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{{CL
{{CL
|id=CL:0002577
|alt_id=
|name=placental epithelial cell
|namespace=cell
|def="An epithelial cell of the placenta." [GOC:tfm]
|xref=
|is_a=CL:0000066;;CL:0000349
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-02T03:21:30Z
|def="An epithelial cell of the placenta." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002577
|is_a=CL:0000066 ;;CL:0000349
|is_obsolete=
|located_in=
|located_in=
|name=placental epithelial cell
|namespace=FANTOM
|obo_creation_date=2011-03-02T03:21:30Z
|part_of=UBERON:0001987
|part_of=UBERON:0001987
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:44, 12 September 2014

Name:placental epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell of the placenta." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-02T03:21:30Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0000349(extraembryonic cell)
part_of:UBERON:0001987(placenta)



Children


derives from:FF:0000136 (human placental epithelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002577 (placental epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.33e-118FFCP PHASE1:Hg19::chr11:1982869..1982890,+#_ef4f7c485c626229565f9c18c29bbda8p@chr11:1982869..1982890, +
2.33e-118FFCP PHASE2:Hg19::chr11:1982869..1982890,+#_ef4f7c485c626229565f9c18c29bbda8p@chr11:1982869..1982890, +
5.2e-118FFCP PHASE1:Hg19::chr5:153858046..153858049,+#_b4c0067320767e25bea2f5802ba49d13p@chr5:153858046..153858049, +
5.2e-118FFCP PHASE2:Hg19::chr5:153858046..153858049,+#_b4c0067320767e25bea2f5802ba49d13p@chr5:153858046..153858049, +
7.78e-118FFCP PHASE2:Hg19::chr5:153854787..153854796,-#_2c8ad3eb0b89511fcb7380fb4303bb3ep@chr5:153854787..153854796, -
7.78e-118FFCP PHASE1:Hg19::chr5:153854787..153854796,-#_2c8ad3eb0b89511fcb7380fb4303bb3ep@chr5:153854787..153854796, -
1.16e-117FFCP PHASE1:Hg19::chr1:209704573..209704587,+#_988a98cb7af19216f61bacf55bfc240dp@chr1:209704573..209704587, +
1.16e-117FFCP PHASE2:Hg19::chr1:209704573..209704587,+#_988a98cb7af19216f61bacf55bfc240dp@chr1:209704573..209704587, +
1.73e-117FFCP PHASE1:Hg19::chr1:209704648..209704656,+#_24a52af07567268f9f91399093851551p@chr1:209704648..209704656, +
1.73e-117FFCP PHASE2:Hg19::chr1:209704648..209704656,+#_24a52af07567268f9f91399093851551p@chr1:209704648..209704656, +
7.95e-99FFCP PHASE1:Hg19::chr14:24729174..24729183,-#_0c87205c107d681daccea6c805f582d7p17@TGM1
7.95e-99FFCP PHASE2:Hg19::chr14:24729174..24729183,-#_0c87205c107d681daccea6c805f582d7p17@TGM1
1.55e-98FFCP PHASE2:Hg19::chr3:134044856..134044890,+#_23b10943492df83122e821162fec39f2p@chr3:134044856..134044890, +
1.55e-98FFCP PHASE1:Hg19::chr5:89143573..89143607,-#_23b10943492df83122e821162fec39f2p@chr5:89143573..89143607, -
1.55e-98FFCP PHASE2:Hg19::chr5:89143573..89143607,-#_23b10943492df83122e821162fec39f2p@chr5:89143573..89143607, -
1.55e-98FFCP PHASE1:Hg19::chr3:134044856..134044890,+#_23b10943492df83122e821162fec39f2p@chr3:134044856..134044890, +
2.17e-98FFCP PHASE1:Hg19::chr3:55384353..55384357,+#_f08e32a8ac0b5604fefdb52d0080c230p@chr3:55384353..55384357, +
