FFCP PHASE1:Hg19::chr3:13028539..13028560,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9922 | |EntrezGene=9922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29112 | |HGNC=29112 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000450726,uc003bxu.3_5end | |association_with_transcript=-3bp_to_ENST00000450726,uc003bxu.3_5end | ||
|cluster_id=chr3:13028539..13028560,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_20_at_IQSEC1_5end | |description=CAGE_peak_20_at_IQSEC1_5end | ||
|id=chr3:13028539..13028560,- | |id=chr3:13028539..13028560,- | ||
|ontology_enrichment_celltype=CL:0002541!5.58e-12!3 | |ontology_enrichment_celltype=CL:0002541!5.58e-12!3 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.55e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.80e-38;3 | |||
|ontology_enrichment_disease=DOID:1799!1.06e-09!1;DOID:10165!1.06e-09!1;DOID:1798!1.06e-09!1;DOID:5662!2.08e-09!1 | |ontology_enrichment_disease=DOID:1799!1.06e-09!1;DOID:10165!1.06e-09!1;DOID:1798!1.06e-09!1;DOID:5662!2.08e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;2.52e-08;4!DOID:4362;6.58e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.43e-08,4;DOID:4362,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.59e-18!2;UBERON:0002757!1.59e-18!2;UBERON:0010134!1.59e-18!2;UBERON:0002784!1.59e-18!2;UBERON:0005408!1.59e-18!2;UBERON:0001899!1.59e-18!2;UBERON:0000476!5.58e-12!3;UBERON:0000920!5.58e-12!3;UBERON:0003124!4.52e-11!7;UBERON:0003296!1.01e-09!4;UBERON:0010133!1.01e-09!4;UBERON:0005631!1.43e-09!14;UBERON:0000158!1.43e-09!14;UBERON:0000966!7.21e-08!5;UBERON:0005388!7.21e-08!5;UBERON:0001802!7.21e-08!5;UBERON:0000970!4.98e-07!20 | |ontology_enrichment_uberon=UBERON:0001905!1.59e-18!2;UBERON:0002757!1.59e-18!2;UBERON:0010134!1.59e-18!2;UBERON:0002784!1.59e-18!2;UBERON:0005408!1.59e-18!2;UBERON:0001899!1.59e-18!2;UBERON:0000476!5.58e-12!3;UBERON:0000920!5.58e-12!3;UBERON:0003124!4.52e-11!7;UBERON:0003296!1.01e-09!4;UBERON:0010133!1.01e-09!4;UBERON:0005631!1.43e-09!14;UBERON:0000158!1.43e-09!14;UBERON:0000966!7.21e-08!5;UBERON:0005388!7.21e-08!5;UBERON:0001802!7.21e-08!5;UBERON:0000970!4.98e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0000966;1.44e-23;5!UBERON:0005388;1.44e-23;5!UBERON:0001802;1.44e-23;5!UBERON:0001894;2.46e-17;7!UBERON:0006955;2.55e-15;2!UBERON:0004801;2.55e-15;2!UBERON:0000970;1.84e-13;20!UBERON:0002104;7.43e-13;21!UBERON:0000020;8.40e-12;23!UBERON:0001032;2.43e-11;24!UBERON:0004456;2.43e-11;24!UBERON:0000019;6.19e-07;19!UBERON:0000047;6.19e-07;19!UBERON:0004088;6.19e-07;19!UBERON:0010230;6.19e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-57,2;UBERON:0002757,1.13e-57,2;UBERON:0010134,1.13e-57,2;UBERON:0005408,1.13e-57,2;UBERON:0001899,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0002784,1.78e-29,4;UBERON:0000966,7.84e-20,6;UBERON:0005388,7.84e-20,6;UBERON:0001802,7.84e-20,6;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0006955,2.74e-15,2;UBERON:0004801,2.74e-15,2;UBERON:0000970,7.43e-13,21;UBERON:0002104,7.43e-13,21;UBERON:0000020,2.43e-11,24;UBERON:0001032,2.43e-11,24;UBERON:0004456,2.43e-11,24;UBERON:0003056,7.86e-08,61 | |||
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|short_description=p20@IQSEC1 | |short_description=p20@IQSEC1 | ||
}} | }} |
Latest revision as of 18:43, 24 September 2015
Short description: | p20@IQSEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_IQSEC1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -3bp_to_ENST00000450726, uc003bxu.3_5end |
EntrezGene: | IQSEC1 |
HGNC: | 29112 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
retina | 7.84e-20 | 6 |
photoreceptor array | 7.84e-20 | 6 |
posterior segment of eyeball | 7.84e-20 | 6 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
uterine epithelium | 2.74e-15 | 2 |
cervix epithelium | 2.74e-15 | 2 |
eye | 7.43e-13 | 21 |
visual system | 7.43e-13 | 21 |
sense organ | 2.43e-11 | 24 |
sensory system | 2.43e-11 | 24 |
entire sense organ system | 2.43e-11 | 24 |
pre-chordal neural plate | 7.86e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.43e-08 | 4 |
cervical cancer | 6.77e-07 | 5 |