FFCP PHASE1:Hg19::chr1:153963227..153963249,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:153963227..153963249,+
|short_description=p1@RPS27
|description=CAGE_peak_1_at_RPS27_5end
|association_with_transcript=0bp_to_ENST00000368567,ENST000003925...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6232 | |EntrezGene=6232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10416 | |HGNC=10416 | ||
|TSSclassifier=strong | |||
|UniProt=P42677,Q5T4L4,Q5T4L6 | |UniProt=P42677,Q5T4L4,Q5T4L6 | ||
|association_with_transcript=0bp_to_ENST00000368567,ENST00000392558,ENST00000477151,ENST00000493224,NM_001030,uc001fdv.2_5end | |||
|cluster_id=chr1:153963227..153963249,+ | |||
|coexpression_cluster_id=C527 | |||
|description=CAGE_peak_1_at_RPS27_5end | |||
|id=chr1:153963227..153963249,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.89e-21!119;CL:0002031!2.87e-18!124;CL:0000542!4.71e-17!53;CL:0000051!4.71e-17!53;CL:0000838!5.11e-17!52;CL:0000037!1.45e-16!172;CL:0000566!1.45e-16!172;CL:0000738!2.06e-16!140;CL:0000988!6.58e-16!182;CL:0002032!7.59e-15!165;CL:0000837!7.59e-15!165;CL:0002057!1.91e-12!42;CL:0000791!5.80e-12!18;CL:0000789!5.80e-12!18;CL:0002420!5.80e-12!18;CL:0002419!5.80e-12!18;CL:0000790!5.80e-12!18;CL:0000860!3.25e-11!45;CL:0000084!5.99e-11!25;CL:0000827!5.99e-11!25;CL:0002320!1.56e-09!365;CL:0000003!5.85e-09!722;CL:0000134!1.14e-08!358;CL:0000236!3.14e-08!14;CL:0000625!5.12e-08!11;CL:0000219!1.13e-07!390;CL:0000048!9.65e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.80e-12;18!CL:0000789;5.80e-12;18!CL:0002419;5.80e-12;18!CL:0000084;5.95e-11;25!CL:0000542;6.16e-11;53!CL:0000860;1.91e-09;33!CL:0002057;1.91e-09;33!CL:0002087;1.46e-08;104!CL:0000236;2.22e-08;13!CL:0000625;5.12e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.91e-22,115;CL:0002031,5.89e-19,120;CL:0000542,4.71e-17,53;CL:0000051,4.71e-17,53;CL:0000037,5.04e-17,168;CL:0000838,5.11e-17,52;CL:0000738,5.73e-17,136;CL:0000988,3.63e-16,177;CL:0002032,2.80e-15,161;CL:0000837,2.80e-15,161;CL:0000860,1.91e-12,42;CL:0002057,1.91e-12,42;CL:0000791,5.80e-12,18;CL:0000789,5.80e-12,18;CL:0002420,5.80e-12,18;CL:0002419,5.80e-12,18;CL:0000790,5.80e-12,18;CL:0000084,5.99e-11,25;CL:0000827,5.99e-11,25;CL:0002320,1.20e-09,361;CL:0000473,1.47e-09,48;CL:0000234,1.47e-09,48;CL:0000134,8.82e-09,354;CL:0000236,3.14e-08,14;CL:0000625,5.12e-08,11;CL:0000219,9.12e-08,386;CL:0000048,8.06e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000790;5.80e-12;18!CL:0000051;6.16e-11;53!CL:0002057;2.03e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.47e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.96e-10,371 | |||
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| ||
|short_description=p1@RPS27 | |||
}} | }} |
Latest revision as of 08:17, 17 September 2015
Short description: | p1@RPS27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS27_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000368567, ENST00000392558, ENST00000477151, ENST00000493224, NM_001030, uc001fdv.2_5end |
EntrezGene: | RPS27 |
HGNC: | 10416 |
UniProt: | P42677Q5T4L4Q5T4L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 5.91e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 5.89e-19 | 120 |
lymphocyte | 4.71e-17 | 53 |
common lymphoid progenitor | 4.71e-17 | 53 |
hematopoietic stem cell | 5.04e-17 | 168 |
lymphoid lineage restricted progenitor cell | 5.11e-17 | 52 |
leukocyte | 5.73e-17 | 136 |
hematopoietic cell | 3.63e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.80e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.80e-15 | 161 |
classical monocyte | 1.91e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.91e-12 | 42 |
mature alpha-beta T cell | 5.80e-12 | 18 |
alpha-beta T cell | 5.80e-12 | 18 |
immature T cell | 5.80e-12 | 18 |
mature T cell | 5.80e-12 | 18 |
immature alpha-beta T cell | 5.80e-12 | 18 |
T cell | 5.99e-11 | 25 |
pro-T cell | 5.99e-11 | 25 |
connective tissue cell | 1.20e-09 | 361 |
defensive cell | 1.47e-09 | 48 |
phagocyte | 1.47e-09 | 48 |
mesenchymal cell | 8.82e-09 | 354 |
B cell | 3.14e-08 | 14 |
CD8-positive, alpha-beta T cell | 5.12e-08 | 11 |
motile cell | 9.12e-08 | 386 |
multi fate stem cell | 8.06e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.96e-10 | 371 |