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{{CL
{{CL
|id=CL:0000221
|alt_id=
|name=ectodermal cell
|namespace=cell
|def="A cell of the outer of the three germ layers of the embryo." [MESH:A.16.254.425.273]
|xref=FMA:72549
|is_a=CL:0002321
|synonym="ectoderm cell" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A cell of the outer of the three germ layers of the embryo." [MESH:A.16.254.425.273]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000221
|is_a=CL:0002321
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=ectodermal cell
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000924
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="ectoderm cell" EXACT []
|union_of=
|xref=FMA:72549
}}
}}

Latest revision as of 16:31, 12 September 2014

Name:ectodermal cell
Namespace:FANTOM
Definition:"A cell of the outer of the three germ layers of the embryo." [MESH:A.16.254.425.273]
Xrefs:
links:
FMA:72549
Synonyms: "ectoderm cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002321(embryonic cell)
part_of:UBERON:0000924(ectoderm)



Children


is a:CL:0000114 (surface ectodermal cell),CL:0000133 (neurectodermal cell)
develops from:CL:0002077 (ecto-epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000221 (ectodermal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.64e-59FFCP PHASE1:Mm9::chr2:87366179..87366201,+#_9e267fc24a533c5f9fb62a5d48b8f6a5p1@ENSMUST00000167296
8.64e-59FFCP PHASE2:Mm9::chr2:87366179..87366201,+#_9e267fc24a533c5f9fb62a5d48b8f6a5p1@ENSMUST00000167296
5.05e-57FFCP PHASE2:Mm9::chr7:109167666..109167667,+#_d1f3c99b36bf522566b46a6af8b74973p@chr7:109167666..109167667, +
5.05e-57FFCP PHASE1:Mm9::chr7:109167666..109167667,+#_d1f3c99b36bf522566b46a6af8b74973p@chr7:109167666..109167667, +
5.34e-57FFCP PHASE2:Mm9::chr7:111031610..111031645,-#_6b041c82ba728c062651fcbf0d48bbeap1@ENSMUST00000120890
5.34e-57FFCP PHASE1:Mm9::chr7:111031610..111031645,-#_6b041c82ba728c062651fcbf0d48bbeap1@ENSMUST00000120890
3.33e-52FFCP PHASE1:Mm9::chr2:30663055..30663094,-#_1411d65eb6fb50daa02b6418f927d71bp@chr2:30663055..30663094, -
3.33e-52FFCP PHASE2:Mm9::chr2:30663055..30663094,-#_1411d65eb6fb50daa02b6418f927d71bp@chr2:30663055..30663094, -
1.27e-51FFCP PHASE2:Mm9::chr8:125944624..125944663,+#_c85c96f251dab55111b15273701053bcp@chr8:125944624..125944663, +
1.27e-51FFCP PHASE1:Mm9::chr8:125944624..125944663,+#_c85c96f251dab55111b15273701053bcp@chr8:125944624..125944663, +
7.73e-50FFCP PHASE2:Mm9::chr7:38554684..38554696,-#_fa2ad61fcf721c17bb63faff40f2d4a8p10@Zfp536
