FFCP PHASE1:Hg19::chr1:153538268..153538288,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6273 | |EntrezGene=6273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10492 | |HGNC=10492 | ||
|TSSclassifier=strong | |||
|UniProt=P29034 | |UniProt=P29034 | ||
|association_with_transcript=17bp_to_ENST00000497140,NM_005978,uc001fcb.2_5end | |association_with_transcript=17bp_to_ENST00000497140,NM_005978,uc001fcb.2_5end | ||
|cluster_id=chr1:153538268..153538288,- | |||
|coexpression_cluster_id=C3871 | |coexpression_cluster_id=C3871 | ||
|description=CAGE_peak_4_at_S100A2_5end | |description=CAGE_peak_4_at_S100A2_5end | ||
|id=chr1:153538268..153538288,- | |id=chr1:153538268..153538288,- | ||
|ontology_enrichment_celltype=CL:0000860;3.02e-30;33!CL:0002057;3.02e-30;33!CL:0000473;6.37e-20;39!CL:0000234;6.37e-20;39!CL:0002076;6.89e-14;42!CL:0000576;1.25e-12;48!CL:0002368;3.51e-12;13!CL:0002202;4.22e-08;9!CL:0002632;4.22e-08;9!CL:0000766;6.98e-07;69 | |ontology_enrichment_celltype=CL:0000548!1.72e-21!679;CL:0000004!1.72e-21!679;CL:0000255!1.72e-21!679;CL:0000012!7.91e-21!682;CL:0000066!5.10e-19!254;CL:0000063!1.48e-13!578;CL:0002076!3.38e-13!43;CL:0000003!9.64e-13!722;CL:0000860!2.26e-12!45;CL:0002057!4.46e-12!42;CL:0002371!5.06e-12!591;CL:0000144!1.76e-11!625;CL:0000220!2.73e-11!246;CL:0002321!7.23e-11!248;CL:0000223!9.88e-11!59;CL:0002368!2.32e-09!13;CL:0002202!4.75e-07!9;CL:0002632!4.75e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.02e-30;33!CL:0002057;3.02e-30;33!CL:0000473;6.37e-20;39!CL:0000234;6.37e-20;39!CL:0002076;6.89e-14;42!CL:0000576;1.25e-12;48!CL:0002368;3.51e-12;13!CL:0002202;4.22e-08;9!CL:0002632;4.22e-08;9!CL:0000766;6.98e-07;69 | ||
|ontology_enrichment_disease=DOID:1749;1.13e-08;14 | |ontology_enrichment_celltype_v019_2=CL:0000860,1.81e-23,42;CL:0002057,1.81e-23,42;CL:0000473,3.33e-19,48;CL:0000234,3.33e-19,48;CL:0002076,6.18e-18,42;CL:0000066,1.64e-15,253;CL:0002194,1.98e-15,59;CL:0000576,1.98e-15,59;CL:0000040,1.98e-15,59;CL:0000559,1.98e-15,59;CL:0002009,1.35e-14,61;CL:0000223,2.61e-13,58;CL:0000839,9.61e-13,66;CL:0000557,2.08e-12,67;CL:0002368,3.28e-12,13;CL:0000766,6.89e-11,72;CL:0002202,3.92e-08,9;CL:0002632,3.92e-08,9 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;5.33e-18;42!CL:0000223;1.84e-08;58 | ||
|ontology_enrichment_disease=DOID:1749!2.25e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.13e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.69e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.57e-09!448;UBERON:0004120!1.57e-09!448;UBERON:0006603!1.57e-09!448;UBERON:0002204!8.39e-09!167;UBERON:0000467!2.44e-08!625;UBERON:0002050!3.26e-08!605;UBERON:0005423!3.26e-08!605;UBERON:0000480!3.39e-08!626;UBERON:0000923!4.44e-08!604;UBERON:0005291!4.44e-08!604;UBERON:0006598!4.44e-08!604;UBERON:0002532!4.44e-08!604;UBERON:0003102!8.89e-08!95;UBERON:0004765!1.02e-07!101;UBERON:0001434!1.02e-07!101;UBERON:0000062!1.36e-07!511;UBERON:0003104!2.69e-07!238;UBERON:0009142!2.69e-07!238;UBERON:0000922!2.93e-07!612;UBERON:0004119!6.58e-07!169;UBERON:0000925!6.58e-07!169;UBERON:0006595!6.58e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,2.20e-13,90;UBERON:0001434,6.37e-13,100;UBERON:0002371,2.11e-11,76;UBERON:0001474,1.46e-10,82;UBERON:0002405,1.33e-07,93;UBERON:0002390,9.00e-07,98;UBERON:0003061,9.00e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,5.58240934377942,0.436882744260345,0.791300934685361,1.23766352960047,1.65698687863958,0,0,0,0,0.861847406537515,2.04000691244253,0.626909442956176,0,0.821246550437305,0.376627918784408,0.0764134057479513,0,0,0,0,0.464448369948228,9.19421224478927,9.638589400904,5.54631015250181,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,2.61716829803216,3.40088349319928,2.42584061187816,2.55671940596253,4.11167888021826,4.64559556342655,3.45230870786581,7.68482119587302,7.56743135643473,2.06847408441971,5.16387746867061,4.06279459783025,3.01187743268168,4.91231070104122,3.82029923556644,4.28517449319264,5.1348644332175,3.19668562899521,4.28806690242731,5.78444607102732,5.54092175692502,2.03146467040009,6.24123747160254,4.9825779919646,9.04495194924276,9.38669253156363,7.8187984093842,1.21079900526674,4.41933163185078,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,0.50133791063589,0.724232594804119,0,0.486634870302636,0.756278537312543,0.665188192387692,0.087834785693126,0,5.46442932438813,4.44941331341315,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0,0,0,0.735326160691737,0,0.17859945656816,0,0.337834441449967,0,0,0.549605231791222,0,0,4.36094052142534,0,0.633152558322899,0,0,0,0,0,0.49333509683432,0,0.269421344139376,0.326923806226917,0,0,0,0,1.71141546463335,0,1.29177948508141,2.10434827678571,1.12360645361799,0.204154171254893,0.859840221182376,0.206651562351531,0,0.494533858557