FFCP PHASE1:Hg19::chr1:152386747..152386752,-: Difference between revisions
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|id=chr1:152386747..152386752,-
|short_description=p2@CRNN
|description=CAGE_peak_2_at_CRNN_5end
|association_with_transcript=0bp_to_NM_016190,uc001ezx.2_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=49860 | |EntrezGene=49860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1230 | |HGNC=1230 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBG3 | |UniProt=Q9UBG3 | ||
|association_with_transcript=0bp_to_NM_016190,uc001ezx.2_5end | |||
|cluster_id=chr1:152386747..152386752,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_2_at_CRNN_5end | |||
|id=chr1:152386747..152386752,- | |||
|ontology_enrichment_celltype=CL:0002623!8.91e-10!3;CL:0002621!1.57e-09!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.72e-17;1!UBERON:0008814;4.34e-09;2!UBERON:0010056;4.34e-09;2!UBERON:0005795;5.03e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!4.31e-19!21;UBERON:0003127!3.21e-14!2;UBERON:0000165!4.97e-14!28;UBERON:0000930!4.97e-14!28;UBERON:0000161!7.75e-14!35;UBERON:0000078!6.07e-13!18;UBERON:0007023!3.09e-11!115;UBERON:0001042!7.35e-11!10;UBERON:0009145!7.35e-11!10;UBERON:0003408!1.38e-10!10;UBERON:0001044!1.70e-10!6;UBERON:0003293!1.70e-10!6;UBERON:0003294!1.70e-10!6;UBERON:0010047!1.70e-10!6;UBERON:0000167!1.70e-10!6;UBERON:0001723!4.39e-10!3;UBERON:0001033!4.39e-10!3;UBERON:0010056!4.39e-10!3;UBERON:0006562!6.97e-10!11;UBERON:0001949!1.57e-09!3;UBERON:0002106!3.83e-09!3;UBERON:0004854!3.83e-09!3;UBERON:0009034!3.83e-09!3;UBERON:0002095!3.83e-09!3;UBERON:0004782!3.83e-09!3;UBERON:0003281!3.83e-09!3;UBERON:0009664!3.83e-09!3;UBERON:0002296!3.83e-09!3;UBERON:0005602!3.83e-09!3;UBERON:0001179!3.83e-09!3;UBERON:0006293!3.83e-09!3;UBERON:0001004!4.88e-09!72;UBERON:0004177!1.87e-08!7;UBERON:0002372!3.10e-08!1;UBERON:0001961!3.10e-08!1;UBERON:0001744!3.10e-08!1;UBERON:0001735!3.10e-08!1;UBERON:0000153!3.96e-08!129;UBERON:0007811!3.96e-08!129;UBERON:0006834!4.99e-08!1;UBERON:0000989!6.52e-08!1;UBERON:0008811!6.52e-08!1;UBERON:0006258!6.52e-08!1;UBERON:0005876!6.52e-08!1;UBERON:0004874!6.52e-08!1;UBERON:0007029!6.97e-08!1;UBERON:0001444!1.07e-07!48;UBERON:0001007!1.76e-07!155;UBERON:0001555!1.76e-07!155;UBERON:0007026!1.76e-07!155;UBERON:0001041!2.30e-07!98;UBERON:0008814!3.38e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.43e-21;3!UBERON:0001033;1.43e-21;3!UBERON:0002372;6.47e-17;1!UBERON:0001961;6.47e-17;1!UBERON:0001744;6.47e-17;1!UBERON:0001042;6.47e-17;1!UBERON:0001735;6.47e-17;1!UBERON:0005795;1.21e-16;1!UBERON:0006834;1.79e-16;1!UBERON:0000165;1.05e-13;28!UBERON:0000002;4.37e-11;6!UBERON:0001560;4.37e-11;6!UBERON:0001044;5.22e-11;6!UBERON:0003293;5.22e-11;6!UBERON:0003294;5.22e-11;6!UBERON:0010047;5.22e-11;6!UBERON:0003408;5.22e-11;6!UBERON:0000167;5.22e-11;6!UBERON:0001041;1.93e-10;14!UBERON:0000