7.73e-50FFCP PHASE1:Mm9::chr7:38554684..38554696,-#_fa2ad61fcf721c17bb63faff40f2d4a8p10@Zfp536
1.39e-47FFCP PHASE1:Mm9::chr13:9279895..9279899,+#_67dc31922df02e320b086656de336661p@chr13:9279895..9279899, +
1.39e-47FFCP PHASE2:Mm9::chr13:9279895..9279899,+#_67dc31922df02e320b086656de336661p@chr13:9279895..9279899, +
2.22e-47FFCP PHASE1:Mm9::chr9:57389282..57389286,+#_aa911332c9a4aeecedc522afc870dd62p@chr9:57389282..57389286, +
2.22e-47FFCP PHASE2:Mm9::chr9:57389282..57389286,+#_aa911332c9a4aeecedc522afc870dd62p@chr9:57389282..57389286, +
2.15e-45FFCP PHASE2:Mm9::chr15:87454726..87454739,+#_47c224715e41fb32337ace6ade9f8021p@chr15:87454726..87454739, +
2.15e-45FFCP PHASE1:Mm9::chr15:87454726..87454739,+#_47c224715e41fb32337ace6ade9f8021p@chr15:87454726..87454739, +
2.88e-44FFCP PHASE2:Mm9::chr15:85465272..85465287,+#_40044a8fea73d7c61030f969fde1ce0bp@chr15:85465272..85465287, +
2.88e-44FFCP PHASE1:Mm9::chr15:85465272..85465287,+#_40044a8fea73d7c61030f969fde1ce0bp@chr15:85465272..85465287, +
1.71e-43FFCP PHASE1:Mm9::chr9:108998049..108998061,+#_48aa02bcc4dadb7a3c439d59de5236e6p5@Plxnb1
1.71e-43FFCP PHASE2:Mm9::chr9:108998049..108998061,+#_48aa02bcc4dadb7a3c439d59de5236e6p5@Plxnb1
1.86e-43FFCP PHASE2:Mm9::chr6:7933424..7933445,-#_ff8d11266559c9861946b8d8cf7fb205p1@ENSMUST00000057757
1.86e-43FFCP PHASE1:Mm9::chr6:7933424..7933445,-#_ff8d11266559c9861946b8d8cf7fb205p1@ENSMUST00000057757
2.02e-43FFCP PHASE1:Mm9::chr14:52533766..52533777,-#_795088de4377e032e796088b21b30a64p@chr14:52533766..52533777, -
2.02e-43FFCP PHASE2:Mm9::chr14:52533766..52533777,-#_795088de4377e032e796088b21b30a64p@chr14:52533766..52533777, -
1.36e-41FFCP PHASE1:Mm9::chr3:8545615..8545628,+#_aa84e59ef7279611d819f90d2f008dccp@chr3:8545615..8545628, +
1.36e-41FFCP PHASE2:Mm9::chr3:8545615..8545628,+#_aa84e59ef7279611d819f90d2f008dccp@chr3:8545615..8545628, +
2.94e-41FFCP PHASE1:Mm9::chr17:35137753..35137781,-#_8600773289b52c289e4e75b2616c3efcp2@ENSMUST00000174517
2.94e-41FFCP PHASE2:Mm9::chr17:35137753..35137781,-#_8600773289b52c289e4e75b2616c3efcp2@ENSMUST00000174517
8.65e-41FFCP PHASE1:Mm9::chr13:99383382..99383414,+#_caef57d1b1725ee4fe3fa7f52cfd4e3bp@chr13:99383382..99383414, +
8.65e-41FFCP PHASE2:Mm9::chr13:99383382..99383414,+#_caef57d1b1725ee4fe3fa7f52cfd4e3bp@chr13:99383382..99383414, +
1.03e-40FFCP PHASE1:Mm9::chr9:75414533..75414538,-#_64f71a220cc9e1ab827a13c670ad92e6p@chr9:75414533..75414538, -