2.17e-98FFCP PHASE2:Hg19::chr3:55384353..55384357,+#_f08e32a8ac0b5604fefdb52d0080c230p@chr3:55384353..55384357, +
3.03e-98FFCP PHASE2:Hg19::chr1:209704612..209704625,+#_86cc0646ed5cdb33e590d90552437b4bp@chr1:209704612..209704625, +
3.03e-98FFCP PHASE1:Hg19::chr1:209704612..209704625,+#_86cc0646ed5cdb33e590d90552437b4bp@chr1:209704612..209704625, +
4.24e-98FFCP PHASE2:Hg19::chr17:37824598..37824605,+#_b741a10344d777185a3cc73a089c10a3p15@PNMT
4.24e-98FFCP PHASE1:Hg19::chr17:37824598..37824605,+#_b741a10344d777185a3cc73a089c10a3p15@PNMT
1.52e-87FFCP PHASE1:Hg19::chr12:51785088..51785093,-#_352ba28177a4009a929efb025b9d368ep12@GALNT6
1.52e-87FFCP PHASE2:Hg19::chr12:51785088..51785093,-#_352ba28177a4009a929efb025b9d368ep12@GALNT6
2.28e-85FFCP PHASE1:Hg19::chr14:104202639..104202646,-#_46701ea0f9fc40d6009929eb64b2c96dp@chr14:104202639..104202646, -
2.28e-85FFCP PHASE2:Hg19::chr14:104202639..104202646,-#_46701ea0f9fc40d6009929eb64b2c96dp@chr14:104202639..104202646, -
3.04e-85FFCP PHASE1:Hg19::chr9:88126069..88126080,-#_87a48079163927a736803ce5b62dc83cp@chr9:88126069..88126080, -
3.04e-85FFCP PHASE1:Hg19::chr5:153855055..153855066,-#_87a48079163927a736803ce5b62dc83cp@chr5:153855055..153855066, -
3.04e-85FFCP PHASE2:Hg19::chr9:88126069..88126080,-#_87a48079163927a736803ce5b62dc83cp@chr9:88126069..88126080, -
3.04e-85FFCP PHASE2:Hg19::chr5:153855055..153855066,-#_87a48079163927a736803ce5b62dc83cp@chr5:153855055..153855066, -
4.06e-85FFCP PHASE1:Hg19::chr20:61288222..61288232,+#_79048f44b856e3ffd2a4dc2b227b5e8ep14@SLCO4A1
4.06e-85FFCP PHASE2:Hg19::chr20:61288222..61288232,+#_79048f44b856e3ffd2a4dc2b227b5e8ep14@SLCO4A1
4.06e-85FFCP PHASE2:Hg19::chr17:37824217..37824226,+#_79048f44b856e3ffd2a4dc2b227b5e8ep12@PNMT
4.06e-85FFCP PHASE1:Hg19::chr17:37824217..37824226,+#_79048f44b856e3ffd2a4dc2b227b5e8ep12@PNMT
1.28e-84FFCP PHASE2:Hg19::chr5:170239966..170239982,+#_60a02e55ac967cc5e24a5fafa8fa5132p@chr5:170239966..170239982, +
1.28e-84FFCP PHASE1:Hg19::chr5:170239966..170239982,+#_60a02e55ac967cc5e24a5fafa8fa5132p@chr5:170239966..170239982, +
2.27e-84FFCP PHASE2:Hg19::chr10:131344593..131344605,+#_bebbacb6af527839b7c98178355082c6p@chr10:131344593..131344605, +
2.27e-84FFCP PHASE1:Hg19::chr10:131344593..131344605,+#_bebbacb6af527839b7c98178355082c6p@chr10:131344593..131344605, +
3.03e-84FFCP PHASE2:Hg19::chr5:170176045..170176055,-#_60e5500f787b02c61ed165cbe487c31dp@chr5:170176045..170176055, -
3.03e-84FFCP PHASE1:Hg19::chr5:170176045..170176055,-#_60e5500f787b02c61ed165cbe487c31dp@chr5:170176045..170176055, -
7.81e-75FFCP PHASE2:Hg19::chr2:237683203..237683210,+#_a7d0ae1e67c57a0e5d01e2aaad8f6651p@chr2:237683203..237683210, +
7.81e-75FFCP PHASE1:Hg19::chr19:36593849..36593866,+#_a7d0ae1e67c57a0e5d01e2aaad8f6651p@chr19:36593849..36593866, +
7.81e-75FFCP PHASE2:Hg19::chr19:36593849..36593866,+#_a7d0ae1e67c57a0e5d01e2aaad8f6651p@chr19:36593849..36593866, +
7.81e-75FFCP PHASE1:Hg19::chr2:237683203..237683210,+#_a7d0ae1e67c57a0e5d01e2aaad8f6651p@chr2:237683203..237683210, +
