FFCP PHASE1:Hg19::chr17:79061332..79061350,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79061332..79061350,+ | |||
|description=CAGE_peak_at_chr17:79061332..79061350,+ | |description=CAGE_peak_at_chr17:79061332..79061350,+ | ||
|id=chr17:79061332..79061350,+ | |id=chr17:79061332..79061350,+ | ||
|ontology_enrichment_celltype=CL:0002252;6.31e-21;1!CL:0001014;3.70e-11;2!CL:0001016;3.70e-11;2 | |ontology_enrichment_celltype=CL:0002076!2.29e-17!43;CL:0002251!6.11e-13!21;CL:0000223!1.13e-12!59;CL:0002368!4.89e-12!13;CL:0002621!8.62e-09!3;CL:0002202!1.92e-07!9;CL:0002632!1.92e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0002252;6.31e-21;1!CL:0001014;3.70e-11;2!CL:0001016;3.70e-11;2 | ||
|ontology_enrichment_disease=DOID:3151;2.82e-21;1!DOID:3149;2.82e-21;1!DOID:3451;2.47e-11;2!DOID:4159;2.47e-11;2!DOID:0060122;2.47e-11;2 | |ontology_enrichment_celltype_v019_2=CL:0002252,9.43e-21,1;CL:0001014,3.35e-11,2;CL:0001016,3.35e-11,2 | ||
|ontology_enrichment_uberon=UBERON:0003127;2.46e-40;2!UBERON:0002372;1.53e-21;1!UBERON:0001961;1.53e-21;1!UBERON:0001744;1.53e-21;1!UBERON:0001042;1.53e-21;1!UBERON:0001735;1.53e-21;1!UBERON:0000974;3.48e-14;6!UBERON:0003126;2.66e-12;7!UBERON:0001005;2.66e-12;7!UBERON:0006562;1.82e-11;2!UBERON:0000341;2.47e-11;2!UBERON:0001723;4.84e-08;3!UBERON:0001033;4.84e-08;3!UBERON:0001043;7.26e-08;3!UBERON:0000165;4.63e-07;28 | |ontology_enrichment_development_v019=UBERON:0008814;2.02e-11;2!UBERON:0010056;2.02e-11;2 | ||
|ontology_enrichment_disease=DOID:1749!5.17e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.82e-21;1!DOID:3149;2.82e-21;1!DOID:3451;2.47e-11;2!DOID:4159;2.47e-11;2!DOID:0060122;2.47e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.45e-21,1;DOID:3149,3.45e-21,1;DOID:3451,2.73e-11,2;DOID:4159,2.73e-11,2;DOID:0060122,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!6.49e-18!72;UBERON:0000974!1.50e-15!10;UBERON:0004119!3.15e-15!169;UBERON:0000925!3.15e-15!169;UBERON:0006595!3.15e-15!169;UBERON:0000065!9.73e-15!53;UBERON:0003729!2.84e-13!5;UBERON:0001007!2.88e-12!155;UBERON:0001555!2.88e-12!155;UBERON:0007026!2.88e-12!155;UBERON:0000166!5.67e-11!21;UBERON:0003343!8.46e-11!4;UBERON:0004785!8.46e-11!4;UBERON:0006562!1.02e-10!11;UBERON:0005178!1.60e-10!34;UBERON:0002224!1.60e-10!34;UBERON:0005181!3.93e-10!35;UBERON:0000344!6.53e-10!12;UBERON:0000165!2.00e-09!28;UBERON:0000930!2.00e-09!28;UBERON:0001041!3.93e-09!98;UBERON:0007196!6.49e-09!14;UBERON:0001558!6.49e-09!14;UBERON:0001042!7.35e-09!10;UBERON:0009145!7.35e-09!10;UBERON:0001949!8.62e-09!3;UBERON:0001723!1.31e-08!3;UBERON:0001033!1.31e-08!3;UBERON:0010056!1.31e-08!3;UBERON:0000077!2.14e-08!130;UBERON:0004921!2.25e-08!129;UBERON:0004185!2.25e-08!129;UBERON:0000161!2.40e-08!35;UBERON:0000072!3.94e-08!46;UBERON:0000153!2.67e-07!129;UBERON:0007811!2.67e-07!129;UBERON:0003127!5.33e-07!2;UBERON:0000475!7.34e-07!365;UBERON:0000341!9.56e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.46e-40;2!UBERON:0002372;1.53e-21;1!UBERON:0001961;1.53e-21;1!UBERON:0001744;1.53e-21;1!UBERON:0001042;1.53e-21;1!UBERON:0001735;1.53e-21;1!UBERON:0000974;3.48e-14;6!UBERON:0003126;2.66e-12;7!UBERON:0001005;2.66e-12;7!UBERON:0006562;1.82e-11;2!UBERON:0000341;2.47e-11;2!UBERON:0001723;4.84e-08;3!UBERON:0001033;4.84e-08;3!UBERON:0001043;7.26e-08;3!UBERON:0000165;4.63e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.01e-40,2;UBERON:0002372,1.53e-21,1;UBERON:0001961,1.53e-21,1;UBERON:0001744,1.53e-21,1;UBERON:0001735,1.53e-21,1;UBERON:0003