FFCP PHASE1:Hg19::chr17:25904469..25904479,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8844 | |EntrezGene=8844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6465 | |HGNC=6465 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-77bp_to_BC167812_5end | |association_with_transcript=-77bp_to_BC167812_5end | ||
|cluster_id=chr17:25904469..25904479,+ | |||
|coexpression_cluster_id=C134 | |coexpression_cluster_id=C134 | ||
|description=CAGE_peak_12_at_KSR1_5end | |description=CAGE_peak_12_at_KSR1_5end | ||
|id=chr17:25904469..25904479,+ | |id=chr17:25904469..25904479,+ | ||
|ontology_enrichment_celltype=CL:0002575;3.34e-11;2!CL:0000188;8.09e-10;9!CL:0002541;6.78e-08;3 | |ontology_enrichment_celltype=CL:0002541!6.55e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002575;3.34e-11;2!CL:0000188;8.09e-10;9!CL:0002541;6.78e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002575,4.09e-11,2;CL:0000188,8.46e-10,9;CL:0002541,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.34e-11;2!UBERON:0010056;3.34e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001134;3.24e-31;16!UBERON:0002036;3.24e-31;16!UBERON:0001723;3.56e-27;3!UBERON:0001033;3.56e-27;3!UBERON:0002426;5.16e-21;1!UBERON:0003831;5.16e-21;1!UBERON:0003898;5.16e-21;1!UBERON:0004830;5.16e-21;1!UBERON:0003830;5.16e-21;1!UBERON:0005175;5.16e-21;1!UBERON:0001774;5.16e-21;1!UBERON:0001103;5.16e-21;1!UBERON:0002385;3.39e-16;31!UBERON:0001015;3.39e-16;31!UBERON:0000383;3.39e-16;31!UBERON:0000341;3.34e-11;2!UBERON:0005090;3.34e-11;2!UBERON:0001630;3.34e-11;2!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!3.32e-10!2;UBERON:0005090!3.32e-10!2;UBERON:0000341!3.63e-10!2;UBERON:0001723!3.97e-07!3;UBERON:0001033!3.97e-07!3;UBERON:0010056!3.97e-07!3;UBERON:0000476!6.55e-07!3;UBERON:0000920!6.55e-07!3;UBERON:0006947!8.76e-07!3;UBERON:0004054!8.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.24e-31;16!UBERON:0002036;3.24e-31;16!UBERON:0001723;3.56e-27;3!UBERON:0001033;3.56e-27;3!UBERON:0002426;5.16e-21;1!UBERON:0003831;5.16e-21;1!UBERON:0003898;5.16e-21;1!UBERON:0004830;5.16e-21;1!UBERON:0003830;5.16e-21;1!UBERON:0005175;5.16e-21;1!UBERON:0001774;5.16e-21;1!UBERON:0001103;5.16e-21;1!UBERON:0002385;3.39e-16;31!UBERON:0001015;3.39e-16;31!UBERON:0000383;3.39e-16;31!UBERON:0000341;3.34e-11;2!UBERON:0005090;3.34e-11;2!UBERON:0001630;3.34e-11;2!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.65e-27,3;UBERON:0001033,4.65e-27,3;UBERON:0010056,4.65e-27,3;UBERON:0002426,2.82e-21,1;UBERON:0003831,2.82e-21,1;UBERON:0003898,2.82e-21,1;UBERON:0004830,2.82e-21,1;UBERON:0003830,2.82e-21,1;UBERON:0005175,2.82e-21,1;UBERON:0001774,2.82e-21,1;UBERON:0001103,2.82e-21,1;UBERON:0010084,2.82e-21,1;UBERON:0005090,2.47e-11,2;UBERON:0001630,2.47e-11,2;UBERON:0000341,3.35e-11,2;UBERON:0001042,7.96e-09,10;UBERON:0009145,7.96e-09,10;UBERON:0001134,3.44e-08,62;UBERON:0002036,3.44e-08,62;UBERON:0003082,3.44e-08,62;UBERON:0006562,4.18e-08,11;UBERON:0000920,5.93e-08,3;UBERON:0002385,6.18e-08,64;UBERON:0001015,6.18e-08,64;UBERON:0000383,6.18e-08,64;UBERON:0002329,3.72e-07,71;UBERON:0003059,3.72e-07,71;UBERON:0007282,3.72e-07,71;UBERON:0004290,3.72e-07,71;UBERON:0009618,3.72e-07,71;UBERON:0003077,4.67e-07,72;UBERON:0007285,4.67e-07,72;UBERON:0007524,5.83e-07,73 | |||
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| ||
|short_description=p12@KSR1 | |short_description=p12@KSR1 | ||
}} | }} |
Latest revision as of 04:08, 19 September 2015
Short description: | p12@KSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KSR1_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | -77bp_to_BC167812_5end |
EntrezGene: | KSR1 |
HGNC: | 6465 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 4.09e-11 | 2 |
cell of skeletal muscle | 8.46e-10 | 9 |
chorionic membrane mesenchymal stem cell | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.65e-27 | 3 |
gustatory system | 4.65e-27 | 3 |
future tongue | 4.65e-27 | 3 |
chest muscle | 2.82e-21 | 1 |
respiratory system muscle | 2.82e-21 | 1 |
skeletal muscle of trunk | 2.82e-21 | 1 |
respiratory system skeletal muscle | 2.82e-21 | 1 |
thoracic segment muscle | 2.82e-21 | 1 |
chest organ | 2.82e-21 | 1 |
muscle of trunk | 2.82e-21 | 1 |
diaphragm | 2.82e-21 | 1 |
future diaphragm | 2.82e-21 | 1 |
muscle structure | 2.47e-11 | 2 |
muscle organ | 2.47e-11 | 2 |
throat | 3.35e-11 | 2 |
chordate pharynx | 7.96e-09 | 10 |
pharyngeal region of foregut | 7.96e-09 | 10 |
skeletal muscle tissue | 3.44e-08 | 62 |
striated muscle tissue | 3.44e-08 | 62 |
myotome | 3.44e-08 | 62 |
pharynx | 4.18e-08 | 11 |
egg chorion | 5.93e-08 | 3 |
muscle tissue | 6.18e-08 | 64 |
musculature | 6.18e-08 | 64 |
musculature of body | 6.18e-08 | 64 |
somite | 3.72e-07 | 71 |
presomitic mesoderm | 3.72e-07 | 71 |
presumptive segmental plate | 3.72e-07 | 71 |
dermomyotome | 3.72e-07 | 71 |
trunk paraxial mesoderm | 3.72e-07 | 71 |
paraxial mesoderm | 4.67e-07 | 72 |
presumptive paraxial mesoderm | 4.67e-07 | 72 |
dense mesenchyme tissue | 5.83e-07 | 73 |