FFCP PHASE1:Hg19::chr10:94607612..94607616,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:94607612..94607616,+ | |||
|description=CAGE_peak_at_chr10:94607612..94607616,+ | |description=CAGE_peak_at_chr10:94607612..94607616,+ | ||
|id=chr10:94607612..94607616,+ | |id=chr10:94607612..94607616,+ | ||
|ontology_enrichment_celltype=CL:0002618;1.12e-38;3!CL:0002543;6.17e-20;6!CL:0002138;8.62e-20;6!CL:0002139;2.27e-19;24!CL:0000047;1.91e-15;2!CL:0000115;8.70e-10;36!CL:0000071;2.64e-07;18!CL:0002078;8.58e-07;45 | |ontology_enrichment_celltype=CL:0002139!2.64e-16!24;CL:0005020!3.32e-16!6;CL:0002138!3.32e-16!6;CL:0005022!3.32e-16!6;CL:0000115!8.12e-14!35;CL:0002078!3.45e-10!44;CL:0002618!2.12e-09!3;CL:0002543!7.55e-08!6;CL:0000213!5.00e-07!57;CL:0000215!5.00e-07!57 | ||
| | |ontology_enrichment_celltype_v019=CL:0002618;1.12e-38;3!CL:0002543;6.17e-20;6!CL:0002138;8.62e-20;6!CL:0002139;2.27e-19;24!CL:0000047;1.91e-15;2!CL:0000115;8.70e-10;36!CL:0000071;2.64e-07;18!CL:0002078;8.58e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0002618,1.01e-38,3;CL:0002543,5.89e-20,6;CL:0005020,5.89e-20,6;CL:0002138,5.89e-20,6;CL:0005022,5.89e-20,6;CL:0002139,1.83e-19,24;CL:0000115,3.64e-13,36;CL:0002078,1.24e-10,45;CL:0000213,2.37e-08,58;CL:0000215,2.37e-08,58;CL:0000071,2.60e-07,18;CL:0002546,2.60e-07,18 | |||
|ontology_enrichment_development_v019=CL:0005022;8.62e-20;6!CL:0002546;2.64e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002171;2.05e-29;1!UBERON:0006518;2.05e-29;1!UBERON:0008949;2.05e-29;1!UBERON:0000101;2.05e-29;1!UBERON:0002167;2.05e-29;1!UBERON:0002066;1.08e-23;5!UBERON:0001473;4.07e-15;8!UBERON:0004536;4.07e-15;8!UBERON:0006558;4.07e-15;8!UBERON:0001638;1.19e-13;9!UBERON:0010260;1.19e-13;9!UBERON:0003920;1.19e-13;9!UBERON:0004582;1.19e-13;9!UBERON:0002465;2.66e-12;10!UBERON:0000055;1.32e-07;65!UBERON:0004638;2.64e-07;18!UBERON:0001986;2.64e-07;18!UBERON:0004852;2.64e-07;18 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!3.42e-12!10;UBERON:0001473!6.20e-12!8;UBERON:0004536!6.20e-12!8;UBERON:0006558!6.20e-12!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.05e-29;1!UBERON:0006518;2.05e-29;1!UBERON:0008949;2.05e-29;1!UBERON:0000101;2.05e-29;1!UBERON:0002167;2.05e-29;1!UBERON:0002066;1.08e-23;5!UBERON:0001473;4.07e-15;8!UBERON:0004536;4.07e-15;8!UBERON:0006558;4.07e-15;8!UBERON:0001638;1.19e-13;9!UBERON:0010260;1.19e-13;9!UBERON:0003920;1.19e-13;9!UBERON:0004582;1.19e-13;9!UBERON:0002465;2.66e-12;10!UBERON:0000055;1.32e-07;65!UBERON:0004638;2.64e-07;18!UBERON:0001986;2.64e-07;18!UBERON:0004852;2.64e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.16e-29,1;UBERON:0006518,3.16e-29,1;UBERON:0008949,3.16e-29,1;UBERON:0000101,3.16e-29,1;UBERON:0002167,3.16e-29,1;UBERON:0002066,1.02e-23,5;UBERON:0001473,3.06e-15,8;UBERON:0004536,3.06e-15,8;UBERON:0006558,3.06e-15,8;UBERON:0001638,1.15e-13,9;UBERON:0010260,1.15e-13,9;UBERON:0003920,1.15e-13,9;UBERON:0004582,1.15e-13,9;UBERON:0002465,2.12e-12,10;UBERON:0004638,2.60e-07,18;UBERON:0001986,2.60e-07,18;UBERON:0004852,2.60e-07,18;UBERON:0000055,3.50e-07,68 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0.516833518338658,0.35576626268671,1.67360306382335,0.402829317109147,0,0.24406205754817,0,0,2.85759130509055,1.34717623575702,0.675668882899933,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0.614481528616916,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0.689486746482929,0,0,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0.31396051279005,0,0.225595660617181,0.392125068635479,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.213574825135389,0.943225830597996,1.24271716604159,0,0,0.243585196761792,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:94607612..94607616,+ | |short_description=p@chr10:94607612..94607616,+ | ||
}} | }} |
Latest revision as of 16:50, 23 July 2015
Short description: | p@chr10:94607612..94607616, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:94607612..94607616, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 1.01e-38 | 3 |
vein endothelial cell | 5.89e-20 | 6 |
lymphangioblast | 5.89e-20 | 6 |
endothelial cell of lymphatic vessel | 5.89e-20 | 6 |
vascular lymphangioblast | 5.89e-20 | 6 |
endothelial cell of vascular tree | 1.83e-19 | 24 |
endothelial cell | 3.64e-13 | 36 |
meso-epithelial cell | 1.24e-10 | 45 |
lining cell | 2.37e-08 | 58 |
barrier cell | 2.37e-08 | 58 |
blood vessel endothelial cell | 2.60e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.16e-29 | 1 |
right lung lobe | 3.16e-29 | 1 |
lower lobe of lung | 3.16e-29 | 1 |
lobe of lung | 3.16e-29 | 1 |
right lung | 3.16e-29 | 1 |
umbilical vein | 1.02e-23 | 5 |
lymphatic vessel | 3.06e-15 | 8 |
lymph vasculature | 3.06e-15 | 8 |
lymphatic part of lymphoid system | 3.06e-15 | 8 |
vein | 1.15e-13 | 9 |
umbilical blood vessel | 1.15e-13 | 9 |
venous blood vessel | 1.15e-13 | 9 |
venous system | 1.15e-13 | 9 |
lymphoid system | 2.12e-12 | 10 |
blood vessel endothelium | 2.60e-07 | 18 |
endothelium | 2.60e-07 | 18 |
cardiovascular system endothelium | 2.60e-07 | 18 |
vessel | 3.50e-07 | 68 |