FFCP PHASE1:Hg19::chr8:95653478..95653491,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54845 | |EntrezGene=54845 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25966 | |HGNC=25966 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_ENST00000454170_5end | |association_with_transcript=51bp_to_ENST00000454170_5end | ||
|cluster_id=chr8:95653478..95653491,+ | |||
|coexpression_cluster_id=C2933 | |coexpression_cluster_id=C2933 | ||
|description=CAGE_peak_4_at_ESRP1_5end | |description=CAGE_peak_4_at_ESRP1_5end | ||
|id=chr8:95653478..95653491,+ | |id=chr8:95653478..95653491,+ | ||
|ontology_enrichment_celltype=CL:0002076;4.25e-22;42!CL:0000039;7.88e-16;7!CL:0000586;7.88e-16;7!CL:0002251;2.76e-12;20!CL:0002322;1.09e-11;5!CL:0002368;1.45e-11;13!CL:0002231;3.81e-07;3!CL:0000082;4.07e-07;19!CL:0000307;5.00e-07;3 | |ontology_enrichment_celltype=CL:0000066!1.05e-33!254;CL:0002076!3.96e-25!43;CL:0000223!1.90e-19!59;CL:0002251!2.65e-12!21;CL:0002368!7.11e-11!13;CL:0000039!1.62e-10!7;CL:0000586!1.62e-10!7;CL:0002159!4.97e-09!13;CL:0002322!5.21e-08!5;CL:0002077!7.17e-07!33 | ||
| | |ontology_enrichment_celltype_v019=CL:0002076;4.25e-22;42!CL:0000039;7.88e-16;7!CL:0000586;7.88e-16;7!CL:0002251;2.76e-12;20!CL:0002322;1.09e-11;5!CL:0002368;1.45e-11;13!CL:0002231;3.81e-07;3!CL:0000082;4.07e-07;19!CL:0000307;5.00e-07;3 | ||
|ontology_enrichment_disease=DOID:1749;1.30e-21;14!DOID:299;5.44e-13;25!DOID:305;1.06e-10;106!DOID:0050615;5.54e-07;16 | |ontology_enrichment_celltype_v019_2=CL:0000066,1.41e-34,253;CL:0002076,1.16e-28,42;CL:0000223,5.10e-24,58;CL:0000039,1.36e-15,7;CL:0000586,1.36e-15,7;CL:0002251,2.45e-12,20;CL:0002322,1.14e-11,5;CL:0002368,1.15e-11,13;CL:0002231,3.30e-07,3;CL:0000082,3.42e-07,19;CL:0000068,5.92e-07,3;CL:0000069,5.92e-07,3;CL:0000307,5.92e-07,3;CL:0000377,5.92e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0003343;2.25e-08;4!UBERON:0004785;2.25e-08;4!UBERON:0000344;3.17e-08;20!UBERON:0005911;3.42e-08;36!UBERON:0005178;5.44e-08;34!UBERON:0002224;5.44e-08;34!UBERON:0005181;1.82e-07;35!UBERON:0004807;2.51e-07;22!UBERON:0000065;3.10e-07;44!UBERON:0002048;3.15e-07;22!UBERON:0000117;3.15e-07;22!UBERON:0000171;3.15e-07;22!UBERON:0000170;3.15e-07;22!UBERON:0004802;4.07e-07;19!UBERON:0000115;4.07e-07;19 | |ontology_enrichment_development_v019=CL:0000223;6.85e-13;58!UBERON:0009117;8.57e-08;10!UBERON:0005564;8.57e-08;10!CL:0000377;5.00e-07;3 | ||
|ontology_enrichment_disease=DOID:305!9.17e-26!106;DOID:0050687!9.65e-19!143;DOID:1749!1.57e-16!14;DOID:299!6.39e-10!25;DOID:162!3.56e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.30e-21;14!DOID:299;5.44e-13;25!DOID:305;1.06e-10;106!DOID:0050615;5.54e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.21e-32,106;DOID:0050687,3.18e-25,143;DOID:1749,8.15e-22,14;DOID:299,6.13e-13,25;DOID:162,1.46e-12,235;DOID:14566,5.19e-12,239;DOID:0050615,5.51e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.28e-20!169;UBERON:0000925!2.28e-20!169;UBERON:0006595!2.28e-20!169;UBERON:0001007!3.16e-16!155;UBERON:0001555!3.16e-16!155;UBERON:0007026!3.16e-16!155;UBERON:0001004!2.67e-14!72;UBERON:0004921!1.08e-13!129;UBERON:0004185!1.08e-13!129;UBERON:0005153!2.33e-13!37;UBERON:0000077!8.04e-13!130;UBERON:0000464!1.60e-12!104;UBERON:0000065!3.57e-11!53;UBERON:0005178!4.35e-11!34;UBERON:0002224!4.35e-11!34;UBERON:0000466!7.22e-11!126;UBERON:0005181!1.36e-10!35;UBERON:0005911!3.63e-10!82;UBERON:0000344!1.08e-09!12;UBERON:0000161!1.32e-09!35;UBERON:0000915!1.46e-09!52;UBERON:0005157!1.88e-09!51;UBERON:0002048!2.65e-08!22;UBERON:0000117!2.65e-08!22;UBERON:0000171!2.65e-08!22;UBERON:0000170!2.65e-08!22;UBERON:0005597!2.65e-08!22;UBERON:0000118!2.65e-08!22;UBERON:0005156!7.75e-08!59;UBERON:0000990!7.75e-08