366246,+#_fe5fa03791fd53f95982ab71229a9992 | p@chr11:76366237..76366246, + |
| 2.79e-195 | FFCP PHASE2:Hg19::chr14:77950741..77950750,-#_fe5fa03791fd53f95982ab71229a9992 | p10@ISM2 |
| 2.79e-195 | FFCP PHASE1:Hg19::chr22:32957467..32957470,+#_fe5fa03791fd53f95982ab71229a9992 | p@chr22:32957467..32957470, + |
| 2.79e-195 | FFCP PHASE1:Hg19::chr19:17423022..17423028,+#_fe5fa03791fd53f95982ab71229a9992 | p@chr19:17423022..17423028, + |
| 2.79e-195 | FFCP PHASE2:Hg19::chr7:150554537..150554542,+#_fe5fa03791fd53f95982ab71229a9992 | p24@ABP1 |
| 2.79e-195 | FFCP PHASE1:Hg19::chr19:52294756..52294758,-#_fe5fa03791fd53f95982ab71229a9992 | p@chr19:52294756..52294758, - |
| 3.27e-147 | FFCP PHASE1:Hg19::chr17:79910718..79910728,-#_8bd7dc56faa6205446c22039363dcb7d | p@chr17:79910718..79910728, - |
| 3.27e-147 | FFCP PHASE2:Hg19::chr17:79910718..79910728,-#_8bd7dc56faa6205446c22039363dcb7d | p@chr17:79910718..79910728, - |
| 3.27e-147 | FFCP PHASE2:Hg19::chr1:103299100..103299144,+#_8bd7dc56faa6205446c22039363dcb7d | p@chr1:103299100..103299144, + |
| 3.27e-147 | FFCP PHASE1:Hg19::chr1:103299100..103299144,+#_8bd7dc56faa6205446c22039363dcb7d | p@chr1:103299100..103299144, + |
| 5.41e-147 | FFCP PHASE2:Hg19::chr20:61867326..61867336,+#_18685c0069c2cc447f1fc9bee89c3388 | p4@BIRC7 |
| 5.41e-147 | FFCP PHASE2:Hg19::chr2:25862142..25862153,-#_18685c0069c2cc447f1fc9bee89c3388 | p19@DTNB |
| 5.41e-147 | FFCP PHASE2:Hg19::chr3:194445234..194445270,+#_18685c0069c2cc447f1fc9bee89c3388 | p@chr3:194445234..194445270, + |
| 5.41e-147 | FFCP PHASE2:Hg19::chr7:150554839..150554849,+#_18685c0069c2cc447f1fc9bee89c3388 | p11@ABP1 |
| 5.41e-147 | FFCP PHASE1:Hg19::chr20:61867326..61867336,+#_18685c0069c2cc447f1fc9bee89c3388 | p4@BIRC7 |
| 5.41e-147 | FFCP PHASE1:Hg19::chr2:25862142..25862153,-#_18685c0069c2cc447f1fc9bee89c3388 | p19@DTNB |
| 5.41e-147 | FFCP PHASE1:Hg19::chr3:194445234..194445270,+#_18685c0069c2cc447f1fc9bee89c3388 | p@chr3:194445234..194445270, + |
| 5.41e-147 | FFCP PHASE1:Hg19::chr7:150554839..150554849,+#_18685c0069c2cc447f1fc9bee89c3388 | p11@ABP1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr2:16804236..16804248,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p9@FAM49A |
| 8.98e-131 | FFCP PHASE2:Hg19::chr13:29004205..29004214,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr13:29004205..29004214, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr3:15493229..15493233,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr3:15493229..15493233, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr7:46073181..46073190,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr7:46073181..46073190, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr1:176708805..176708814,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr1:176708805..176708814, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr13:28959108..28959115,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p25@FLT1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chrX:110507128..110507134,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p8@CAPN6 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr14:34688978..34688987,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr14:34688978..34688987, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr5:157345802..157345806,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr5:157345802..157345806, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr22:37952104..37952119,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr22:37952104..37952119, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr1:176760549..176760561,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p19@PAPPA2 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr20:11677855..11677865,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr20:11677855..11677865, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr13:28971118..28971128,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr13:28971118..28971128, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr11:57176838..57176845,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr11:57176838..57176845, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr13:28961673..28961683,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p16@FLT1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr11:57176838..57176845,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr11:57176838..57176845, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr3:46069144..46069152,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p5@XCR1 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr13:28961673..28961683,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p16@FLT1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr1:176708805..176708814,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr1:176708805..176708814, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr1:176525848..176525853,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p23@PAPPA2 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr11:57156666..57156671,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr11:57156666..57156671, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr22:37952104..37952119,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr22:37952104..37952119, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr14:34516082..34516087,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr14:34516082..34516087, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr13:28979951..28979962,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p13@FLT1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr11:57156666..57156671,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr11:57156666..57156671, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr1:176760549..176760561,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p19@PAPPA2 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr20:11677855..11677865,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr20:11677855..11677865, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr2:16804236..16804248,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p9@FAM49A |
