FFCP PHASE1:Hg19::chr1:157670738..157670753,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115352 | |EntrezGene=115352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18506 | |HGNC=18506 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000292392,uc001frc.1_5end | |association_with_transcript=21bp_to_ENST00000292392,uc001frc.1_5end | ||
|cluster_id=chr1:157670738..157670753,- | |||
|coexpression_cluster_id=C272 | |coexpression_cluster_id=C272 | ||
|description=CAGE_peak_3_at_FCRL3_5end | |description=CAGE_peak_3_at_FCRL3_5end | ||
|id=chr1:157670738..157670753,- | |id=chr1:157670738..157670753,- | ||
|ontology_enrichment_celltype=CL:0000791;3.60e-40;18!CL:0000789;3.60e-40;18!CL:0002419;3.60e-40;18!CL:0000625;2.40e-36;11!CL:0000542;8.15e-33;53!CL:0000236;1.19e-32;13!CL:0000084;7.14e-28;25!CL:0000945;1.70e-19;24!CL:0000898;2.01e-11;3!CL:0000623;1.15e-10;3!CL:0000226;1.73e-10;3!CL:0000842;1.73e-10;3!CL:0000624;1.65e-09;6!CL:0002087;5.52e-09;104!CL:0000815;1.31e-08;2!CL:0000792;1.31e-08;2!CL:0002677;1.31e-08;2 | |ontology_enrichment_celltype=CL:0000838!5.89e-49!52;CL:0000542!7.74e-48!53;CL:0000051!7.74e-48!53;CL:0000791!4.02e-37!18;CL:0000789!4.02e-37!18;CL:0002420!4.02e-37!18;CL:0002419!4.02e-37!18;CL:0000790!4.02e-37!18;CL:0000625!8.21e-27!11;CL:0002087!4.54e-26!119;CL:0000084!2.28e-25!25;CL:0000827!2.28e-25!25;CL:0000738!3.00e-24!140;CL:0000236!4.99e-22!14;CL:0002031!2.30e-20!124;CL:0000945!1.20e-18!24;CL:0000826!1.20e-18!24;CL:0000037!1.61e-17!172;CL:0000566!1.61e-17!172;CL:0000988!6.47e-16!182;CL:0002032!1.57e-15!165;CL:0000837!1.57e-15!165;CL:0000624!2.19e-14!6;CL:0000898!1.11e-08!3;CL:0000623!3.03e-08!3;CL:0000825!3.03e-08!3;CL:0000842!4.08e-08!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;3.60e-40;18!CL:0000789;3.60e-40;18!CL:0002419;3.60e-40;18!CL:0000625;2.40e-36;11!CL:0000542;8.15e-33;53!CL:0000236;1.19e-32;13!CL:0000084;7.14e-28;25!CL:0000945;1.70e-19;24!CL:0000898;2.01e-11;3!CL:0000623;1.15e-10;3!CL:0000226;1.73e-10;3!CL:0000842;1.73e-10;3!CL:0000624;1.65e-09;6!CL:0002087;5.52e-09;104!CL:0000815;1.31e-08;2!CL:0000792;1.31e-08;2!CL:0002677;1.31e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.08e-54,52;CL:0000542,7.52e-53,53;CL:0000051,7.52e-53,53;CL:0000791,3.99e-40,18;CL:0000789,3.99e-40,18;CL:0002420,3.99e-40,18;CL:0002419,3.99e-40,18;CL:0000790,3.99e-40,18;CL:0000625,2.49e-36,11;CL:0000236,3.51e-30,14;CL:0000084,7.69e-28,25;CL:0000827,7.69e-28,25;CL:0002087,8.07e-25,115;CL:0000738,3.71e-21,136;CL:0000945,1.48e-19,24;CL:0000826,1.48e-19,24;CL:0002031,9.47e-19,120;CL:0000037,1.49e-15,168;CL:0000988,2.40e-14,177;CL:0002032,3.87e-13,161;CL:0000837,3.87e-13,161;CL:0000898,2.36e-11,3;CL:0000623,9.41e-11,3;CL:0000825,9.41e-11,3;CL:0000226,1.41e-10,3;CL:0000842,1.41e-10,3;CL:0000624,1.75e-09,6;CL:0000815,1.33e-08,2;CL:0000792,1.33e-08,2;CL:0002677,1.33e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.60e-40;18!CL:0000051;8.15e-33;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;8.28e-30;15!UBERON:0000179;8.28e-30;15!UBERON:0000463;8.28e-30;15!UBERON:0002390;3.05e-14;32!UBERON:0002193;2.13e-10;42 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.03e-21!15;UBERON:0000179!1.03e-21!15;UBERON:0000463!1.03e-21!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.28e-30;15!UBERON:0000179;8.28e-30;15!UBERON:0000463;8.28e-30;15!UBERON:0002390;3.05e-14;32!UBERON:0002193;2.13e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.00e-29,15;UBERON:0000179,1.00e-29,15;UBERON:0000463,1.00e-29,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.464448369948228,0,0,0,0.619737604642413,0.995184627411951,0,0,0,0.651032612147555,0,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3595868907455,19.6609900054367,9.7846017924991,8.53460445133014,8.80871171479227,17.817325638589,17.1871666924064,12.4026988089597,19.9224539188307,2.93618594685469,9.55683070313072,0,0,0,1.57367816091066,0.393010762749165,0.205601498999509,3.51091640320424,12.3850461320764,19.4113600351241,17.534405556712,2.89667187901451,18.8547780783896,22.5964572475294,26.5387