114,0,0,1.34668891163253,1.00094815897571,0,1.31693286264251,0.919463387397059,0.600952235626387,0.567160915800105,0,0.213557388818567,0,0.900273288253207,0.515262646192195,0.257640540045629,0.18611685633159,0,0.194874010322397,0.252433774244115,0.184099797284599,0.323292113637624,0.355009592516614,0.906768884048762,0.508681776931463,5.21804303540901,1.63647672354501,2.58124135850103,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.591534000199219,0.337169380156203,0.482022059766964,0.220587945464788,0.871517776369625,0,1.07865046528132,0.392442930250692,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.171567810298526,1.42675371031213,4.49607013030478,3.61904300681871,1.38882667737794,0.325808305310325,0,1.44331342025273,0.811512834825538,0.117408694235822,0,0,0,0,0,0,0,0,2.81201501960331,2.35174979478403,3.40260233381728,3.22410681730254,4.35950907770943,4.60059214998253,0,0,0,0,0.12624243342638,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,1.690605505112,0,1.04007436911366,0.257207374262142,1.41849132023278,0.799266537048298,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.399891964728228,0,0.502257091432126,0,2.15662369942424,3.44585807502342,4.27910715122155,0.723906533337896,0.410952645100767,1.79060963239896,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,1.08506009479894,0.831883446123229,0.535286966391485,0.157702415033935,0.35142424497814,0.300946099727719,0,2.0694614258501,0.664225598535437,1.65932251687533,0.173767228936166,0,0,0,0,0,4.85004114314015,0,0.604780586659361,0,0,0.561320188866147,0,0,0.160853921143607,1.48418066444991,0.154209693802656,0.355123450626254,0.328508624055237,0,0.232420756919918,0.120859449591622,1.20303882181971,7.09023614806402,0.229628896329213,0,0.262248829918848,0,0.616122696835318,2.35304930753057,1.46139224653261,0.73886140225013,0,0.170093705276516,1.72732732881711,0,1.62567862526312,1.00337954770971,1.52925763827023,0,1.79099803777743,0,0,1.79515087581472,0.328014645699706,1.95227036798582,0.103041011647722,0.457847324091717,0.165018999841176,2.29706215198469,0,0,0.870036464629098,0.924291702687866,0.307007349452259,0.413509717453592,0,0.145016693914229,0,0,3.14041339185858,2.88285101047659,1.27612712494584,5.6648357279108,0.464845549297286,0,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073,0.55597265731176,1.00187420719394,0.372158369359667,0.316379424718726,0.190630193923825,0.767693373934002,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0.117812402345686,1.01091240786658,1.58510321173008,0.421258456238981,1.95053495635836,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.811641507850816,2.16876448669825,0.845086807596724,0.143411352204052,0.0982490410131212,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0,6.54310366533482,2.68120910214315,8.71127878890581,0,4.73555909938353,0,3.10401107475673,2.29723400206959,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0.568272293612826,0.71623345421307,0.296964680832639,1.53580351049616,0,0,1.33570446027487,0.988823245360557,0.844501632511974,0,0,0,2.96579179256249,0,0.311039587661807,2.15684042753584,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,1.7069017242824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| ||
|short_description=p4@S100A2 | |short_description=p4@S100A2 | ||
}} | }} |
Latest revision as of 06:10, 17 September 2015
Short description: | p4@S100A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_S100A2_5end |
Coexpression cluster: | C3871_nasal_CD14_Alveolar_squamous_Prostate_Tracheal_large |
Association with transcript: | 17bp_to_ENST00000497140, NM_005978, uc001fcb.2_5end |
EntrezGene: | S100A2 |
HGNC: | 10492 |
UniProt: | P29034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.81e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.81e-23 | 42 |
defensive cell | 3.33e-19 | 48 |
phagocyte | 3.33e-19 | 48 |
endo-epithelial cell | 6.18e-18 | 42 |
epithelial cell | 1.64e-15 | 253 |
monopoietic cell | 1.98e-15 | 59 |
monocyte | 1.98e-15 | 59 |
monoblast | 1.98e-15 | 59 |
promonocyte | 1.98e-15 | 59 |
macrophage dendritic cell progenitor | 1.35e-14 | 61 |
endodermal cell | 2.61e-13 | 58 |
myeloid lineage restricted progenitor cell | 9.61e-13 | 66 |
granulocyte monocyte progenitor cell | 2.08e-12 | 67 |
respiratory epithelial cell | 3.28e-12 | 13 |
myeloid leukocyte | 6.89e-11 | 72 |
epithelial cell of tracheobronchial tree | 3.92e-08 | 9 |
epithelial cell of lower respiratory tract | 3.92e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 2.20e-13 | 90 |
skeletal system | 6.37e-13 | 100 |
bone marrow | 2.11e-11 | 76 |
bone element | 1.46e-10 | 82 |
immune system | 1.33e-07 | 93 |
hematopoietic system | 9.00e-07 | 98 |
blood island | 9.00e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.69e-09 | 14 |