FFCP PHASE1:Hg19::chr19:6693002..6693023,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:6693002..6693023,-
|short_description=p9@C3
|description=CAGE_peak_9_at_C3_5end
|association_with_transcript=70bp_to_uc002mfl.2_5end
|EntrezGene=718
|HG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=718 | |EntrezGene=718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |HGNC=1318 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=70bp_to_uc002mfl.2_5end | |||
|cluster_id=chr19:6693002..6693023,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_9_at_C3_5end | |||
|id=chr19:6693002..6693023,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.21e-24;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.66e-24,12;CL:0000223,9.96e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.49e-20;11!UBERON:0009497;3.02e-17;13!UBERON:0003104;1.57e-08;31!UBERON:0001041;6.20e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-22!115;UBERON:0000477!8.81e-14!286;UBERON:0004111!2.63e-13!241;UBERON:0000025!1.34e-11!194;UBERON:0002365!2.63e-10!31;UBERON:0002330!2.63e-10!31;UBERON:0009854!2.72e-09!23;UBERON:0002107!2.87e-09!19;UBERON:0006925!2.87e-09!19;UBERON:0008836!2.87e-09!19;UBERON:0009497!4.57e-09!25;UBERON:0000015!4.57e-09!25;UBERON:0002423!4.57e-09!25;UBERON:0006235!4.57e-09!25;UBERON:0004161!4.57e-09!25;UBERON:0008835!1.98e-08!22;UBERON:0003894!1.98e-08!22;UBERON:0005057!3.64e-08!26;UBERON:0009856!1.11e-07!26;UBERON:0002368!1.24e-07!35;UBERON:0000483!1.71e-07!309;UBERON:0000481!2.03e-07!347;UBERON:0002530!2.25e-07!59;UBERON:0003914!3.01e-07!118;UBERON:0000119!3.24e-07!312;UBERON:0007499!6.53e-07!25;UBERON:0000467!7.37e-07!625;UBERON:0000480!8.71e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.05e-24;19!UBERON:0006925;7.05e-24;19!UBERON:0002423;1.12e-17;25!UBERON:0002365;3.55e-16;31!UBERON:0002330;3.55e-16;31!UBERON:0002368;5.87e-12;33!UBERON:0000949;2.77e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.09e-24,19;UBERON:0006925,9.09e-24,19;UBERON:0008836,9.09e-24,19;UBERON:0009854,3.44e-23,23;UBERON:0008835,2.92e-20,22;UBERON:0003894,2.92e-20,22;UBERON:0009856,2.96e-20,26;UBERON:0007499,1.35e-17,25;UBERON:0009497,1.35e-17,25;UBERON:0000015,1.35e-17,25;UBERON:0002423,1.35e-17,25;UBERON:0006235,1.35e-17,25;UBERON:0004161,1.35e-17,25;UBERON:0002365,1.11e-16,31;UBERON:0002330,1.11e-16,31;UBERON:0003914,6.58e-13,117;UBERON:0005256,3.43e-12,122;UBERON:0002368,5.16e-12,35;UBERON:0005172,2.44e-10,54;UBERON:0005173,2.44e-10,54;UBERON:0003929,2.81e-10,54;UBERON:0003104,3.03e-10,160;UBERON:0009142,3.03e-10,160;UBERON:0002530,3.16e-09,59;UBERON:0002417,4.62e-09,60;UBERON:0000916,4.62e-09,60;UBERON:0000949,6.36e-09,45;UBERON:0000490,3.37e-07,148;UBERON:0000025,8.57e-07,192 | |||
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| ||
|short_description=p9@C3 | |||
}} | }} |
Latest revision as of 17:58, 24 September 2015
Short description: | p9@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 70bp_to_uc002mfl.2_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.66e-24 | 12 |
endodermal cell | 9.96e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 9.09e-24 | 19 |
digestive gland | 9.09e-24 | 19 |
liver bud | 9.09e-24 | 19 |
digestive tract diverticulum | 3.44e-23 | 23 |
hepatic diverticulum | 2.92e-20 | 22 |
liver primordium | 2.92e-20 | 22 |
sac | 2.96e-20 | 26 |
epithelial sac | 1.35e-17 | 25 |
epithelium of foregut-midgut junction | 1.35e-17 | 25 |
anatomical boundary | 1.35e-17 | 25 |
hepatobiliary system | 1.35e-17 | 25 |
foregut-midgut junction | 1.35e-17 | 25 |
septum transversum | 1.35e-17 | 25 |
exocrine gland | 1.11e-16 | 31 |
exocrine system | 1.11e-16 | 31 |
epithelial tube | 6.58e-13 | 117 |
trunk mesenchyme | 3.43e-12 | 122 |
endocrine gland | 5.16e-12 | 35 |
abdomen element | 2.44e-10 | 54 |
abdominal segment element | 2.44e-10 | 54 |
gut epithelium | 2.81e-10 | 54 |
mesenchyme | 3.03e-10 | 160 |
entire embryonic mesenchyme | 3.03e-10 | 160 |
gland | 3.16e-09 | 59 |
abdominal segment of trunk | 4.62e-09 | 60 |
abdomen | 4.62e-09 | 60 |
endocrine system | 6.36e-09 | 45 |
unilaminar epithelium | 3.37e-07 | 148 |
tube | 8.57e-07 | 192 |