1.29e-74FFCP PHASE1:Hg19::chr3:146323019..146323049,-#_556db4f293f64a5ba168d570c432de66p1@PLSCR5
1.29e-74FFCP PHASE2:Hg19::chr3:146323019..146323049,-#_556db4f293f64a5ba168d570c432de66p1@PLSCR5
1.66e-74FFCP PHASE2:Hg19::chr8:27995319..27995365,+#_f63d06dd2f9bff772ee7daa1e5884e41p@chr8:27995319..27995365, +
1.66e-74FFCP PHASE1:Hg19::chr8:27995319..27995365,+#_f63d06dd2f9bff772ee7daa1e5884e41p@chr8:27995319..27995365, +
3.54e-74FFCP PHASE1:Hg19::chr11:1950008..1950019,+#_d902147939db10102fc90d76916963d3p@chr11:1950008..1950019, +
3.54e-74FFCP PHASE2:Hg19::chr11:1950008..1950019,+#_d902147939db10102fc90d76916963d3p@chr11:1950008..1950019, +
9.64e-74FFCP PHASE2:Hg19::chr17:2278441..2278454,+#_8c001e5f36105abf0d23540ee6b0cca5p13@SGSM2
9.64e-74FFCP PHASE1:Hg19::chr17:2278441..2278454,+#_8c001e5f36105abf0d23540ee6b0cca5p13@SGSM2
9.82e-67FFCP PHASE1:Hg19::chr2:237682972..237682977,+#_381d94f2097d557c670dcd0ba6ff0b9ap@chr2:237682972..237682977, +
9.82e-67FFCP PHASE2:Hg19::chr2:237682972..237682977,+#_381d94f2097d557c670dcd0ba6ff0b9ap@chr2:237682972..237682977, +
1.23e-66FFCP PHASE1:Hg19::chr19:36592910..36592917,+#_a8784ff9033a58c608852c55b5429542p@chr19:36592910..36592917, +
1.23e-66FFCP PHASE2:Hg19::chr19:36592910..36592917,+#_a8784ff9033a58c608852c55b5429542p@chr19:36592910..36592917, +
1.92e-66FFCP PHASE2:Hg19::chr3:54925431..54925442,+#_a54234e2a1f836dcf0877c4ef423c311p@chr3:54925431..54925442, +
1.92e-66FFCP PHASE1:Hg19::chr3:54925431..54925442,+#_a54234e2a1f836dcf0877c4ef423c311p@chr3:54925431..54925442, +
2.39e-66FFCP PHASE2:Hg19::chr2:75796805..75796806,-#_bb27161f6394f5e7be900a06d93e7004p25@FAM176A
2.39e-66FFCP PHASE1:Hg19::chr2:75796805..75796806,-#_bb27161f6394f5e7be900a06d93e7004p25@FAM176A
2.41e-66FFCP PHASE2:Hg19::chr10:134227398..134227410,+#_fab42f218fb2065028e9d3e1a2e96dcap@chr10:134227398..134227410, +
2.41e-66FFCP PHASE1:Hg19::chr10:134227398..134227410,+#_fab42f218fb2065028e9d3e1a2e96dcap@chr10:134227398..134227410, +
3.35e-66FFCP PHASE1:Hg19::chr1:209704633..209704641,+#_ee6fb42530daa9b85557599eb7cd41dfp@chr1:209704633..209704641, +
3.35e-66FFCP PHASE2:Hg19::chr1:209704633..209704641,+#_ee6fb42530daa9b85557599eb7cd41dfp@chr1:209704633..209704641, +
3.76e-66FFCP PHASE2:Hg19::chr17:2278481..2278491,+#_03d2407e50f788909cc7cf4ae54c41fcp14@SGSM2
3.76e-66FFCP PHASE1:Hg19::chr17:2278481..2278491,+#_03d2407e50f788909cc7cf4ae54c41fcp14@SGSM2
4.68e-66FFCP PHASE1:Hg19::chr11:64008110..64008119,+#_3637cf93e85e6d7b7eb9c80b878f0479p23@FKBP2
4.68e-66FFCP PHASE2:Hg19::chr11:64008110..64008119,+#_3637cf93e85e6d7b7eb9c80b878f0479p23@FKBP2
5.88e-66FFCP PHASE2:Hg19::chr6:31083761..31083775,-#_5f617f3000b193c292f01b93ae0e4e90p@chr6:31083761..31083775, -
5.88e-66FFCP PHASE1:Hg19::chr6:31083761..31083775,-#_5f617f3000b193c292f01b93ae0e4e90p@chr6:31083761..31083775, -
7.35e-66FFCP PHASE1:Hg19::chr6:31083723..31083738,-#_af539e44cc8cbeb39363c6b2396456eep@chr6:31083723..31083738, -
7.35e-66FFCP PHASE2:Hg19::chr6:31083723..31083738,-#_af539e44cc8cbeb39363c6b2396456eep@chr6:31083723..31083738, -
