FFCP PHASE1:Hg19::chr1:153940188..153940220,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:153940188..153940220,-
|short_description=p5@SLC39A1
|description=CAGE_peak_5_at_SLC39A1_5end
|association_with_transcript=0bp_to_ENST00000310483,NM_014437...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27173 | |EntrezGene=27173 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12876 | |HGNC=12876 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY26,Q5T4K1 | |UniProt=Q9NY26,Q5T4K1 | ||
|association_with_transcript=0bp_to_ENST00000310483,NM_014437,uc001fdl.2_5end | |||
|cluster_id=chr1:153940188..153940220,- | |||
|description=CAGE_peak_5_at_SLC39A1_5end | |||
|id=chr1:153940188..153940220,- | |||
|ontology_enrichment_celltype=CL:0000988!1.93e-09!182;CL:0000037!8.55e-09!172;CL:0000566!8.55e-09!172;CL:0002032!2.34e-08!165;CL:0000837!2.34e-08!165 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.63e-09,177;CL:0000037,7.87e-09,168;CL:0002032,6.14e-08,161;CL:0000837,6.14e-08,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.73e-10!51;DOID:0060083!1.73e-10!51;DOID:1240!5.48e-09!39;DOID:8692!3.30e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.22e-10;39!DOID:2531;6.43e-09;51!DOID:0060083;6.43e-09;51!DOID:8692;8.80e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.39e-14,51;DOID:0060083,5.39e-14,51;DOID:1240,2.25e-12,39;DOID:8692,2.21e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.22e-07!94;UBERON:0001016!1.22e-07!94;UBERON:0001017!1.46e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.57e-07,89 | |||
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| ||
|short_description=p5@SLC39A1 | |||
}} | }} |
Latest revision as of 07:59, 17 September 2015
Short description: | p5@SLC39A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC39A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000310483, NM_014437, uc001fdl.2_5end |
EntrezGene: | SLC39A1 |
HGNC: | 12876 |
UniProt: | Q9NY26Q5T4K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.63e-09 | 177 |
hematopoietic stem cell | 7.87e-09 | 168 |
hematopoietic oligopotent progenitor cell | 6.14e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.14e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.57e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.39e-14 | 51 |
immune system cancer | 5.39e-14 | 51 |
leukemia | 2.25e-12 | 39 |
myeloid leukemia | 2.21e-09 | 31 |