1.03e-40FFCP PHASE2:Mm9::chr9:75414533..75414538,-#_64f71a220cc9e1ab827a13c670ad92e6p@chr9:75414533..75414538, -
3.51e-40FFCP PHASE1:Mm9::chr14:26427427..26427439,+#_6ee0c06cc054baeccd999f4a81582a19p22@Zmiz1
3.51e-40FFCP PHASE2:Mm9::chr14:26427427..26427439,+#_6ee0c06cc054baeccd999f4a81582a19p22@Zmiz1
8.61e-40FFCP PHASE1:Mm9::chr3:28664288..28664311,-#_690277341c60d6a8994c792b32b06046p1@LOC100505213
8.61e-40FFCP PHASE2:Mm9::chr3:28664288..28664311,-#_690277341c60d6a8994c792b32b06046p1@LOC100505213
1.53e-39FFCP PHASE1:Mm9::chr10:57504783..57504796,+#_1b2e565bafe0cb63aa28daac4b86d78fp4@Fabp7
1.53e-39FFCP PHASE2:Mm9::chr10:57504783..57504796,+#_1b2e565bafe0cb63aa28daac4b86d78fp4@Fabp7
6.0e-39FFCP PHASE2:Mm9::chr5:115940240..115940260,+#_2062e40d1fe297f584250b0fc7aceba7p1@ENSMUST00000101833
6.0e-39FFCP PHASE1:Mm9::chr5:115940240..115940260,+#_2062e40d1fe297f584250b0fc7aceba7p1@ENSMUST00000101833
1.14e-38FFCP PHASE2:Mm9::chr12:55340225..55340232,+#_7deb45a283df22a861725170e7c37dc5p1@ENSMUST00000082671
1.14e-38FFCP PHASE1:Mm9::chr12:55340225..55340232,+#_7deb45a283df22a861725170e7c37dc5p1@ENSMUST00000082671
5.15e-38FFCP PHASE1:Mm9::chr6:144996025..144996043,-#_52f0c398308ec0636a8992c5e0e1ce5bp7@Bcat1
5.15e-38FFCP PHASE2:Mm9::chr6:144996025..144996043,-#_52f0c398308ec0636a8992c5e0e1ce5bp7@Bcat1
6.19e-38FFCP PHASE2:Mm9::chr9:20550706..20550724,-#_7cb0dcce2a1bab4f9b5ef9663528ea62p@chr9:20550706..20550724, -
6.19e-38FFCP PHASE1:Mm9::chr9:20550706..20550724,-#_7cb0dcce2a1bab4f9b5ef9663528ea62p@chr9:20550706..20550724, -
6.39e-38FFCP PHASE1:Mm9::chr13:9277420..9277424,+#_d62716d5eb232b0c57c794ef7cbdb0cap@chr13:9277420..9277424, +
6.39e-38FFCP PHASE2:Mm9::chr13:9277420..9277424,+#_d62716d5eb232b0c57c794ef7cbdb0cap@chr13:9277420..9277424, +
9.06e-38FFCP PHASE2:Mm9::chr12:52941704..52941726,-#_38f4d9245f47768c68d6cdf898d80e33p@chr12:52941704..52941726, -
9.06e-38FFCP PHASE1:Mm9::chr12:52941704..52941726,-#_38f4d9245f47768c68d6cdf898d80e33p@chr12:52941704..52941726, -
1.75e-37FFCP PHASE2:Mm9::chr16:73045578..73045594,+#_931cbda21580d06547dabe946cdbea97p@chr16:73045578..73045594, +
1.75e-37FFCP PHASE1:Mm9::chr16:73045578..73045594,+#_931cbda21580d06547dabe946cdbea97p@chr16:73045578..73045594, +
6.23e-37FFCP PHASE1:Mm9::chr8:125944694..125944740,+#_ac3db4278b3e5a80a4b27bbbc7c2da76p@chr8:125944694..125944740, +
6.23e-37FFCP PHASE2:Mm9::chr8:125944694..125944740,+#_ac3db4278b3e5a80a4b27bbbc7c2da76p@chr8:125944694..125944740, +
6.49e-37FFCP PHASE2:Mm9::chr3:55849731..55849735,-#_b33e44fdcc466e9a44d67bb6f5433079p@chr3:55849731..55849735, -