| 8.98e-131 | FFCP PHASE1:Hg19::chr13:29004205..29004214,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr13:29004205..29004214, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr3:15493229..15493233,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr3:15493229..15493233, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr14:34516082..34516087,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr14:34516082..34516087, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr7:46073181..46073190,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr7:46073181..46073190, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr22:33000436..33000460,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr22:33000436..33000460, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr3:46069144..46069152,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p5@XCR1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr11:76366247..76366254,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr11:76366247..76366254, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr1:176525848..176525853,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p23@PAPPA2 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr5:157345802..157345806,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr5:157345802..157345806, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr11:76366247..76366254,+#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr11:76366247..76366254, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr13:28971118..28971128,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr13:28971118..28971128, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr13:28979951..28979962,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p13@FLT1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr22:33000436..33000460,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr22:33000436..33000460, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr13:28959108..28959115,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p25@FLT1 |
| 8.98e-131 | FFCP PHASE2:Hg19::chrX:110507128..110507134,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p8@CAPN6 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr14:34688978..34688987,-#_407b1b55bcb6c60760e5dbf9edfb8d78 | p@chr14:34688978..34688987, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chrX:56057971..56057978,-#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chrX:56057971..56057978, - |
| 2.33e-118 | FFCP PHASE2:Hg19::chr1:43987714..43987727,+#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chr1:43987714..43987727, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr14:77951114..77951128,-#_5d8a4d362b722882eb1908e7ec0ebd0a | p9@ISM2 |
| 2.33e-118 | FFCP PHASE2:Hg19::chr1:120056675..120056682,+#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chr1:120056675..120056682, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr7:150553527..150553540,+#_5d8a4d362b722882eb1908e7ec0ebd0a | p10@ABP1 |
| 2.33e-118 | FFCP PHASE1:Hg19::chr17:79917433..79917443,-#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chr17:79917433..79917443, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr1:43987714..43987727,+#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chr1:43987714..43987727, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chr17:79917433..79917443,-#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chr17:79917433..79917443, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr1:120056675..120056682,+#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chr1:120056675..120056682, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr16:30123873..30123913,-#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chr16:30123873..30123913, - |
| 2.33e-118 | FFCP PHASE2:Hg19::chr4:10616734..10616776,+#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chr4:10616734..10616776, + |
| 2.33e-118 | FFCP PHASE2:Hg19::chrX:56057971..56057978,-#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chrX:56057971..56057978, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr7:150553527..150553540,+#_5d8a4d362b722882eb1908e7ec0ebd0a | p10@ABP1 |
| 2.33e-118 | FFCP PHASE2:Hg19::chr16:30123873..30123913,-#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chr16:30123873..30123913, - |
| 2.33e-118 | FFCP PHASE1:Hg19::chr4:10616734..10616776,+#_5d8a4d362b722882eb1908e7ec0ebd0a | p@chr4:10616734..10616776, + |
| 2.33e-118 | FFCP PHASE1:Hg19::chr14:77951114..77951128,-#_5d8a4d362b722882eb1908e7ec0ebd0a | p9@ISM2 |
| 3.48e-118 | FFCP PHASE1:Hg19::chr6:169498853..169498877,+#_102cf548ef5b650db80a0c3e3273b493 | p@chr6:169498853..169498877, + |
| 3.48e-118 | FFCP PHASE1:Hg19::chr1:43987687..43987701,+#_102cf548ef5b650db80a0c3e3273b493 | p@chr1:43987687..43987701, + |
| 3.48e-118 | FFCP PHASE2:Hg19::chr6:169498853..169498877,+#_102cf548ef5b650db80a0c3e3273b493 | p@chr6:169498853..169498877, + |
| 3.48e-118 | FFCP PHASE2:Hg19::chr1:43987687..43987701,+#_102cf548ef5b650db80a0c3e3273b493 | p@chr1:43987687..43987701, + |
| 5.2e-118 | FFCP PHASE2:Hg19::chr14:77965643..77965654,-#_56effde08e995be2cfa571ff0dc33728 | p8@ISM2 |
| 5.2e-118 | FFCP PHASE1:Hg19::chr14:34509180..34509193,+#_56effde08e995be2cfa571ff0dc33728 | p1@ENST00000555922 |
| 5.2e-118 | FFCP PHASE1:Hg19::chr19:4234683..4234696,+#_56effde08e995be2cfa571ff0dc33728 | p@chr19:4234683..4234696, + |
| 5.2e-118 | FFCP PHASE1:Hg19::chr7:150554953..150554959,+#_56effde08e995be2cfa571ff0dc33728 | p18@ABP1 |
| 5.2e-118 | FFCP PHASE2:Hg19::chr14:34509180..34509193,+#_56effde08e995be2cfa571ff0dc33728 | p1@ENST00000555922 |
| 5.2e-118 | FFCP PHASE2:Hg19::chr2:86094764..86094796,-#_56effde08e995be2cfa571ff0dc33728 | p9@ST3GAL5 |
| 5.2e-118 | FFCP PHASE2:Hg19::chr7:150553574..150553583,+#_56effde08e995be2cfa571ff0dc33728 | p19@ABP1 |
| 5.2e-118 | FFCP PHASE1:Hg19::chr2:86094764..86094796,-#_56effde08e995be2cfa571ff0dc33728 | p9@ST3GAL5 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "The egg shell. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
