FFCP PHASE1:Hg19::chr1:156621459..156621474,-: Difference between revisions
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|id=chr1:156621459..156621474,-
|short_description=p@chr1:156621459..156621474,-
|description=CAGE_peak_at_chr1:156621459..156621474,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:156621459..156621474,- | |||
|coexpression_cluster_id=C1816 | |||
|description=CAGE_peak_at_chr1:156621459..156621474,- | |||
|id=chr1:156621459..156621474,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.29e-11;10!CL:0000147;5.00e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.30e-11,10;CL:0000541,7.30e-11,10;CL:0000147,5.00e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.01e-09;3!UBERON:0003057;1.01e-09;3!UBERON:0006215;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.28e-80!57;UBERON:0005068!3.28e-80!57;UBERON:0006241!3.28e-80!57;UBERON:0007135!3.28e-80!57;UBERON:0002020!6.19e-73!34;UBERON:0003528!6.19e-73!34;UBERON:0001893!8.23e-73!34;UBERON:0000955!1.07e-72!69;UBERON:0006238!1.07e-72!69;UBERON:0002616!3.00e-72!59;UBERON:0002791!4.06e-69!33;UBERON:0005743!2.74e-68!86;UBERON:0001017!3.85e-68!82;UBERON:0001869!2.00e-65!32;UBERON:0002780!1.06e-64!41;UBERON:0001890!1.06e-64!41;UBERON:0006240!1.06e-64!41;UBERON:0003080!4.73e-63!42;UBERON:0000073!3.36e-61!94;UBERON:0001016!3.36e-61!94;UBERON:0003075!3.59e-54!86;UBERON:0007284!3.59e-54!86;UBERON:0002346!1.88e-51!90;UBERON:0003056!3.15e-45!61;UBERON:0002619!3.55e-45!22;UBERON:0001950!1.14e-43!20;UBERON:0000033!8.11e-43!123;UBERON:0000153!1.74e-40!129;UBERON:0007811!1.74e-40!129;UBERON:0000956!1.57e-39!25;UBERON:0000203!1.57e-39!25;UBERON:0007023!7.72e-39!115;UBERON:0002308!1.04e-38!9;UBERON:0000125!1.04e-38!9;UBERON:0004121!6.62e-33!169;UBERON:0000924!5.72e-32!173;UBERON:0006601!5.72e-32!173;UBERON:0009663!1.10e-30!7;UBERON:0002420!1.73e-30!9;UBERON:0007245!1.73e-30!9;UBERON:0010009!1.73e-30!9;UBERON:0010011!1.73e-30!9;UBERON:0000454!1.73e-30!9;UBERON:0001871!1.09e-18!7;UBERON:0000369!1.14e-18!4;UBERON:0002435!1.14e-18!4;UBERON:0000204!1.14e-18!4;UBERON:0010082!1.14e-18!4;UBERON:0000025!1.58e-18!194;UBERON:0000200!9.05e-18!6;UBERON:0003076!1.55e-17!15;UBERON:0003057!1.55e-17!15;UBERON:0002680!4.81e-17!9;UBERON:0001895!4.81e-17!9;UBERON:0010092!4.81e-17!9;UBERON:0004733!7.96e-17!12;UBERON:0002028!7.96e-17!12;UBERON:0007277!7.96e-17!12;UBERON:0004732!1.84e-15!13;UBERON:0004111!1.41e-14!241;UBERON:0002021!1.52e-14!5;UBERON:0005383!2.10e-14!3;UBERON:0005382!2.10e-14!3;UBERON:0006331!1.48e-13!3;UBERON:0000988!1.61e-13!3;UBERON:0002771!2.71e-13!3;UBERON:0000064!3.72e-13!219;UBERON:0002298!5.05e-13!8;UBERON:0000477!4.35e-11!286;UBERON:0001873!3.83e-10!2;UBERON:0010122!3.83e-10!2;UBERON:0000475!4.55e-10!365;UBERON:0001875!5.50e-10!2;UBERON:0006514!5.50e-10!2;UBERON:0002148!9.39e-10!2;UBERON:0009662!9.39e-10!2;UBERON:0000483!1.17e-09!309;UBERON:0000119!1.71e-09!312;UBERON:0001872!6.70e-09!5;UBERON:0000349!1.86e-08!5;UBERON:0002037!2.90e-07!6;UBERON:0006215!2.90e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.01e-09;3!UBERON:0005174;1.01e-09;3!UBERON:0001137;1.01e-09;3!UBERON:0002114;1.47e-09;2!UBERON:0001016;8.04e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.01e-09,3;UBERON:0005174,1.01e-09,3;UBERON:0001137,1.01e-09,3;UBERON:0002114,1.41e-09,2;UBERON:0001017,1.03e-07,81;UBERON:0003076,1.18e-07,15;UBERON:0003057,1.18e-07,15;UBERON:0001049,2.20e-07,56;UBERON:0005068,2.20e-07,56;UBERON:0006241,2.20e-07,56;UBERON:0007135,2.20e-07,56;UBERON:0001016,5.66e-07,89 | |||
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| ||
|short_description=p@chr1:156621459..156621474,- | |||
}} | }} |
Latest revision as of 22:41, 27 July 2015
Short description: | p@chr1:156621459..156621474, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:156621459..156621474, - |
Coexpression cluster: | C1816_spinal_Melanocyte_brain_hippocampus_amygdala_corpus_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.30e-11 | 10 |
melanoblast | 7.30e-11 | 10 |
pigment cell | 5.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.01e-09 | 3 |
dorsal region element | 1.01e-09 | 3 |
dorsum | 1.01e-09 | 3 |
duodenum | 1.41e-09 | 2 |
central nervous system | 1.03e-07 | 81 |
posterior neural tube | 1.18e-07 | 15 |
chordal neural plate | 1.18e-07 | 15 |
neural tube | 2.20e-07 | 56 |
neural rod | 2.20e-07 | 56 |
future spinal cord | 2.20e-07 | 56 |
neural keel | 2.20e-07 | 56 |
nervous system | 5.66e-07 | 89 |