FFCP PHASE1:Hg19::chr11:93468399..93468405,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79101,677822 | |EntrezGene=79101,677822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32633,28759 | |HGNC=32633,28759 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000388090,ENST00000529435,NR_002973,uc009ywh.2_5end | |association_with_transcript=0bp_to_ENST00000388090,ENST00000529435,NR_002973,uc009ywh.2_5end | ||
|cluster_id=chr11:93468399..93468405,- | |||
|coexpression_cluster_id=C229 | |coexpression_cluster_id=C229 | ||
|description=CAGE_peak_19_at_TAF1D_5end,CAGE_peak_1_at_SNORA40_5end | |description=CAGE_peak_19_at_TAF1D_5end,CAGE_peak_1_at_SNORA40_5end | ||
|id=chr11:93468399..93468405,- | |id=chr11:93468399..93468405,- | ||
|ontology_enrichment_celltype=CL:0002564;5.96e-34;3!CL:0002570;9.39e-14;8 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002564;5.96e-34;3!CL:0002570;9.39e-14;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002564,5.96e-34,3;CL:0002570,9.39e-14,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002242;5.96e-34;3!UBERON:0011135;5.15e-21;5!UBERON:0002216;5.15e-21;5!UBERON:0011134;5.15e-21;5!UBERON:0002209;5.15e-21;5!UBERON:0002213;5.15e-21;5!UBERON:0007844;5.15e-21;5!UBERON:0011138;5.15e-21;5!UBERON:0001130;5.15e-21;5!UBERON:0001066;5.15e-21;5!UBERON:0001468;5.15e-21;5!UBERON:0004905;1.07e-13;8!UBERON:0000982;1.07e-13;8!UBERON:0004770;1.07e-13;8!UBERON:0001013;1.86e-08;14!UBERON:0000075;1.54e-07;16 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;5.96e-34;3!UBERON:0011135;5.15e-21;5!UBERON:0002216;5.15e-21;5!UBERON:0011134;5.15e-21;5!UBERON:0002209;5.15e-21;5!UBERON:0002213;5.15e-21;5!UBERON:0007844;5.15e-21;5!UBERON:0011138;5.15e-21;5!UBERON:0001130;5.15e-21;5!UBERON:0001066;5.15e-21;5!UBERON:0001468;5.15e-21;5!UBERON:0004905;1.07e-13;8!UBERON:0000982;1.07e-13;8!UBERON:0004770;1.07e-13;8!UBERON:0001013;1.86e-08;14!UBERON:0000075;1.54e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,5.96e-34,3;UBERON:0003068,5.96e-34,3;UBERON:0002328,5.96e-34,3;UBERON:0004880,5.96e-34,3;UBERON:0011135,5.15e-21,5;UBERON:0002216,5.15e-21,5;UBERON:0011134,5.15e-21,5;UBERON:0002209,5.15e-21,5;UBERON:0002213,5.15e-21,5;UBERON:0005856,5.15e-21,5;UBERON:0005866,5.15e-21,5;UBERON:0005863,5.15e-21,5;UBERON:0007844,5.15e-21,5;UBERON:0011138,5.15e-21,5;UBERON:0001130,5.15e-21,5;UBERON:0001066,5.15e-21,5;UBERON:0001468,5.15e-21,5;UBERON:0004905,1.07e-13,8;UBERON:0000982,1.07e-13,8;UBERON:0004770,1.07e-13,8;UBERON:0001013,1.86e-08,14;UBERON:0011137,2.00e-08,14;UBERON:0000075,1.54e-07,16 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.506522046658319,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,27.049688081792,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0.276242966807689,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0,0,0.637705090915289,0,0,0,0.324621940274555,0,0,0,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0.217294743844016,0.638002319463839,0.0915975934018623,0,0,0,0,0.451191321234361,0,0,0,0,0.421996129056054,0.163232808159148,0.141353071433941,0,0.995261931078505,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.261177619741208,0,0,0.387025325156341,0.511625219603299,0.656923656425674,0,0,0,0,0,0.126621591911757,0.195551382734803,0.0801588202515337,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0.39997479170986,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.222462803784138,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0,0.101988829741982,0.26721740526556,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0,0.224263725161227,0,0.202117188958219,0,0,0,0.0717222053926763,0,0.244209805832924,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.506522046658319,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,27.049688081792,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0.276242966807689,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0,0,0.637705090915289,0,0,0,0.324621940274555,0,0,0,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0.217294743844016,0.638002319463839,0.0915975934018623,0,0,0,0,0.451191321234361,0,0,0,0,0.421996129056054,0.163232808159148,0.141353071433941,0,0.995261931078505,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.261177619741208,0,0,0.387025325156341,0.511625219603299,0.656923656425674,0,0,0,0,0,0.126621591911757,0.195551382734803,0.0801588202515337,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0.39997479170986,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.222462803784138,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0,0.101988829741982,0.26721740526556,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0,0.224263725161227,0,0.202117188958219,0,0,0,0.0717222053926763,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p19@TAF1D,p1@SNORA40 | |short_description=p19@TAF1D,p1@SNORA40 | ||
}} | }} |
Latest revision as of 02:53, 25 September 2015
Short description: | p19@TAF1D, p1@SNORA40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TAF1D_5end, CAGE_peak_1_at_SNORA40_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 0bp_to_ENST00000388090, ENST00000529435, NR_002973, uc009ywh.2_5end |
EntrezGene: | 79101,677822 |
HGNC: | 28759&submit=Submit 32633, 28759 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 5.96e-34 | 3 |
mesenchymal stem cell of adipose | 9.39e-14 | 8 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 5.96e-34 | 3 |
axial mesoderm | 5.96e-34 | 3 |
notochord | 5.96e-34 | 3 |
chordamesoderm | 5.96e-34 | 3 |
intervertebral cartilage | 5.15e-21 | 5 |
symphysis | 5.15e-21 | 5 |
nonsynovial joint | 5.15e-21 | 5 |
fibrous joint | 5.15e-21 | 5 |
cartilaginous joint | 5.15e-21 | 5 |
developing mesenchymal condensation | 5.15e-21 | 5 |
pre-cartilage condensation | 5.15e-21 | 5 |
cartilaginous condensation | 5.15e-21 | 5 |
cartilage element | 5.15e-21 | 5 |
post-cranial axial skeletal system | 5.15e-21 | 5 |
vertebral column | 5.15e-21 | 5 |
intervertebral disk | 5.15e-21 | 5 |
intervertebral joint | 5.15e-21 | 5 |
articulation | 1.07e-13 | 8 |
skeletal joint | 1.07e-13 | 8 |
articular system | 1.07e-13 | 8 |
adipose tissue | 1.86e-08 | 14 |
axial skeletal system | 2.00e-08 | 14 |
subdivision of skeletal system | 1.54e-07 | 16 |