341;3.71e-09;2!UBERON:0006562;4.02e-09;2!UBERON:0003127;5.94e-09;2!UBERON:0000995;1.22e-08;17!UBERON:0003975;3.43e-08;18!UBERON:0000161;8.09e-08;19!UBERON:0000166;8.09e-08;19!UBERON:0004175;4.27e-07;21!UBERON:0004921;6.41e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.43e-21,3;UBERON:0001033,1.43e-21,3;UBERON:0010056,1.43e-21,3;UBERON:0000166,1.97e-17,22;UBERON:0002372,6.47e-17,1;UBERON:0001961,6.47e-17,1;UBERON:0001744,6.47e-17,1;UBERON:0001735,6.47e-17,1;UBERON:0006834,1.93e-16,1;UBERON:0001042,1.41e-14,10;UBERON:0009145,1.41e-14,10;UBERON:0006562,2.60e-13,11;UBERON:0000165,3.05e-13,29;UBERON:0000930,3.05e-13,29;UBERON:0005795,2.27e-11,22;UBERON:0000002,4.16e-11,6;UBERON:0001560,4.16e-11,6;UBERON:0001044,5.09e-11,6;UBERON:0003293,5.09e-11,6;UBERON:0003294,5.09e-11,6;UBERON:0010047,5.09e-11,6;UBERON:0000167,5.09e-11,6;UBERON:0000161,1.13e-10,36;UBERON:0000341,3.71e-09,2;UBERON:0003127,5.94e-09,2;UBERON:0000153,1.07e-08,62;UBERON:0007811,1.07e-08,62;UBERON:0008814,2.99e-08,18;UBERON:0001041,3.40e-08,87;UBERON:0007023,5.58e-08,114;UBERON:0001557,6.02e-08,19;UBERON:0001444,7.80e-08,49;UBERON:0001004,3.31e-07,74;UBERON:0000995,4.23e-07,21;UBERON:0003408,5.76e-07,10;UBERON:0000033,7.57e-07,56;UBERON:0003975,8.43e-07,22 | |||
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|short_description=p2@CRNN | |||
}} | }} |
Latest revision as of 03:31, 17 September 2015
Short description: | p2@CRNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRNN_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_NM_016190, uc001ezx.2_5end |
EntrezGene: | CRNN |
HGNC: | 1230 |
UniProt: | Q9UBG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.43e-21 | 3 |
gustatory system | 1.43e-21 | 3 |
future tongue | 1.43e-21 | 3 |
oral opening | 1.97e-17 | 22 |
tonsil | 6.47e-17 | 1 |
mucosa-associated lymphoid tissue | 6.47e-17 | 1 |
lymphoid tissue | 6.47e-17 | 1 |
tonsillar ring | 6.47e-17 | 1 |
uterus or analog | 1.93e-16 | 1 |
chordate pharynx | 1.41e-14 | 10 |
pharyngeal region of foregut | 1.41e-14 | 10 |
pharynx | 2.60e-13 | 11 |
mouth | 3.05e-13 | 29 |
stomodeum | 3.05e-13 | 29 |
embryonic uterus | 2.27e-11 | 22 |
uterine cervix | 4.16e-11 | 6 |
neck of organ | 4.16e-11 | 6 |
saliva-secreting gland | 5.09e-11 | 6 |
gland of oral region | 5.09e-11 | 6 |
gland of foregut | 5.09e-11 | 6 |
oral gland | 5.09e-11 | 6 |
oral cavity | 5.09e-11 | 6 |
orifice | 1.13e-10 | 36 |
throat | 3.71e-09 | 2 |
open tracheal system trachea | 5.94e-09 | 2 |
anterior region of body | 1.07e-08 | 62 |
craniocervical region | 1.07e-08 | 62 |
pharyngeal arch system | 2.99e-08 | 18 |
foregut | 3.40e-08 | 87 |
adult organism | 5.58e-08 | 114 |
upper respiratory tract | 6.02e-08 | 19 |
subdivision of head | 7.80e-08 | 49 |
respiratory system | 3.31e-07 | 74 |
uterus | 4.23e-07 | 21 |
gland of gut | 5.76e-07 | 10 |
head | 7.57e-07 | 56 |
internal female genitalia | 8.43e-07 | 22 |