786489715,1.0247305578054,0.780356085359269,0,0,0,0,0,0,0,1.14966148080576,4.81078423675682,3.54227568827304,5.41561204350964,5.85975108470777,3.8018081777935,2.71035214339991,7.29523683580185,3.74792179657038,4.73554504088034,7.39015197228942,3.02410114837099,2.13952156626806,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,1.72502059887614,2.43851768931522,0,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.72571360654893,3.94891963872744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,3.0585488285695,3.41788312304498,3.09701308095126,5.34770955012053,1.94541993357815,2.70015718619057,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,4.46549419630756,0,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.657887425858975,1.03132620757723,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.322944549180031,0,0,0,0,0,0,1.75115337837928,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.464448369948228,0,0,0,0.619737604642413,0.995184627411951,0,0,0,0.651032612147555,0,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3595868907455,19.6609900054367,9.7846017924991,8.53460445133014,8.80871171479227,17.817325638589,17.1871666924064,12.4026988089597,19.9224539188307,2.93618594685469,9.55683070313072,0,0,0,1.57367816091066,0.393010762749165,0.205601498999509,3.51091640320424,12.3850461320764,19.4113600351241,17.534405556712,2.89667187901451,18.8547780783896,22.5964572475294,26.5387786489715,1.0247305578054,0.780356085359269,0,0,0,0,0,0,0,1.14966148080576,4.81078423675682,3.54227568827304,5.41561204350964,5.85975108470777,3.8018081777935,2.71035214339991,7.29523683580185,3.74792179657038,4.73554504088034,7.39015197228942,3.02410114837099,2.13952156626806,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,1.72502059887614,2.43851768931522,0,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.72571360654893,3.94891963872744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,3.0585488285695,3.41788312304498,3.09701308095126,5.34770955012053,1.94541993357815,2.70015718619057,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,4.46549419630756,0,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.657887425858975,1.03132620757723,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.322944549180031,0,0,0,0,0,0,1.75115337837928,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | ||
|short_description=p3@FCRL3 | |short_description=p3@FCRL3 | ||
}} | }} |
Latest revision as of 19:27, 17 September 2015
Short description: | p3@FCRL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FCRL3_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | 21bp_to_ENST00000292392, uc001frc.1_5end |
EntrezGene: | FCRL3 |
HGNC: | 18506 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.08e-54 | 52 |
lymphocyte | 7.52e-53 | 53 |
common lymphoid progenitor | 7.52e-53 | 53 |
mature alpha-beta T cell | 3.99e-40 | 18 |
alpha-beta T cell | 3.99e-40 | 18 |
immature T cell | 3.99e-40 | 18 |
mature T cell | 3.99e-40 | 18 |
immature alpha-beta T cell | 3.99e-40 | 18 |
CD8-positive, alpha-beta T cell | 2.49e-36 | 11 |
B cell | 3.51e-30 | 14 |
T cell | 7.69e-28 | 25 |
pro-T cell | 7.69e-28 | 25 |
nongranular leukocyte | 8.07e-25 | 115 |
leukocyte | 3.71e-21 | 136 |
lymphocyte of B lineage | 1.48e-19 | 24 |
pro-B cell | 1.48e-19 | 24 |
hematopoietic lineage restricted progenitor cell | 9.47e-19 | 120 |
hematopoietic stem cell | 1.49e-15 | 168 |
hematopoietic cell | 2.40e-14 | 177 |
hematopoietic oligopotent progenitor cell | 3.87e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.87e-13 | 161 |
naive T cell | 2.36e-11 | 3 |
natural killer cell | 9.41e-11 | 3 |
pro-NK cell | 9.41e-11 | 3 |
single nucleate cell | 1.41e-10 | 3 |
mononuclear cell | 1.41e-10 | 3 |
CD4-positive, alpha-beta T cell | 1.75e-09 | 6 |
regulatory T cell | 1.33e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.33e-08 | 2 |
naive regulatory T cell | 1.33e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.00e-29 | 15 |
haemolymphatic fluid | 1.00e-29 | 15 |
organism substance | 1.00e-29 | 15 |