FFCP PHASE1:Hg19::chr13:107029084..107029103,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42809 | |HGNC=42809 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000444865_5end | |association_with_transcript=-36bp_to_ENST00000444865_5end | ||
|cluster_id=chr13:107029084..107029103,+ | |||
|description=CAGE_peak_4_at_LINC00460_5end | |description=CAGE_peak_4_at_LINC00460_5end | ||
|id=chr13:107029084..107029103,+ | |id=chr13:107029084..107029103,+ | ||
|ontology_enrichment_celltype=CL:0000243!4.24e-12!15;CL:0000125!4.24e-12!15;CL:0000030!4.24e-12!15;CL:0000339!4.24e-12!15;CL:0000095!1.21e-10!17;CL:0000123!1.21e-10!17;CL:0000128!4.92e-07!7;CL:0000126!4.92e-07!7;CL:0000127!4.92e-07!7;CL:0002453!4.92e-07!7;CL:0002319!5.41e-07!25;CL:0000054!9.71e-07!2;CL:0000137!9.71e-07!2;CL:0000092!9.71e-07!2 | |ontology_enrichment_celltype=CL:0000243!4.24e-12!15;CL:0000125!4.24e-12!15;CL:0000030!4.24e-12!15;CL:0000339!4.24e-12!15;CL:0000095!1.21e-10!17;CL:0000123!1.21e-10!17;CL:0000128!4.92e-07!7;CL:0000126!4.92e-07!7;CL:0000127!4.92e-07!7;CL:0002453!4.92e-07!7;CL:0002319!5.41e-07!25;CL:0000054!9.71e-07!2;CL:0000137!9.71e-07!2;CL:0000092!9.71e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1001319;2.78e-26;1!CL:1000600;2.78e-26;1!CL:0000319;8.64e-26;1!CL:0000159;1.29e-13;2!CL:0002178;1.24e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.78e-26,1;CL:1000600,2.78e-26,1;CL:0000319,9.79e-26,1;CL:0000159,1.37e-13,2;CL:0002178,1.19e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:201!2.40e-08!6;DOID:0060100!2.40e-08!6;DOID:200!9.71e-07!2;DOID:4305!9.71e-07!2 | |ontology_enrichment_disease=DOID:201!2.40e-08!6;DOID:0060100!2.40e-08!6;DOID:200!9.71e-07!2;DOID:4305!9.71e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:5662;4.06e-26;1!DOID:3030;8.64e-26;1!DOID:3347;8.64e-26;1!DOID:4929;6.43e-14;2!DOID:3493;8.82e-14;2!DOID:299;1.20e-09;25!DOID:3119;3.97e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,4.61e-26,1;DOID:3347,5.93e-26,1;DOID:3030,9.79e-26,1;DOID:4929,6.43e-14,2;DOID:3493,8.28e-14,2;DOID:299,1.20e-09,25;DOID:3119,3.90e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000488!7.17e-07!4 | |ontology_enrichment_uberon=UBERON:0000488!7.17e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.16e-26;1!UBERON:0003703;2.16e-26;1!UBERON:0001174;2.16e-26;1!UBERON:0004914;2.16e-26;1!UBERON:0004645;2.78e-26;1!UBERON:0001256;2.78e-26;1!UBERON:0001259;2.78e-26;1!UBERON:0001255;7.30e-14;2!UBERON:0001556;7.30e-14;2!UBERON:0002114;1.01e-09;2!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.16e-26,1;UBERON:0003703,2.16e-26,1;UBERON:0001174,2.16e-26,1;UBERON:0004914,2.16e-26,1;UBERON:0004645,2.78e-26,1;UBERON:0001256,2.78e-26,1;UBERON:0001259,2.78e-26,1;UBERON:0001255,7.30e-14,2;UBERON:0001556,7.30e-14,2;UBERON:0002114,1.01e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.61560529038394,0.408001382488506,0,0,0.410623275218653,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.312160076830321,0,0,0,0.485618833104395,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.51336800074665,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,1.06461206063404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0.126621591911757,0,0.801588202515337,0,0,0,0,0,0.14405479798815,0.248505071130865,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.950403028674658,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,1.3807198521202,0,0,0,0,0,0,4.5835386727284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05785611324902,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.255640214277473,0,0,0.93061915699296,0,0,2.15930513953535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,3.25613074443898,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.61560529038394,0.408001382488506,0,0,0.410623275218653,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.312160076830321,0,0,0,0.485618833104395,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.51336800074665,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,1.06461206063404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0.126621591911757,0,0.801588202515337,0,0,0,0,0,0.14405479798815,0.248505071130865,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.950403028674658,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,1.3807198521202,0,0,0,0,0,0,4.5835386727284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05785611324902,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.255640214277473,0,0,0.93061915699296,0,0,2.15930513953535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,3.25613074443898,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@LINC00460 | |short_description=p4@LINC00460 | ||
}} | }} |
Latest revision as of 10:21, 16 September 2015
Short description: | p4@LINC00460 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LINC00460_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000444865_5end |
EntrezGene: | NA |
HGNC: | 42809 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.78e-26 | 1 |
lower urinary tract cell | 2.78e-26 | 1 |
mucus secreting cell | 9.79e-26 | 1 |
seromucus secreting cell | 1.37e-13 | 2 |
epithelial cell of stomach | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.16e-26 | 1 |
extrahepatic bile duct | 2.16e-26 | 1 |
common bile duct | 2.16e-26 | 1 |
duodenal papilla | 2.16e-26 | 1 |
urinary bladder urothelium | 2.78e-26 | 1 |
wall of urinary bladder | 2.78e-26 | 1 |
mucosa of urinary bladder | 2.78e-26 | 1 |
urinary bladder | 7.30e-14 | 2 |
lower urinary tract | 7.30e-14 | 2 |
duodenum | 1.01e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 4.61e-26 | 1 |
osteosarcoma | 5.93e-26 | 1 |
mucinous adenocarcinoma | 9.79e-26 | 1 |
tubular adenocarcinoma | 6.43e-14 | 2 |
signet ring cell adenocarcinoma | 8.28e-14 | 2 |
adenocarcinoma | 1.20e-09 | 25 |
gastrointestinal system cancer | 3.90e-08 | 14 |