FFCP PHASE1:Hg19::chr19:16023475..16023478,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:16023475..16023478,- | |||
|coexpression_cluster_id=C326 | |coexpression_cluster_id=C326 | ||
|description=CAGE_peak_at_chr19:16023475..16023478,- | |description=CAGE_peak_at_chr19:16023475..16023478,- | ||
|id=chr19:16023475..16023478,- | |id=chr19:16023475..16023478,- | ||
|ontology_enrichment_celltype=CL:0000082;5.83e-08;19 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000082;5.83e-08;19 | ||
|ontology_enrichment_disease=DOID:1324;7.92e-10;15!DOID:0050615;2.83e-09;16 | |ontology_enrichment_celltype_v019_2=CL:0000082,5.73e-08,19 | ||
|ontology_enrichment_uberon=UBERON:0002394;1.12e-09;4!UBERON:0003928;1.12e-09;4!UBERON:0004802;5.83e-08;19!UBERON:0000115;5.83e-08;19!UBERON:0002048;5.32e-07;22!UBERON:0004807;5.32e-07;22!UBERON:0000117;5.32e-07;22!UBERON:0000171;5.32e-07;22!UBERON:0000170;5.32e-07;22 | |ontology_enrichment_development_v019=UBERON:0001041;1.04e-10;30 | ||
|ontology_enrichment_disease=DOID:4929!1.05e-09!2;DOID:305!3.33e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1324;7.92e-10;15!DOID:0050615;2.83e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,7.75e-10,15;DOID:0050615,2.77e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0009497!7.95e-10!25;UBERON:0000015!7.95e-10!25;UBERON:0002423!7.95e-10!25;UBERON:0006235!7.95e-10!25;UBERON:0004161!7.95e-10!25;UBERON:0001897!1.10e-09!2;UBERON:0008835!9.92e-09!22;UBERON:0003894!9.92e-09!22;UBERON:0009854!2.61e-08!23;UBERON:0007499!1.44e-07!25;UBERON:0009856!3.06e-07!26;UBERON:0001017!6.18e-07!82;UBERON:0001049!9.16e-07!57;UBERON:0005068!9.16e-07!57;UBERON:0006241!9.16e-07!57;UBERON:0007135!9.16e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.12e-09;4!UBERON:0003928;1.12e-09;4!UBERON:0004802;5.83e-08;19!UBERON:0000115;5.83e-08;19!UBERON:0002048;5.32e-07;22!UBERON:0004807;5.32e-07;22!UBERON:0000117;5.32e-07;22!UBERON:0000171;5.32e-07;22!UBERON:0000170;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,5.73e-08,19;UBERON:0000115,5.73e-08,19;UBERON:0008835,4.94e-07,22;UBERON:0003894,4.94e-07,22;UBERON:0005911,5.11e-07,82;UBERON:0002048,5.24e-07,22;UBERON:0000117,5.24e-07,22;UBERON:0000171,5.24e-07,22;UBERON:0000170,5.24e-07,22;UBERON:0005597,5.24e-07,22;UBERON:0000118,5.24e-07,22;UBERON:0002394,7.17e-07,6;UBERON:0003928,7.17e-07,6;UBERON:0009854,9.13e-07,23 | |||
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| ||
|short_description=p@chr19:16023475..16023478,- | |short_description=p@chr19:16023475..16023478,- | ||
}} | }} |
Latest revision as of 04:38, 26 July 2015
Short description: | p@chr19:16023475..16023478, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:16023475..16023478, - |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 5.73e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 5.73e-08 | 19 |
lung epithelium | 5.73e-08 | 19 |
hepatic diverticulum | 4.94e-07 | 22 |
liver primordium | 4.94e-07 | 22 |
endo-epithelium | 5.11e-07 | 82 |
lung | 5.24e-07 | 22 |
respiratory tube | 5.24e-07 | 22 |
respiration organ | 5.24e-07 | 22 |
pair of lungs | 5.24e-07 | 22 |
lung primordium | 5.24e-07 | 22 |
lung bud | 5.24e-07 | 22 |
bile duct | 7.17e-07 | 6 |
digestive system duct | 7.17e-07 | 6 |
digestive tract diverticulum | 9.13e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 7.75e-10 | 15 |
respiratory system cancer | 2.77e-09 | 16 |