1.33e-60FFCP PHASE1:Hg19::chr19:36592982..36592993,+#_1fabe95a62746a0e7c552e8850bbc7e6p@chr19:36592982..36592993, +
1.33e-60FFCP PHASE2:Hg19::chr19:36592959..36592975,+#_1fabe95a62746a0e7c552e8850bbc7e6p@chr19:36592959..36592975, +
1.33e-60FFCP PHASE2:Hg19::chr19:36592982..36592993,+#_1fabe95a62746a0e7c552e8850bbc7e6p@chr19:36592982..36592993, +
1.33e-60FFCP PHASE1:Hg19::chr19:36592959..36592975,+#_1fabe95a62746a0e7c552e8850bbc7e6p@chr19:36592959..36592975, +
4.46e-60FFCP PHASE1:Hg19::chr18:6286777..6286797,+#_81d8b46f2beffb478d1ed02e07335106p@chr18:6286777..6286797, +
4.46e-60FFCP PHASE1:Hg19::chr14:24729251..24729267,-#_81d8b46f2beffb478d1ed02e07335106p9@TGM1
4.46e-60FFCP PHASE2:Hg19::chr18:6286777..6286797,+#_81d8b46f2beffb478d1ed02e07335106p@chr18:6286777..6286797, +
4.46e-60FFCP PHASE2:Hg19::chr14:24729251..24729267,-#_81d8b46f2beffb478d1ed02e07335106p9@TGM1
7.24e-55FFCP PHASE2:Hg19::chr16:81679150..81679182,+#_35de35ad2f6b32ddf5382a26290db101p17@CMIP
7.24e-55FFCP PHASE1:Hg19::chr16:81679150..81679182,+#_35de35ad2f6b32ddf5382a26290db101p17@CMIP
8.69e-55FFCP PHASE1:Hg19::chr20:61287795..61287809,+#_01e47c42c98026ac645f8f90d7c61119p4@SLCO4A1
8.69e-55FFCP PHASE2:Hg19::chr20:61287795..61287809,+#_01e47c42c98026ac645f8f90d7c61119p4@SLCO4A1
1.25e-54FFCP PHASE2:Hg19::chr6:12161831..12161855,+#_df7521856e8b6eb4e7ea78a1fcc16918p@chr6:12161831..12161855, +
1.25e-54FFCP PHASE1:Hg19::chr6:12161831..12161855,+#_df7521856e8b6eb4e7ea78a1fcc16918p@chr6:12161831..12161855, +
1.81e-54FFCP PHASE1:Hg19::chr10:50818416..50818427,+#_3ac1905ecc2b88499b7af2b4a9dd565bp3@SLC18A3
1.81e-54FFCP PHASE2:Hg19::chr10:50818416..50818427,+#_3ac1905ecc2b88499b7af2b4a9dd565bp3@SLC18A3
2.19e-53FFCP PHASE1:Hg19::chr19:48980975..48980978,+#_dd5aa7d188bc2b93b3a242d0aa34d9edp@chr19:48980975..48980978, +
2.19e-53FFCP PHASE2:Hg19::chr11:16893073..16893090,-#_dd5aa7d188bc2b93b3a242d0aa34d9edp@chr11:16893073..16893090, -
2.19e-53FFCP PHASE2:Hg19::chr19:48980975..48980978,+#_dd5aa7d188bc2b93b3a242d0aa34d9edp@chr19:48980975..48980978, +
2.19e-53FFCP PHASE1:Hg19::chr11:16893073..16893090,-#_dd5aa7d188bc2b93b3a242d0aa34d9edp@chr11:16893073..16893090, -
3.75e-53FFCP PHASE1:Hg19::chr12:4140802..4140815,+#_7f313eb7a32b4beefd371dde70e6845fp@chr12:4140802..4140815, +
3.75e-53FFCP PHASE1:Hg19::chr19:45848386..45848393,+#_7f313eb7a32b4beefd371dde70e6845fp6@KLC3
3.75e-53FFCP PHASE2:Hg19::chr12:4140802..4140815,+#_7f313eb7a32b4beefd371dde70e6845fp@chr12:4140802..4140815, +
3.75e-53FFCP PHASE2:Hg19::chr19:45848386..45848393,+#_7f313eb7a32b4beefd371dde70e6845fp6@KLC3
6.85e-51FFCP PHASE2:Hg19::chr5:153858071..153858085,+#_0c3788dc4e20bda1326ad544b94a18aap@chr5:153858071..153858085, +
6.85e-51FFCP PHASE1:Hg19::chr5:153858071..153858085,+#_0c3788dc4e20bda1326ad544b94a18aap@chr5:153858071..153858085, +
8.11e-51FFCP PHASE1:Hg19::chr5:153855212..153855222,-#_519d166372a08472299e6d0993a08266p@chr5:153855212..153855222, -
8.11e-51FFCP PHASE1:Hg19::chr2:237683156..237683171,+#_519d166372a08472299e6d0993a08266p@chr2:237683156..237683171, +

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