!59;UBERON:0008947!2.80e-07!38;UBERON:0003258!2.80e-07!38;UBERON:0001041!3.19e-07!98;UBERON:0003729!5.36e-07!5;UBERON:0000166!8.66e-07!21;UBERON:0001046!9.87e-07!19;UBERON:0000072!9.96e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.25e-08;4!UBERON:0004785;2.25e-08;4!UBERON:0000344;3.17e-08;20!UBERON:0005911;3.42e-08;36!UBERON:0005178;5.44e-08;34!UBERON:0002224;5.44e-08;34!UBERON:0005181;1.82e-07;35!UBERON:0004807;2.51e-07;22!UBERON:0000065;3.10e-07;44!UBERON:0002048;3.15e-07;22!UBERON:0000117;3.15e-07;22!UBERON:0000171;3.15e-07;22!UBERON:0000170;3.15e-07;22!UBERON:0004802;4.07e-07;19!UBERON:0000115;4.07e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.98e-13,160;UBERON:0000925,3.98e-13,160;UBERON:0006595,3.98e-13,160;UBERON:0005153,1.55e-11,37;UBERON:0001007,2.32e-10,145;UBERON:0001555,2.32e-10,145;UBERON:0007026,2.32e-10,145;UBERON:0001004,2.54e-10,74;UBERON:0000065,6.99e-10,54;UBERON:0004921,1.53e-09,118;UBERON:0005157,3.11e-09,47;UBERON:0005911,1.32e-08,82;UBERON:0005178,2.05e-08,34;UBERON:0002224,2.05e-08,34;UBERON:0003343,2.07e-08,4;UBERON:0004785,2.07e-08,4;UBERON:0000344,2.68e-08,20;UBERON:0005181,4.42e-08,35;UBERON:0002048,2.85e-07,22;UBERON:0000117,2.85e-07,22;UBERON:0000171,2.85e-07,22;UBERON:0000170,2.85e-07,22;UBERON:0005597,2.85e-07,22;UBERON:0000118,2.85e-07,22;UBERON:0000915,3.09e-07,52;UBERON:0004802,3.42e-07,19;UBERON:0000115,3.42e-07,19 | |||
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| ||
|short_description=p4@ESRP1 | |short_description=p4@ESRP1 | ||
}} | }} |
Latest revision as of 13:08, 19 September 2015
Short description: | p4@ESRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ESRP1_5end |
Coexpression cluster: | C2933_testicular_rectal_squamous_malignant_nasal_small_large |
Association with transcript: | 51bp_to_ENST00000454170_5end |
EntrezGene: | ESRP1 |
HGNC: | 25966 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.41e-34 | 253 |
endo-epithelial cell | 1.16e-28 | 42 |
endodermal cell | 5.10e-24 | 58 |
germ line cell | 1.36e-15 | 7 |
germ cell | 1.36e-15 | 7 |
epithelial cell of alimentary canal | 2.45e-12 | 20 |
embryonic stem cell | 1.14e-11 | 5 |
respiratory epithelial cell | 1.15e-11 | 13 |
epithelial cell of prostate | 3.30e-07 | 3 |
epithelial cell of lung | 3.42e-07 | 19 |
duct epithelial cell | 5.92e-07 | 3 |
branched duct epithelial cell | 5.92e-07 | 3 |
tracheal epithelial cell | 5.92e-07 | 3 |
tracheoblast | 5.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.98e-13 | 160 |
endoderm | 3.98e-13 | 160 |
presumptive endoderm | 3.98e-13 | 160 |
epithelial bud | 1.55e-11 | 37 |
digestive system | 2.32e-10 | 145 |
digestive tract | 2.32e-10 | 145 |
primitive gut | 2.32e-10 | 145 |
respiratory system | 2.54e-10 | 74 |
respiratory tract | 6.99e-10 | 54 |
subdivision of digestive tract | 1.53e-09 | 118 |
epithelial fold | 3.11e-09 | 47 |
endo-epithelium | 1.32e-08 | 82 |
thoracic cavity element | 2.05e-08 | 34 |
thoracic cavity | 2.05e-08 | 34 |
mucosa of oral region | 2.07e-08 | 4 |
respiratory system mucosa | 2.07e-08 | 4 |
mucosa | 2.68e-08 | 20 |
thoracic segment organ | 4.42e-08 | 35 |
lung | 2.85e-07 | 22 |
respiratory tube | 2.85e-07 | 22 |
respiration organ | 2.85e-07 | 22 |
pair of lungs | 2.85e-07 | 22 |
lung primordium | 2.85e-07 | 22 |
lung bud | 2.85e-07 | 22 |
thoracic segment of trunk | 3.09e-07 | 52 |
respiratory tract epithelium | 3.42e-07 | 19 |
lung epithelium | 3.42e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.21e-32 | 106 |
cell type cancer | 3.18e-25 | 143 |
squamous cell carcinoma | 8.15e-22 | 14 |
adenocarcinoma | 6.13e-13 | 25 |
cancer | 1.46e-12 | 235 |
disease of cellular proliferation | 5.19e-12 | 239 |
respiratory system cancer | 5.51e-07 | 16 |