FFCP PHASE1:Hg19::chr15:96875657..96875760,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7026 | |EntrezGene=7026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7976 | |HGNC=7976 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000559679_5end | |association_with_transcript=-5bp_to_ENST00000559679_5end | ||
|cluster_id=chr15:96875657..96875760,+ | |||
|description=CAGE_peak_14_at_NR2F2_5end | |description=CAGE_peak_14_at_NR2F2_5end | ||
|id=chr15:96875657..96875760,+ | |id=chr15:96875657..96875760,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000066!2.59e-20!254;CL:0000220!5.24e-07!246;CL:0002251!7.86e-07!21;CL:0000076!8.15e-07!62 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:1749;1.59e-08;14 | |ontology_enrichment_celltype_v019_2=CL:0000066,5.59e-17,253;CL:0000076,2.27e-07,63 | ||
|ontology_enrichment_uberon=UBERON:0001737;5.84e-08;9!UBERON:0001557;5.84e-08;9!UBERON:0001004;2.54e-07;65 | |ontology_enrichment_development_v019=UBERON:0008947;4.62e-10;29 | ||
|ontology_enrichment_disease=DOID:0050687!1.72e-21!143;DOID:305!1.65e-16!106;DOID:14566!1.17e-13!239;DOID:162!3.27e-12!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.59e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.81e-20,143;DOID:305,3.39e-16,106;DOID:14566,9.42e-15,239;DOID:162,5.13e-13,235;DOID:1749,1.46e-08,14;DOID:0050615,8.59e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001007!6.32e-17!155;UBERON:0001555!6.32e-17!155;UBERON:0007026!6.32e-17!155;UBERON:0004119!7.63e-17!169;UBERON:0000925!7.63e-17!169;UBERON:0006595!7.63e-17!169;UBERON:0000481!1.33e-13!347;UBERON:0000077!1.90e-13!130;UBERON:0003104!3.35e-13!238;UBERON:0009142!3.35e-13!238;UBERON:0004921!1.05e-12!129;UBERON:0004185!1.05e-12!129;UBERON:0001041!5.15e-12!98;UBERON:0001004!6.40e-12!72;UBERON:0000475!2.99e-09!365;UBERON:0002100!4.58e-09!216;UBERON:0000477!2.74e-08!286;UBERON:0008947!3.36e-08!38;UBERON:0003258!3.36e-08!38;UBERON:0001048!4.66e-08!168;UBERON:0009569!1.60e-07!113;UBERON:0000072!2.65e-07!46;UBERON:0000483!3.11e-07!309;UBERON:0000119!3.88e-07!312;UBERON:0000466!4.28e-07!126;UBERON:0000915!6.11e-07!52;UBERON:0000065!6.88e-07!53;UBERON:0000468!7.58e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.84e-08;9!UBERON:0001557;5.84e-08;9!UBERON:0001004;2.54e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.33e-10,74;UBERON:0001007,5.09e-09,145;UBERON:0001555,5.09e-09,145;UBERON:0007026,5.09e-09,145;UBERON:0004119,1.41e-08,160;UBERON:0000925,1.41e-08,160;UBERON:0006595,1.41e-08,160;UBERON:0001737,3.18e-08,9;UBERON:0001041,3.55e-07,87;UBERON:0008947,4.00e-07,38;UBERON:0003258,4.00e-07,38;UBERON:0000072,8.63e-07,47 | |||
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| ||
|short_description=p14@NR2F2 | |short_description=p14@NR2F2 | ||
}} | }} |
Latest revision as of 01:29, 20 September 2015
Short description: | p14@NR2F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_NR2F2_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000559679_5end |
EntrezGene: | NR2F2 |
HGNC: | 7976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.59e-17 | 253 |
squamous epithelial cell | 2.27e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.33e-10 | 74 |
digestive system | 5.09e-09 | 145 |
digestive tract | 5.09e-09 | 145 |
primitive gut | 5.09e-09 | 145 |
endoderm-derived structure | 1.41e-08 | 160 |
endoderm | 1.41e-08 | 160 |
presumptive endoderm | 1.41e-08 | 160 |
larynx | 3.18e-08 | 9 |
foregut | 3.55e-07 | 87 |
respiratory primordium | 4.00e-07 | 38 |
endoderm of foregut | 4.00e-07 | 38 |
segment of respiratory tract | 8.63e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.81e-20 | 143 |
carcinoma | 3.39e-16 | 106 |
disease of cellular proliferation | 9.42e-15 | 239 |
cancer | 5.13e-13 | 235 |
squamous cell carcinoma | 1.46e-08 | 14 |
respiratory system cancer | 8.59e-07 | 16 |