6.49e-37FFCP PHASE1:Mm9::chr3:55849731..55849735,-#_b33e44fdcc466e9a44d67bb6f5433079p@chr3:55849731..55849735, -
6.73e-37FFCP PHASE2:Mm9::chrX:98615115..98615126,-#_4ba1a980815712ee7d23a2944bd2162ap4@Zmym3
6.73e-37FFCP PHASE1:Mm9::chrX:98615115..98615126,-#_4ba1a980815712ee7d23a2944bd2162ap4@Zmym3
8.44e-37FFCP PHASE1:Mm9::chr11:99071307..99071313,-#_b681f345572025e3db8f7a967a08b028p@chr11:99071307..99071313, -
8.44e-37FFCP PHASE2:Mm9::chr11:99071307..99071313,-#_b681f345572025e3db8f7a967a08b028p@chr11:99071307..99071313, -
4.13e-36FFCP PHASE1:Mm9::chr14:40284476..40284479,-#_a13121e45d3d5bcb0639b2b6b072455cp@chr14:40284476..40284479, -
4.13e-36FFCP PHASE2:Mm9::chr14:40284476..40284479,-#_a13121e45d3d5bcb0639b2b6b072455cp@chr14:40284476..40284479, -
7.52e-36FFCP PHASE2:Mm9::chr15:68141338..68141346,+#_993037d8c5ab428ef8575bd82bc3cc38p2@Gm10045, p2@Gm10095, p2@Gm10163, p2@Gm10240, p2@Gm11703, p2@Gm13370, p2@Gm13653, p2@Gm15682, p2@Gm4478, p2@Gm5445, p2@Gm8101, p2@LOC100505283, p2@LOC634339, p2@Rpl21
7.52e-36FFCP PHASE1:Mm9::chr15:68141338..68141346,+#_993037d8c5ab428ef8575bd82bc3cc38p2@Gm10045, p2@Gm10095, p2@Gm10163, p2@Gm10240, p2@Gm11703, p2@Gm13370, p2@Gm13653, p2@Gm15682, p2@Gm4478, p2@Gm5445, p2@Gm8101, p2@LOC100505283, p2@LOC634339, p2@Rpl21
1.11e-35FFCP PHASE2:Mm9::chr7:25284618..25284623,+#_8bf3a5fe2b388965766834dd92534d29p@chr7:25284618..25284623, +
1.11e-35FFCP PHASE1:Mm9::chr7:25284618..25284623,+#_8bf3a5fe2b388965766834dd92534d29p@chr7:25284618..25284623, +
1.16e-35FFCP PHASE1:Mm9::chr18:43504798..43504810,-#_f07342003652dcaa8abca894afc101b1p@chr18:43504798..43504810, -
1.16e-35FFCP PHASE2:Mm9::chr18:43504798..43504810,-#_f07342003652dcaa8abca894afc101b1p@chr18:43504798..43504810, -
1.2e-35FFCP PHASE2:Mm9::chr13:55584144..55584165,-#_7d63054d042962b6ab87efa3b38f03cfp@chr13:55584144..55584165, -
1.2e-35FFCP PHASE1:Mm9::chr13:55584144..55584165,-#_7d63054d042962b6ab87efa3b38f03cfp@chr13:55584144..55584165, -
1.42e-35FFCP PHASE1:Mm9::chr1:170361398..170361400,-#_08634a456e224db44d57bdd36915a7c4p@chr1:170361398..170361400, -
1.42e-35FFCP PHASE2:Mm9::chr1:170361398..170361400,-#_08634a456e224db44d57bdd36915a7c4p@chr1:170361398..170361400, -
1.78e-35FFCP PHASE2:Mm9::chr7:4071200..4071211,+#_81b5e18d6585a9d9cd5c54a1c0e08c33p3@Ttyh1
1.78e-35FFCP PHASE1:Mm9::chr7:4071200..4071211,+#_81b5e18d6585a9d9cd5c54a1c0e08c33p3@Ttyh1
2.02e-35FFCP PHASE2:Mm9::chr1:42751793..42751859,-#_34604bc2e1c13fb4e6f3f00308f75677p4@2610017I09Rik
