FFCP PHASE1:Hg19::chr1:100111456..100111469,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:100111456..100111469,+
|short_description=p10@PALMD
|description=CAGE_peak_10_at_PALMD_5end
|association_with_transcript=25bp_to_NM_017734,uc001dsf.2,uc001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54873 | |EntrezGene=54873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15846 | |HGNC=15846 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP74 | |UniProt=Q9NP74 | ||
|association_with_transcript=25bp_to_NM_017734,uc001dsf.2,uc001dsg.2_5end | |||
|cluster_id=chr1:100111456..100111469,+ | |||
|description=CAGE_peak_10_at_PALMD_5end | |||
|id=chr1:100111456..100111469,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.91e-19!24;CL:0000071!2.08e-12!18;CL:0002546!2.08e-12!18;CL:0000115!3.36e-12!35;CL:0002078!2.44e-09!44;CL:0005020!1.63e-08!6;CL:0002138!1.63e-08!6;CL:0005022!1.63e-08!6;CL:1000413!2.13e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.88e-25;12!CL:0002139;1.77e-21;24!CL:0002545;2.77e-18;2!CL:0002544;1.61e-13;6!CL:0002138;3.72e-13;6!CL:0000071;1.05e-11;18!CL:0000115;6.70e-11;36!CL:1000413;3.50e-09;9!CL:0002078;7.76e-09;45!CL:0000213;6.91e-07;58!CL:0000215;6.91e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-24,12;CL:0002139,1.54e-21,24;CL:0002545,2.66e-18,2;CL:0000115,5.11e-14,36;CL:0002544,1.65e-13,6;CL:0005020,3.22e-13,6;CL:0002138,3.22e-13,6;CL:0005022,3.22e-13,6;CL:0000071,1.02e-11,18;CL:0002546,1.02e-11,18;CL:0002078,5.27e-11,45;CL:1000413,3.56e-09,9;CL:0000213,2.67e-08,58;CL:0000215,2.67e-08,58 | |||
|ontology_enrichment_development_v019=CL:0005022;3.72e-13;6!UBERON:0004161;1.33e-12;11!CL:0002546;1.05e-11;18!UBERON:0009497;1.09e-10;13!UBERON:0001041;6.88e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;1.48e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.62e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000477!1.46e-22!286;UBERON:0004111!1.21e-21!241;UBERON:0007023!3.01e-21!115;UBERON:0000025!7.80e-19!194;UBERON:0001986!2.08e-12!18;UBERON:0004638!2.08e-12!18;UBERON:0004852!2.08e-12!18;UBERON:0000467!5.18e-12!625;UBERON:0000480!6.33e-12!626;UBERON:0000483!2.48e-11!309;UBERON:0000119!5.50e-11!312;UBERON:0000055!1.45e-10!69;UBERON:0000468!2.96e-10!659;UBERON:0000481!6.16e-10!347;UBERON:0003075!7.07e-10!86;UBERON:0007284!7.07e-10!86;UBERON:0000487!2.39e-09!22;UBERON:0001049!2.76e-09!57;UBERON:0005068!2.76e-09!57;UBERON:0006241!2.76e-09!57;UBERON:0007135!2.76e-09!57;UBERON:0003914!2.95e-09!118;UBERON:0002049!2.98e-09!79;UBERON:0007798!2.98e-09!79;UBERON:0002346!5.52e-09!90;UBERON:0001017!7.49e-08!82;UBERON:0002616!8.78e-08!59;UBERON:0003080!9.12e-08!42;UBERON:0006914!1.00e-07!25;UBERON:0000955!1.25e-07!69;UBERON:0006238!1.25e-07!69;UBERON:0001981!1.54e-07!60;UBERON:0007500!1.54e-07!60;UBERON:0004537!1.54e-07!60;UBERON:0006965!1.54e-07!60;UBERON:0004872!1.98e-07!84;UBERON:0003915!2.13e-07!9;UBERON:0004700!2.13e-07!9;UBERON:0001917!2.13e-07!9;UBERON:0000923!2.14e-07!604;UBERON:0005291!2.14e-07!604;UBERON:0006598!2.14e-07!604;UBERON:0002532!2.14e-07!604;UBERON:0001009!2.50e-07!113;UBERON:0002050!2.51e-07!605;UBERON:0005423!2.51e-07!605;UBERON:0000922!3.30e-07!612;UBERON:0002780!4.25e-07!41;UBERON:0001890!4.25e-07!41;UBERON:0006240!4.25e-07!41;UBERON:0005743!4.30e-07!86;UBERON:0000062!7.94e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.25e-21;19!UBERON:0006925;5.25e-21;19!UBERON:0005800;2.77e-18;2!UBERON:0001515;2.77e-18;2!UBERON:0002423;8.60e-16;25!UBERON:0002365;5.09e-12;31!UBERON:0002330;5.09e-12;31!UBERON:0004638;1.05e-11;18!UBERON:0001986;1.05e-11;18!UBERON:0004852;1.05e-11;18!UBERON:0002368;1.06e-11;33!UBERON:0001473;5.33e-10;8!UBERON:0004536;5.33e-10;8!UBERON:0006558;5.33e-10;8!UBERON:0002135;1.48e-09;1!UBERON:0000487;1.52e-09;22!UBERON:0003915;3.50e-09;9!UBERON:0004700;3.50e-09;9!UBERON:0001917;3.50e-09;9!UBERON:0006914;2.24e-08;25!UBERON:0000949;3.74e-08;43!UBERON:0002465;4.26e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.51e-21,19;UBERON:0006925,6.51e-21,19;UBERON:0008836,6.51e-21,19;UBERON:0005800,2.66e-18,2;UBERON:0001515,2.66e-18,2;UBERON:0008835,5.78e-18,22;UBERON:0003894,5.78e-18,22;UBERON:0009854,3.75e-17,23;UBERON:0007499,1.01e-15,25;UBERON:0009497,1.01e-15,25;UBERON:0000015,1.01e-15,25;UBERON:0002423,1.01e-15,25;UBERON:0006235,1.01e-15,25;UBERON:0004161,1.01e-15,25;UBERON:0009856,4.34e-15,26;UBERON:0002365,1.56e-12,31;UBERON:0002330,1.56e-12,31;UBERON:0004638,1.02e-11,18;UBERON:0001986,1.02e-11,18;UBERON:0004852,1.02e-11,18;UBERON:0002368,5.14e-11,35;UBERON:0001473,4.79e-10,8;UBERON:0004536,4.79e-10,8;UBERON:0006558,4.79e-10,8;UBERON:0003914,6.47e-10,117;UBERON:0002135,8.91e-10,1;UBERON:0000487,1.48e-09,22;UBERON:0004111,2.52e-09,240;UBERON:0003915,3.56e-09,9;UBERON:0004700,3.56e-09,9;UBERON:0001917,3.56e-09,9;UBERON:0000055,9.28e-09,68;UBERON:0000949,2.14e-08,45;UBERON:0006914,2.19e-08,25;UBERON:0000025,2.62e-08,192;UBERON:0002465,3.92e-08,10;UBERON:0002049,1.82e-07,78;UBERON:0007798,1.82e-07,78;UBERON:0003929,7.26e-07,54;UBERON:0005172,7.26e-07,54;UBERON:0005173,7.26e-07,54 | |||
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| ||
|short_description=p10@PALMD | |||
}} | }} |
Latest revision as of 03:06, 25 September 2015
Short description: | p10@PALMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PALMD_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_NM_017734, uc001dsf.2, uc001dsg.2_5end |
EntrezGene: | PALMD |
HGNC: | 15846 |
UniProt: | Q9NP74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.41e-24 | 12 |
endothelial cell of vascular tree | 1.54e-21 | 24 |
thoracic aorta endothelial cell | 2.66e-18 | 2 |
endothelial cell | 5.11e-14 | 36 |
aortic endothelial cell | 1.65e-13 | 6 |
lymphangioblast | 3.22e-13 | 6 |
endothelial cell of lymphatic vessel | 3.22e-13 | 6 |
vascular lymphangioblast | 3.22e-13 | 6 |
blood vessel endothelial cell | 1.02e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.02e-11 | 18 |
meso-epithelial cell | 5.27e-11 | 45 |
endothelial cell of artery | 3.56e-09 | 9 |
lining cell | 2.67e-08 | 58 |
barrier cell | 2.67e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.62e-09 | 1 |