126,2.51e-12,7;UBERON:0001005,2.51e-12,7;UBERON:0000341,2.47e-11,2;UBERON:0001042,4.75e-09,10;UBERON:0009145,4.75e-09,10;UBERON:0000974,6.28e-09,10;UBERON:0000166,7.41e-09,22;UBERON:0006562,2.62e-08,11;UBERON:0001041,3.93e-08,87;UBERON:0001723,4.84e-08,3;UBERON:0001033,4.84e-08,3;UBERON:0010056,4.84e-08,3;UBERON:0001043,8.29e-08,3;UBERON:0009143,8.29e-08,3;UBERON:0000072,3.63e-07,47;UBERON:0001004,7.43e-07,74;UBERON:0000165,7.47e-07,29;UBERON:0000930,7.47e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.402115889646523,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0.885741385813839,0,0,0,0,0,0,0.557694977114413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0.0870592065804026,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,1.5476039091159,0.182248669974074,2.0126081255956,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0.196295437002051,0.471878893390961,1.83428598521679,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0.295712172434091,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55880778281177,0.476128862927481,0.129177819672012,0.124149428591716,0,0,0,3.70118471424834,0.342233301085281,5.18610808212324,2.94061042109973,1.33064142618405,0.0814032686109745,0,0,0,0,0.122241444182866,0.813792356631477,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.402115889646523,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0.885741385813839,0,0,0,0,0,0,0.557694977114413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0.0870592065804026,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,1.5476039091159,0.182248669974074,2.0126081255956,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0.196295437002051,0.471878893390961,1.83428598521679,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0.295712172434091,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55880778281177,0.476128862927481,0.129177819672012,0.124149428591716,0,0,0,3.70118471424834,0.342233301085281,5.18610808212324,2.94061042109973,1.33064142618405,0.0814032686109745,0,0,0,0,0.122241444182866,0.813792356631477,0.665756774185513,0,0 | ||
|short_description=p@chr17:79061332..79061350,+ | |short_description=p@chr17:79061332..79061350,+ | ||
}} | }} |
Latest revision as of 22:36, 25 July 2015
Short description: | p@chr17:79061332..79061350, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79061332..79061350, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 9.43e-21 | 1 |
CD1a-positive Langerhans cell | 3.35e-11 | 2 |
immature CD1a-positive Langerhans cell | 3.35e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.01e-40 | 2 |
tonsil | 1.53e-21 | 1 |
mucosa-associated lymphoid tissue | 1.53e-21 | 1 |
lymphoid tissue | 1.53e-21 | 1 |
tonsillar ring | 1.53e-21 | 1 |
trachea | 2.51e-12 | 7 |
respiratory airway | 2.51e-12 | 7 |
throat | 2.47e-11 | 2 |
chordate pharynx | 4.75e-09 | 10 |
pharyngeal region of foregut | 4.75e-09 | 10 |
neck | 6.28e-09 | 10 |
oral opening | 7.41e-09 | 22 |
pharynx | 2.62e-08 | 11 |
foregut | 3.93e-08 | 87 |
tongue | 4.84e-08 | 3 |
gustatory system | 4.84e-08 | 3 |
future tongue | 4.84e-08 | 3 |
esophagus | 8.29e-08 | 3 |
esophageal region | 8.29e-08 | 3 |
segment of respiratory tract | 3.63e-07 | 47 |
respiratory system | 7.43e-07 | 74 |
mouth | 7.47e-07 | 29 |
stomodeum | 7.47e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.45e-21 | 1 |
keratoacanthoma | 3.45e-21 | 1 |
skin carcinoma | 2.73e-11 | 2 |
skin cancer | 2.73e-11 | 2 |
integumentary system cancer | 2.73e-11 | 2 |