2.02e-35FFCP PHASE1:Mm9::chr1:42751793..42751859,-#_34604bc2e1c13fb4e6f3f00308f75677p4@2610017I09Rik
2.22e-35FFCP PHASE2:Mm9::chr4:130168084..130168097,+#_31219940203b530c7592ec8613224316p@chr4:130168084..130168097, +
2.22e-35FFCP PHASE1:Mm9::chr4:130168084..130168097,+#_31219940203b530c7592ec8613224316p@chr4:130168084..130168097, +
2.25e-35FFCP PHASE1:Mm9::chr7:80554269..80554280,+#_3e82e6332a78fd2cf4bbcfb42d153f6cp@chr7:80554269..80554280, +
2.25e-35FFCP PHASE2:Mm9::chr7:80554269..80554280,+#_3e82e6332a78fd2cf4bbcfb42d153f6cp@chr7:80554269..80554280, +
2.73e-35FFCP PHASE1:Mm9::chr9:22577265..22577292,-#_011c05d80f5fcfd2e420f9e014a9cee2p@chr9:22577265..22577292, -
2.73e-35FFCP PHASE2:Mm9::chr9:22577265..22577292,-#_011c05d80f5fcfd2e420f9e014a9cee2p@chr9:22577265..22577292, -
3.0e-35FFCP PHASE1:Mm9::chr9:75420607..75420611,-#_23fbdb02ccfba724bd5443b8dc5fa050p@chr9:75420607..75420611, -
3.0e-35FFCP PHASE2:Mm9::chr9:75420607..75420611,-#_23fbdb02ccfba724bd5443b8dc5fa050p@chr9:75420607..75420611, -
4.48e-35FFCP PHASE2:Mm9::chr6:146526110..146526114,-#_a5b97be2848f69eb8363370d951085aep6@4933424B01Rik
4.48e-35FFCP PHASE1:Mm9::chr6:146526110..146526114,-#_a5b97be2848f69eb8363370d951085aep6@4933424B01Rik
5.38e-35FFCP PHASE2:Mm9::chr6:118147812..118147826,-#_e965d18d6fa75f1bb02782abc4a73732p4@Ret
5.38e-35FFCP PHASE1:Mm9::chr6:118147812..118147826,-#_e965d18d6fa75f1bb02782abc4a73732p4@Ret
8.22e-35FFCP PHASE1:Mm9::chr11:96691273..96691286,-#_e44d099511e9e2974fef58e5227bffe6p6@Nfe2l1
8.22e-35FFCP PHASE2:Mm9::chr11:96691273..96691286,-#_e44d099511e9e2974fef58e5227bffe6p6@Nfe2l1
1.02e-34FFCP PHASE2:Mm9::chr16:43503720..43503739,+#_ac1cb7e6f315c19308c8efa91e2aed00p18@Zbtb20
1.02e-34FFCP PHASE1:Mm9::chr16:43503720..43503739,+#_ac1cb7e6f315c19308c8efa91e2aed00p18@Zbtb20
1.06e-34FFCP PHASE2:Mm9::chr4:39206823..39206829,-#_465ff2f24baf8beb26a631ec5f2bf7c3p1@ENSMUST00000083410
1.06e-34FFCP PHASE1:Mm9::chr4:39206823..39206829,-#_465ff2f24baf8beb26a631ec5f2bf7c3p1@ENSMUST00000083410
1.14e-34FFCP PHASE1:Mm9::chr6:78861159..78861164,+#_c71aa7b3992f078bc71c60fdc67f0014p1@ENSMUST00000083352
1.14e-34FFCP PHASE2:Mm9::chr6:78861159..78861164,+#_c71aa7b3992f078bc71c60fdc67f0014p1@ENSMUST00000083352
1.45e-34FFCP PHASE1:Mm9::chr15:87374618..87374692,+#_e27e33dce205a31879f1236ef1883ee5p2@Fam19a5
1.45e-34FFCP PHASE2:Mm9::chr15:87374618..87374692,+#_e27e33dce205a31879f1236ef1883ee5p2@Fam19a5

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