FFCP PHASE1:Hg19::chr1:167059830..167059857,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:167059830..167059857,-
|short_description=p2@GPA33
|description=CAGE_peak_2_at_GPA33_5end
|association_with_transcript=10bp_to_ENST00000367868,NM_005814,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10223 | |EntrezGene=10223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4445 | |HGNC=4445 | ||
|TSSclassifier=strong | |||
|UniProt=Q99795,Q5VZP6 | |UniProt=Q99795,Q5VZP6 | ||
|association_with_transcript=10bp_to_ENST00000367868,NM_005814,uc001gea.1_5end | |||
|cluster_id=chr1:167059830..167059857,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_2_at_GPA33_5end | |||
|id=chr1:167059830..167059857,- | |||
|ontology_enrichment_celltype=CL:0000037!4.06e-26!172;CL:0000566!4.06e-26!172;CL:0002087!7.04e-26!119;CL:0000738!2.86e-25!140;CL:0002032!9.35e-24!165;CL:0000837!9.35e-24!165;CL:0000988!1.89e-23!182;CL:0000791!8.67e-22!18;CL:0000789!8.67e-22!18;CL:0002420!8.67e-22!18;CL:0002419!8.67e-22!18;CL:0000790!8.67e-22!18;CL:0002031!1.19e-20!124;CL:0000838!1.04e-19!52;CL:0000084!2.50e-19!25;CL:0000827!2.50e-19!25;CL:0000542!3.85e-19!53;CL:0000051!3.85e-19!53;CL:0000625!4.52e-15!11;CL:0002393!6.40e-11!9;CL:0002397!6.40e-11!9;CL:0000624!5.47e-10!6;CL:0000763!3.85e-08!112;CL:0000049!3.85e-08!112;CL:0000766!4.74e-07!76;CL:0002194!8.61e-07!63;CL:0000576!8.61e-07!63;CL:0000040!8.61e-07!63;CL:0000559!8.61e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.41e-30;18!CL:0000789;6.41e-30;18!CL:0002419;6.41e-30;18!CL:0000084;3.93e-23;25!CL:0000625;6.91e-18;11!CL:0000624;4.35e-16;6!CL:0000898;2.43e-09;3!CL:0000542;2.87e-09;53!CL:0000226;4.71e-08;3!CL:0000842;4.71e-08;3!CL:0000875;1.52e-07;3!CL:0002396;1.52e-07;3!CL:0000815;7.12e-07;2!CL:0000792;7.12e-07;2!CL:0002677;7.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.72e-30,18;CL:0000789,7.72e-30,18;CL:0002420,7.72e-30,18;CL:0002419,7.72e-30,18;CL:0000790,7.72e-30,18;CL:0000084,3.92e-23,25;CL:0000827,3.92e-23,25;CL:0000625,8.68e-18,11;CL:0000838,2.35e-16,52;CL:0000624,4.08e-16,6;CL:0000542,6.11e-16,53;CL:0000051,6.11e-16,53;CL:0002087,7.71e-16,115;CL:0000037,3.32e-14,168;CL:0000738,4.88e-14,136;CL:0000988,5.77e-13,177;CL:0002031,1.25e-11,120;CL:0002032,1.80e-11,161;CL:0000837,1.80e-11,161;CL:0000898,2.40e-09,3;CL:0002393,1.72e-08,9;CL:0002397,1.72e-08,9;CL:0000226,3.54e-08,3;CL:0000842,3.54e-08,3;CL:0000875,1.73e-07,3;CL:0002396,1.73e-07,3;CL:0000815,7.23e-07,2;CL:0000792,7.23e-07,2;CL:0002677,7.23e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;6.41e-30;18!CL:0000051;2.87e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.05e-12!102;UBERON:0003061!2.05e-12!102;UBERON:0002193!7.30e-12!112;UBERON:0000178!1.03e-10!15;UBERON:0000179!1.03e-10!15;UBERON:0000463!1.03e-10!15;UBERON:0004177!8.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.08e-18;15!UBERON:0000179;2.08e-18;15!UBERON:0000463;2.08e-18;15!UBERON:0000160;1.59e-12;17!UBERON:0000059;1.70e-10;11!UBERON:0002390;4.17e-10;32!UBERON:0005409;2.46e-09;22!UBERON:0004907;1.12e-07;5!UBERON:0001155;3.19e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.75e-18,15;UBERON:0000179,1.75e-18,15;UBERON:0000463,1.75e-18,15;UBERON:0000160,1.24e-12,17;UBERON:0000059,1.32e-10,11;UBERON:0005409,9.94e-10,25;UBERON:0002390,4.44e-08,98;UBERON:0003061,4.44e-08,98;UBERON:0004907,8.77e-08,5;UBERON:0002193,1.22e-07,108;UBERON:0001155,3.26e-07,9 | |||
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| ||
|short_description=p2@GPA33 | |||
}} | }} |
Latest revision as of 10:49, 18 September 2015
Short description: | p2@GPA33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPA33_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 10bp_to_ENST00000367868, NM_005814, uc001gea.1_5end |
EntrezGene: | GPA33 |
HGNC: | 4445 |
UniProt: | Q99795Q5VZP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.75e-18 | 15 |
haemolymphatic fluid | 1.75e-18 | 15 |
organism substance | 1.75e-18 | 15 |
intestine | 1.24e-12 | 17 |
large intestine | 1.32e-10 | 11 |
gastrointestinal system | 9.94e-10 | 25 |
hematopoietic system | 4.44e-08 | 98 |
blood island | 4.44e-08 | 98 |
lower digestive tract | 8.77e-08 | 5 |
hemolymphoid system | 1.22e-07 | 108 |
colon | 3.26e-07 | 9 |