FFCP PHASE1:Hg19::chr1:154999202..154999220,-: Difference between revisions
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|id=chr1:154999202..154999220,-
|short_description=p1@DCST2
|description=CAGE_peak_1_at_DCST2_5end
|association_with_transcript=24bp_to_ENST00000498036_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=127579 | |EntrezGene=127579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26562 | |HGNC=26562 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000498036_5end | |||
|cluster_id=chr1:154999202..154999220,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_DCST2_5end | |||
|id=chr1:154999202..154999220,- | |||
|ontology_enrichment_celltype=CL:0002541!2.05e-20!3;CL:0000083!3.42e-15!4 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.24e-88;3!CL:0000349;4.52e-32;19!CL:0002537;1.83e-14;5!CL:0000134;3.11e-11;55!CL:0000723;8.20e-09;61!CL:0000048;7.00e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.24e-88,3;CL:0000349,4.52e-32,19;CL:0002537,1.83e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!9.99e-16!1;DOID:10165!9.99e-16!1;DOID:1798!9.99e-16!1;DOID:1793!3.42e-15!4;DOID:170!1.90e-10!6;DOID:4468!1.73e-08!2;DOID:4074!2.31e-08!2;DOID:4905!2.31e-08!2;DOID:3498!2.31e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.05e-20!3;UBERON:0000920!2.05e-20!3;UBERON:0003124!3.21e-19!7;UBERON:0005631!7.69e-17!14;UBERON:0000158!7.69e-17!14;UBERON:0000478!6.07e-10!24;UBERON:0003127!3.08e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.24e-88;3!UBERON:0000920;6.24e-88;3!UBERON:0005631;1.10e-59;10!UBERON:0000158;1.10e-59;10!UBERON:0000478;1.16e-25;24!UBERON:0000305;9.89e-11;7!UBERON:0004923;3.61e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.24e-88,3;UBERON:0005631,4.85e-43,14;UBERON:0000158,4.85e-43,14;UBERON:0003124,1.49e-38,7;UBERON:0000478,1.16e-25,24;UBERON:0000305,9.89e-11,7;UBERON:0004923,4.66e-10,66;UBERON:0004871,1.47e-09,8 | |||
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|short_description=p1@DCST2 | |||
}} | }} |
Latest revision as of 11:06, 17 September 2015
Short description: | p1@DCST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCST2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 24bp_to_ENST00000498036_5end |
EntrezGene: | DCST2 |
HGNC: | 26562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.24e-88 | 3 |
extraembryonic cell | 4.52e-32 | 19 |
amnion mesenchymal stem cell | 1.83e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.24e-88 | 3 |
extraembryonic membrane | 4.85e-43 | 14 |
membranous layer | 4.85e-43 | 14 |
chorion | 1.49e-38 | 7 |
extraembryonic structure | 1.16e-25 | 24 |
amnion | 9.89e-11 | 7 |
organ component layer | 4.66e-10 | 66 |
somatic layer of lateral plate mesoderm | 1.47e-09 | 8 |