FFCP PHASE1:Hg19::chr1:183441471..183441498,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:183441471..183441498,+
|short_description=p3@SMG7
|description=CAGE_peak_3_at_SMG7_5end
|association_with_transcript=-7bp_to_ENST00000456731,NM_001174061,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9887 | |EntrezGene=9887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16792 | |HGNC=16792 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCE5,B4DRB2,E9PCI0,Q92540,Q6TV06,E9PEH2 | |UniProt=E9PCE5,B4DRB2,E9PCI0,Q92540,Q6TV06,E9PEH2 | ||
|association_with_transcript=-7bp_to_ENST00000456731,NM_001174061,NM_173156,NM_201568,NM_201569_5end | |||
|cluster_id=chr1:183441471..183441498,+ | |||
|description=CAGE_peak_3_at_SMG7_5end | |||
|id=chr1:183441471..183441498,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.08e-08!140;CL:0000037!3.14e-07!172;CL:0000566!3.14e-07!172;CL:0002087!8.23e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-11!115;UBERON:0000073!8.49e-08!94;UBERON:0001016!8.49e-08!94;UBERON:0001869!1.89e-07!32;UBERON:0002619!4.11e-07!22;UBERON:0001893!6.97e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.29e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.69e-12,114;UBERON:0002619,5.43e-08,22;UBERON:0001869,6.69e-07,32;UBERON:0001950,9.32e-07,20 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.845726424575827,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0.791300934685361,0.123766352960047,0,0,0,0,0,1.47745269692145,1.22400414746552,0.313454721478088,0.85870796139317,0.410623275218653,0.502170558379211,1.29902789771517,1.23150884174919,1.02324015707783,3.54027849164014,1.15148819429164,2.01260960310899,0,0.90361775633475,1.84877005083394,0.852139206383318,0.853015394924529,0.587200878669695,1.10799081706375,1.20326668482085,1.30206522429511,1.11957737119962,1.29557466407592,1.03030227053675,1.16318591023652,0.755751887377619,0.727752183563449,1.62700325833979,0.822335776043652,1.23882548358041,0.575384784644301,1.2808035326455,0.709446689665756,0.344745680736619,1.93645405075148,2.70852973188684,1.69418105588344,0.818718450173537,0.898893937780338,0.612167784741805,0.641858054152187,0,0.989553900560148,0.997318288108159,0,1.7412554317715,0.56738522469114,1.24564449799115,1.25624332628372,1.0429658368404,1.08594422352558,0.605399502633369,0,1.58231193720442,0.633765858935825,0.637812899895131,0.209658645508376,1.01095768031846,1.80212271409808,2.25015821375912,0.570025487482497,1.9891667719909,1.0959849225878,1.75996244461323,2.18455444504853,1.77901850772711,1.28019066769952,0.800791974072025,1.14950487990897,1.32208974556972,0.954053754535364,0,0.587237189370939,0.764546456250458,1.32171328579026,1.12101712596307,1.58030450865046,1.37696839079683,0.786021525498329,1.02800749499755,0.668745981562712,0.977766799900771,0.946895611469467,0,1.55974639639243,1.17842362989935,0,1.35401931882508,1.28091319725675,0.910415432919148,0.657751618414705,0.276350017785848,0.579606171470105,0.444859689486181,1.60524496853828,1.04535523804977,1.0197840842781,1.53288197440768,0.68725489096526,1.26509846009751,1.27426165729639,0,0,2.55977702432214,1.02389288923535,0,1.65744076430812,0.821127996921047,1.00803371612366,1.33720097891754,1.15859523106239,0,1.34140171940727,0.255725123687061,0,0.50133791063589,0.289693037921647,0,0,0.661743720148475,1.10864698731282,0.87834785693126,3.47094550068939,1.82147644146271,0.741568885568859,1.29818957461873,1.21890816109487,0.797747763113191,0.476981248610684,2.85997455390064,0.74291500265913,0.39752481473341,0,0,1.13061588384802,0.419499436209906,0.825354125820202,0.835979866147242,0.775250277507987,1.06729878806013,0.66944122552934,0,0.760272105718513,0.24406205754817,0.367663080345869,0.81014194788176,1.3394959242612,2.69435247151404,1.23872628531654,1.53316637465883,0,0.732806975721629,1.31780417436063,0,0.872188104285069,0,0.633152558322899,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0.933633106199299,0.942974704487816,0.817309515567294,0.756787138224657,0,1.17160715916898,0.312160076830321,0.570471821544449,0,1.76151747965647,0.809364721840658,0.702254033511242,0.816616685019573,0.61417158655884,0.309977343527296,0,0.247266929278557,3.64064544775211,0.718618141816238,0.168336113954066,1.12606667884768,0.277064115484183,0.438977620880838,0.30648779579902,0.300476117813194,0.340296549480063,0.717558542755448,0,0,0.300091096084402,0.618315175430633,0,0,0.843881661206331,0.292311015483596,0.757301322732344,0.276149695926898,0.484938170456436,0,0.302256294682921,0.169560592310488,0.57978255948989,0.272746120590835,0.286804595389004,1.21973706129595,1.19276791489337,1.04574548582567,0.518305275076852,2.01856680700503,0.36497735907583,0,0,0,0,1.44375896333917,1.30137480043828,1.18009283054671,0.723033089650446,0.882351781859152,0.871517776369625,0.474541238222193,0.674156540800822,0.98110732562673,1.92373578473195,3.69077727312324,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,2.20731549707325,0.245976877086227,1.3725424823882,0.439001141634502,2.24803506515239,0.502644862058154,1.48141512253647,0.325808305310325,0,1.44331342025273,0.231860809950154,0.234817388471643,0.288732895522148,0,0.570762456703795,0.790204397959275,1.71697232418975,0.984868024349589,1.17002132569619,0.594524649154913,0,0,0.567100388969546,0.179117045405697,0.581267877027924,1.91691339582606,0.492663237895943,0.792435906119034,0.207328115540772,0.144119953416961,0.6312121671319,0.507983154337352,1.52795370223311,0,1.71072446022705,0.514137463516618,0.300343057843917,0.571652865261156,0.560655421726804,0,0.7333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0.771622122786426,5.67396528093113,0.799266537048298,0.285955987316295,0.542621605391443,0,0.325736184293735,0.355391948742546,0,1.20575750823834,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.821905290201534,0.716243852959582,1.79336230389644,0.985153801009636,0.862510299438069,1.15508732651774,0.76228387266739,1.30139853857622,0,0.502548796003046,0.637938751653163,2.24702107184155,2.99161459204025,1.65766205374414,0.12269149171914,0,0.542530047399471,0,0.178428988797162,0.315404830067869,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0.921845842708516,0.2606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| ||
|short_description=p3@SMG7 | |||
}} | }} |
Latest revision as of 03:16, 19 September 2015
Short description: | p3@SMG7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMG7_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000456731, NM_001174061, NM_173156, NM_201568, NM_201569_5end |
EntrezGene: | SMG7 |
HGNC: | 16792 |
UniProt: | E9PCE5B4DRB2E9PCI0Q92540Q6TV06E9PEH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.69e-12 | 114 |
regional part of cerebral cortex | 5.43e-08 | 22 |
cerebral hemisphere | 6.69e-07 | 32 |
neocortex | 9.32e-07 | 20 |