FFCP PHASE1:Hg19::chrX:48433379..48433393,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5935 | |EntrezGene=5935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9900 | |HGNC=9900 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000491236_5end | |association_with_transcript=1bp_to_ENST00000491236_5end | ||
|cluster_id=chrX:48433379..48433393,+ | |||
|description=CAGE_peak_4_at_RBM3_5end | |description=CAGE_peak_4_at_RBM3_5end | ||
|id=chrX:48433379..48433393,+ | |id=chrX:48433379..48433393,+ | ||
|ontology_enrichment_celltype=CL:0000144!1.04e-21!625;CL:0000055!4.54e-19!180;CL:0000548!1.11e-17!679;CL:0000004!1.11e-17!679;CL:0000255!1.11e-17!679;CL:0000012!1.13e-17!682;CL:0002371!1.29e-17!591;CL:0000222!3.50e-15!119;CL:0000220!3.91e-15!246;CL:0002321!4.36e-15!248;CL:0000003!8.74e-13!722;CL:0000057!1.13e-10!75;CL:0000680!4.91e-09!57;CL:0000056!4.91e-09!57;CL:0000355!4.91e-09!57;CL:0000723!6.20e-09!436;CL:0000048!7.04e-09!430;CL:0000034!1.07e-08!444;CL:0000393!1.33e-08!60;CL:0000211!1.33e-08!60;CL:0002139!3.79e-08!24;CL:0000187!1.01e-07!54;CL:0000183!2.92e-07!59;CL:0000213!5.16e-07!57;CL:0000215!5.16e-07!57 | |ontology_enrichment_celltype=CL:0000144!1.04e-21!625;CL:0000055!4.54e-19!180;CL:0000548!1.11e-17!679;CL:0000004!1.11e-17!679;CL:0000255!1.11e-17!679;CL:0000012!1.13e-17!682;CL:0002371!1.29e-17!591;CL:0000222!3.50e-15!119;CL:0000220!3.91e-15!246;CL:0002321!4.36e-15!248;CL:0000003!8.74e-13!722;CL:0000057!1.13e-10!75;CL:0000680!4.91e-09!57;CL:0000056!4.91e-09!57;CL:0000355!4.91e-09!57;CL:0000723!6.20e-09!436;CL:0000048!7.04e-09!430;CL:0000034!1.07e-08!444;CL:0000393!1.33e-08!60;CL:0000211!1.33e-08!60;CL:0002139!3.79e-08!24;CL:0000187!1.01e-07!54;CL:0000183!2.92e-07!59;CL:0000213!5.16e-07!57;CL:0000215!5.16e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002494;6.84e-10;16!CL:0002139;6.69e-09;24!CL:0002334;1.34e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.73e-16,121;CL:0000057,8.60e-12,76;CL:0002321,1.71e-11,250;CL:0000680,2.08e-11,58;CL:0000056,2.08e-11,58;CL:0000355,2.08e-11,58;CL:0000048,5.52e-11,427;CL:0000723,1.03e-10,433;CL:0000034,3.27e-10,441;CL:0002494,1.73e-09,16;CL:0000187,2.08e-09,55;CL:0002139,2.20e-09,24;CL:0000393,7.48e-09,61;CL:0000211,7.48e-09,61;CL:0000192,6.57e-08,43;CL:0000514,6.57e-08,43;CL:0002334,1.33e-07,12;CL:0000115,3.10e-07,36;CL:0002078,6.68e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000355;4.31e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.19e-11!79;UBERON:0007798!1.19e-11!79;UBERON:0000055!2.73e-10!69;UBERON:0004872!4.33e-10!84;UBERON:0004535!1.59e-09!110;UBERON:0001981!1.22e-08!60;UBERON:0007500!1.22e-08!60;UBERON:0004537!1.22e-08!60;UBERON:0006965!1.22e-08!60;UBERON:0001009!1.42e-08!113;UBERON:0000914!1.82e-08!83;UBERON:0002329!1.82e-08!83;UBERON:0003077!1.82e-08!83;UBERON:0003059!1.82e-08!83;UBERON:0007282!1.82e-08!83;UBERON:0009618!1.82e-08!83;UBERON:0007285!1.82e-08!83;UBERON:0001637!6.50e-08!42;UBERON:0003509!6.50e-08!42;UBERON:0004572!6.50e-08!42;UBERON:0000486!8.09e-08!82;UBERON:0004290!1.21e-07!70;UBERON:0001134!3.03e-07!61;UBERON:0002036!3.03e-07!61;UBERON:0003082!3.03e-07!61;UBERON:0002385!8.12e-07!63;UBERON:0001015!8.12e-07!63;UBERON:0000383!8.12e-07!63 | |ontology_enrichment_uberon=UBERON:0002049!1.19e-11!79;UBERON:0007798!1.19e-11!79;UBERON:0000055!2.73e-10!69;UBERON:0004872!4.33e-10!84;UBERON:0004535!1.59e-09!110;UBERON:0001981!1.22e-08!60;UBERON:0007500!1.22e-08!60;UBERON:0004537!1.22e-08!60;UBERON:0006965!1.22e-08!60;UBERON:0001009!1.42e-08!113;UBERON:0000914!1.82e-08!83;UBERON:0002329!1.82e-08!83;UBERON:0003077!1.82e-08!83;UBERON:0003059!1.82e-08!83;UBERON:0007282!1.82e-08!83;UBERON:0009618!1.82e-08!83;UBERON:0007285!1.82e-08!83;UBERON:0001637!6.50e-08!42;UBERON:0003509!6.50e-08!42;UBERON:0004572!6.50e-08!42;UBERON:0000486!8.09e-08!82;UBERON:0004290!1.21e-07!70;UBERON:0001134!3.03e-07!61;UBERON:0002036!3.03e-07!61;UBERON:0003082!3.03e-07!61;UBERON:0002385!8.12e-07!63;UBERON:0001015!8.12e-07!63;UBERON:0000383!8.12e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0007500;8.53e-09;56!UBERON:0001981;8.53e-09;56!UBERON:0004537;8.53e-09;56!UBERON:0000055;7.23e-08;65!UBERON:0001637;1.21e-07;42!UBERON:0003509;1.21e-07;42!UBERON:0004572;1.21e-07;42!UBERON:0002049;3.90e-07;75!UBERON:0007798;3.90e-07;75 | |||
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| ||
|short_description=p4@RBM3 | |short_description=p4@RBM3 | ||
}} | }} |
Latest revision as of 19:21, 15 September 2015
Short description: | p4@RBM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RBM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000491236_5end |
EntrezGene: | RBM3 |
HGNC: | 9900 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.73e-16 | 121 |
fibroblast | 8.60e-12 | 76 |
embryonic cell | 1.71e-11 | 250 |
muscle precursor cell | 2.08e-11 | 58 |
myoblast | 2.08e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.08e-11 | 58 |
multi fate stem cell | 5.52e-11 | 427 |
somatic stem cell | 1.03e-10 | 433 |
stem cell | 3.27e-10 | 441 |
cardiocyte | 1.73e-09 | 16 |
muscle cell | 2.08e-09 | 55 |
endothelial cell of vascular tree | 2.20e-09 | 24 |
electrically responsive cell | 7.48e-09 | 61 |
electrically active cell | 7.48e-09 | 61 |
smooth muscle cell | 6.57e-08 | 43 |
smooth muscle myoblast | 6.57e-08 | 43 |
preadipocyte | 1.33e-07 | 12 |
endothelial cell | 3.10e-07 | 36 |
meso-epithelial cell | 6.68e-07 | 45 |